Code beautification with uncrustify

[alexxy/gromacs.git] / src / gromacs / trajectoryanalysis / analysismodule.cpp

diff --git a/src/gromacs/trajectoryanalysis/analysismodule.cpp b/src/gromacs/trajectoryanalysis/analysismodule.cpp
index 3370d3db26588561a2922e3f69c26d70b4d29122..5fe6f45234b7611a82458bb06e4b02de637338da 100644 (file)
--- a/src/gromacs/trajectoryanalysis/analysismodule.cpp
+++ b/src/gromacs/trajectoryanalysis/analysismodule.cpp
@@ -100,23 +100,23 @@ class TrajectoryAnalysisModuleData::Impl
     public:
         //! Container that associates a data handle to its AnalysisData object.
         typedef std::map<const AnalysisData *, AnalysisDataHandle>
-                HandleContainer;
+            HandleContainer;
 
         //! \copydoc TrajectoryAnalysisModuleData::TrajectoryAnalysisModuleData()
-        Impl(TrajectoryAnalysisModule *module,
+        Impl(TrajectoryAnalysisModule          *module,
              const AnalysisDataParallelOptions &opt,
-             const SelectionCollection &selections);
+             const SelectionCollection         &selections);
 
         //! Keeps a data handle for each AnalysisData object.
-        HandleContainer         handles_;
+        HandleContainer            handles_;
         //! Stores thread-local selections.
         const SelectionCollection &selections_;
 };
 
 TrajectoryAnalysisModuleData::Impl::Impl(
-        TrajectoryAnalysisModule *module,
+        TrajectoryAnalysisModule          *module,
         const AnalysisDataParallelOptions &opt,
-        const SelectionCollection &selections)
+        const SelectionCollection         &selections)
     : selections_(selections)
 {
     TrajectoryAnalysisModule::Impl::AnalysisDatasetContainer::const_iterator i;
@@ -133,9 +133,9 @@ TrajectoryAnalysisModuleData::Impl::Impl(
  */
 
 TrajectoryAnalysisModuleData::TrajectoryAnalysisModuleData(
-        TrajectoryAnalysisModule *module,
+        TrajectoryAnalysisModule          *module,
         const AnalysisDataParallelOptions &opt,
-        const SelectionCollection &selections)
+        const SelectionCollection         &selections)
     : impl_(new Impl(module, opt, selections))
 {
 }
@@ -179,10 +179,10 @@ SelectionList
 TrajectoryAnalysisModuleData::parallelSelections(const SelectionList &selections)
 {
     // TODO: Consider an implementation that does not allocate memory every time.
-    SelectionList newSelections;
+    SelectionList                 newSelections;
     newSelections.reserve(selections.size());
     SelectionList::const_iterator i = selections.begin();
-    for ( ; i != selections.end(); ++i)
+    for (; i != selections.end(); ++i)
     {
         newSelections.push_back(parallelSelection(*i));
     }
@@ -215,17 +215,17 @@ class TrajectoryAnalysisModuleDataBasic : public TrajectoryAnalysisModuleData
          * \param[in] opt        Data parallelization options.
          * \param[in] selections Thread-local selection collection.
          */
-        TrajectoryAnalysisModuleDataBasic(TrajectoryAnalysisModule *module,
+        TrajectoryAnalysisModuleDataBasic(TrajectoryAnalysisModule          *module,
                                           const AnalysisDataParallelOptions &opt,
-                                          const SelectionCollection &selections);
+                                          const SelectionCollection         &selections);
 
         virtual void finish();
 };
 
 TrajectoryAnalysisModuleDataBasic::TrajectoryAnalysisModuleDataBasic(
-        TrajectoryAnalysisModule *module,
+        TrajectoryAnalysisModule          *module,
         const AnalysisDataParallelOptions &opt,
-        const SelectionCollection &selections)
+        const SelectionCollection         &selections)
     : TrajectoryAnalysisModuleData(module, opt, selections)
 {
 }
@@ -237,7 +237,7 @@ TrajectoryAnalysisModuleDataBasic::finish()
     finishDataHandles();
 }
 
-} // namespace
+}   // namespace
 
 
 /********************************************************************
@@ -257,20 +257,20 @@ TrajectoryAnalysisModule::~TrajectoryAnalysisModule()
 
 
 void TrajectoryAnalysisModule::optionsFinished(
-        Options * /*options*/,
+        Options                    * /*options*/,
         TrajectoryAnalysisSettings * /*settings*/)
 {
 }
 
 
-void TrajectoryAnalysisModule::initAfterFirstFrame(const t_trxframe &/*fr*/)
+void TrajectoryAnalysisModule::initAfterFirstFrame(const t_trxframe & /*fr*/)
 {
 }
 
 
 TrajectoryAnalysisModuleDataPointer
 TrajectoryAnalysisModule::startFrames(const AnalysisDataParallelOptions &opt,
-                                      const SelectionCollection &selections)
+                                      const SelectionCollection         &selections)
 {
     return TrajectoryAnalysisModuleDataPointer(
             new TrajectoryAnalysisModuleDataBasic(this, opt, selections));
@@ -332,7 +332,7 @@ AbstractAnalysisData &TrajectoryAnalysisModule::datasetFromName(const char *name
 
 
 void TrajectoryAnalysisModule::registerBasicDataset(AbstractAnalysisData *data,
-                                                    const char *name)
+                                                    const char           *name)
 {
     // TODO: Strong exception safety should be possible to implement.
     GMX_RELEASE_ASSERT(impl_->datasets_.find(name) == impl_->datasets_.end(),
@@ -343,7 +343,7 @@ void TrajectoryAnalysisModule::registerBasicDataset(AbstractAnalysisData *data,
 
 
 void TrajectoryAnalysisModule::registerAnalysisDataset(AnalysisData *data,
-                                                       const char *name)
+                                                       const char   *name)
 {
     // TODO: Strong exception safety should be possible to implement.
     registerBasicDataset(data, name);