Remove unnecessary config.h includes

[alexxy/gromacs.git] / src / gromacs / gmxpreprocess / protonate.c

diff --git a/src/gromacs/gmxpreprocess/protonate.c b/src/gromacs/gmxpreprocess/protonate.c
index e2919aff57712bd00ab4c083f79e0c73def5f161..5f1d99f6fce8a97de85e82d2696333337f8fbe78 100644 (file)
--- a/src/gromacs/gmxpreprocess/protonate.c
+++ b/src/gromacs/gmxpreprocess/protonate.c
@@ -34,31 +34,31 @@
  * To help us fund GROMACS development, we humbly ask that you cite
  * the research papers on the package. Check out http://www.gromacs.org.
  */
-#include "protonate.h"
+#include "gmxpre.h"
 
-#ifdef HAVE_CONFIG_H
-#include <config.h>
-#endif
+#include "protonate.h"
 
 #include <math.h>
-#include "string2.h"
-#include "typedefs.h"
-#include "macros.h"
-#include "smalloc.h"
+#include "gromacs/utility/cstringutil.h"
+#include "gromacs/legacyheaders/typedefs.h"
+#include "gromacs/legacyheaders/macros.h"
+#include "gromacs/utility/smalloc.h"
 #include "gromacs/commandline/pargs.h"
 #include "gromacs/fileio/confio.h"
 #include "genhydro.h"
 #include "gromacs/fileio/tpxio.h"
 #include "gromacs/fileio/trxio.h"
-#include "index.h"
-#include "vec.h"
+#include "gromacs/topology/index.h"
+#include "gromacs/math/vec.h"
 #include "hackblock.h"
 
+#include "gromacs/utility/fatalerror.h"
+
 int gmx_protonate(int argc, char *argv[])
 {
     const char     *desc[] = {
         "[THISMODULE] reads (a) conformation(s) and adds all missing",
-        "hydrogens as defined in [TT]gmx2.ff/aminoacids.hdb[tt]. If only [TT]-s[tt] is",
+        "hydrogens as defined in [TT]oplsaa.ff/aminoacids.hdb[tt]. If only [TT]-s[tt] is",
         "specified, this conformation will be protonated, if also [TT]-f[tt]",
         "is specified, the conformation(s) will be read from this file, ",
         "which can be either a single conformation or a trajectory.",