Sort all includes in src/gromacs

[alexxy/gromacs.git] / src / gromacs / gmxpreprocess / readir.c

diff --git a/src/gromacs/gmxpreprocess/readir.c b/src/gromacs/gmxpreprocess/readir.c
index b86bbef806e7f0a6317fe8900035573c4612b2d3..8f55b6c6609358dcc0d19c872e9da8e9fdb006d3 100644 (file)
--- a/src/gromacs/gmxpreprocess/readir.c
+++ b/src/gromacs/gmxpreprocess/readir.c
@@ -36,30 +36,30 @@
  */
 #include "gmxpre.h"
 
+#include "readir.h"
+
 #include <ctype.h>
 #include <limits.h>
 #include <stdlib.h>
 
-#include "gromacs/legacyheaders/typedefs.h"
-#include "gromacs/math/units.h"
-#include "gromacs/legacyheaders/names.h"
+#include "gromacs/gmxpreprocess/calc_verletbuf.h"
+#include "gromacs/gmxpreprocess/toputil.h"
+#include "gromacs/legacyheaders/chargegroup.h"
+#include "gromacs/legacyheaders/inputrec.h"
 #include "gromacs/legacyheaders/macros.h"
-#include "gromacs/topology/index.h"
-#include "gromacs/utility/cstringutil.h"
+#include "gromacs/legacyheaders/names.h"
+#include "gromacs/legacyheaders/network.h"
 #include "gromacs/legacyheaders/readinp.h"
+#include "gromacs/legacyheaders/typedefs.h"
 #include "gromacs/legacyheaders/warninp.h"
-#include "readir.h"
-#include "toputil.h"
-#include "gromacs/legacyheaders/network.h"
+#include "gromacs/math/units.h"
 #include "gromacs/math/vec.h"
 #include "gromacs/pbcutil/pbc.h"
-#include "gromacs/topology/mtop_util.h"
-#include "gromacs/legacyheaders/chargegroup.h"
-#include "gromacs/legacyheaders/inputrec.h"
-#include "calc_verletbuf.h"
-
 #include "gromacs/topology/block.h"
+#include "gromacs/topology/index.h"
+#include "gromacs/topology/mtop_util.h"
 #include "gromacs/topology/symtab.h"
+#include "gromacs/utility/cstringutil.h"
 #include "gromacs/utility/fatalerror.h"
 #include "gromacs/utility/smalloc.h"
 
@@ -3823,7 +3823,15 @@ static gmx_bool absolute_reference(t_inputrec *ir, gmx_mtop_t *sys,
                         case efbposresSPHERE:
                             AbsRef[XX] = AbsRef[YY] = AbsRef[ZZ] = 1;
                             break;
+                        case efbposresCYLINDERX:
+                            AbsRef[YY] = AbsRef[ZZ] = 1;
+                            break;
+                        case efbposresCYLINDERY:
+                            AbsRef[XX] = AbsRef[ZZ] = 1;
+                            break;
                         case efbposresCYLINDER:
+                        /* efbposres is a synonym for efbposresCYLINDERZ for backwards compatibility */
+                        case efbposresCYLINDERZ:
                             AbsRef[XX] = AbsRef[YY] = 1;
                             break;
                         case efbposresX: /* d=XX */