From 32c8fcc1dcd614881c5ccb141cad7f21b660c347 Mon Sep 17 00:00:00 2001 From: Mark Abraham Date: Thu, 21 Oct 2021 09:11:40 +0000 Subject: [PATCH] Refactor PME tests for better usability Now there is a human-understandable name for the tests, and (where possible) the input for each test is declarative rather than procedural. --- src/gromacs/ewald/tests/pmegathertest.cpp | 396 +++++++++--------- src/gromacs/ewald/tests/pmesolvetest.cpp | 183 ++++---- .../ewald/tests/pmesplinespreadtest.cpp | 258 ++++++------ src/gromacs/ewald/tests/pmetestcommon.cpp | 35 +- src/gromacs/ewald/tests/pmetestcommon.h | 15 +- ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...s_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} | 0 ...5_11_gridvalues_first_system_13_atoms.xml} | 0 ..._15_11_gridvalues_first_system_1_atom.xml} | 0 ...15_11_gridvalues_first_system_2_atoms.xml} | 0 ..._11_gridvalues_second_system_13_atoms.xml} | 0 ...15_11_gridvalues_second_system_1_atom.xml} | 0 ...5_11_gridvalues_second_system_2_atoms.xml} | 0 ...2_14_gridvalues_first_system_13_atoms.xml} | 0 ..._12_14_gridvalues_first_system_1_atom.xml} | 0 ...12_14_gridvalues_first_system_2_atoms.xml} | 0 ..._14_gridvalues_second_system_13_atoms.xml} | 0 ...12_14_gridvalues_second_system_1_atom.xml} | 0 ...2_14_gridvalues_second_system_2_atoms.xml} | 0 ...5_11_gridvalues_first_system_13_atoms.xml} | 0 ..._15_11_gridvalues_first_system_1_atom.xml} | 2 +- ...15_11_gridvalues_first_system_2_atoms.xml} | 0 ..._11_gridvalues_second_system_13_atoms.xml} | 0 ...15_11_gridvalues_second_system_1_atom.xml} | 0 ...5_11_gridvalues_second_system_2_atoms.xml} | 0 ...2_14_gridvalues_first_system_13_atoms.xml} | 0 ..._12_14_gridvalues_first_system_1_atom.xml} | 2 +- ...12_14_gridvalues_first_system_2_atoms.xml} | 0 ..._14_gridvalues_second_system_13_atoms.xml} | 0 ...12_14_gridvalues_second_system_1_atom.xml} | 0 ...2_14_gridvalues_second_system_2_atoms.xml} | 0 ...5_11_gridvalues_first_system_13_atoms.xml} | 2 +- ..._15_11_gridvalues_first_system_1_atom.xml} | 0 ...15_11_gridvalues_first_system_2_atoms.xml} | 0 ..._11_gridvalues_second_system_13_atoms.xml} | 0 ...15_11_gridvalues_second_system_1_atom.xml} | 2 +- ...5_11_gridvalues_second_system_2_atoms.xml} | 0 ...2_14_gridvalues_first_system_13_atoms.xml} | 2 +- ..._12_14_gridvalues_first_system_1_atom.xml} | 0 ...12_14_gridvalues_first_system_2_atoms.xml} | 0 ..._14_gridvalues_second_system_13_atoms.xml} | 0 ...12_14_gridvalues_second_system_1_atom.xml} | 2 +- ...2_14_gridvalues_second_system_2_atoms.xml} | 0 ...5_11_gridvalues_first_system_13_atoms.xml} | 0 ..._15_11_gridvalues_first_system_1_atom.xml} | 0 ...15_11_gridvalues_first_system_2_atoms.xml} | 0 ..._11_gridvalues_second_system_13_atoms.xml} | 0 ...15_11_gridvalues_second_system_1_atom.xml} | 0 ...5_11_gridvalues_second_system_2_atoms.xml} | 0 ...2_14_gridvalues_first_system_13_atoms.xml} | 0 ..._12_14_gridvalues_first_system_1_atom.xml} | 0 ...12_14_gridvalues_first_system_2_atoms.xml} | 0 ..._14_gridvalues_second_system_13_atoms.xml} | 0 ...12_14_gridvalues_second_system_1_atom.xml} | 0 ...2_14_gridvalues_second_system_2_atoms.xml} | 0 ...5_11_gridvalues_first_system_13_atoms.xml} | 0 ..._15_11_gridvalues_first_system_1_atom.xml} | 4 +- ...15_11_gridvalues_first_system_2_atoms.xml} | 0 ..._11_gridvalues_second_system_13_atoms.xml} | 0 ...15_11_gridvalues_second_system_1_atom.xml} | 0 ...5_11_gridvalues_second_system_2_atoms.xml} | 0 ...2_14_gridvalues_first_system_13_atoms.xml} | 0 ..._12_14_gridvalues_first_system_1_atom.xml} | 4 +- ...12_14_gridvalues_first_system_2_atoms.xml} | 0 ..._14_gridvalues_second_system_13_atoms.xml} | 0 ...12_14_gridvalues_second_system_1_atom.xml} | 0 ...2_14_gridvalues_second_system_2_atoms.xml} | 0 ...5_11_gridvalues_first_system_13_atoms.xml} | 0 ..._15_11_gridvalues_first_system_1_atom.xml} | 0 ...15_11_gridvalues_first_system_2_atoms.xml} | 0 ..._11_gridvalues_second_system_13_atoms.xml} | 0 ...15_11_gridvalues_second_system_1_atom.xml} | 2 +- ...5_11_gridvalues_second_system_2_atoms.xml} | 0 ...2_14_gridvalues_first_system_13_atoms.xml} | 0 ..._12_14_gridvalues_first_system_1_atom.xml} | 0 ...12_14_gridvalues_first_system_2_atoms.xml} | 0 ..._14_gridvalues_second_system_13_atoms.xml} | 0 ...12_14_gridvalues_second_system_1_atom.xml} | 2 +- ...2_14_gridvalues_second_system_2_atoms.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} | 0 ...ps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} | 0 ...order_3_grid_16_12_14_system_13_atoms.xml} | 0 ...t_order_3_grid_16_12_14_system_1_atom.xml} | 0 ..._order_3_grid_16_12_14_system_2_atoms.xml} | 0 ...order_3_grid_19_17_11_system_13_atoms.xml} | 0 ...t_order_3_grid_19_17_11_system_1_atom.xml} | 0 ..._order_3_grid_19_17_11_system_2_atoms.xml} | 0 ...order_4_grid_16_12_14_system_13_atoms.xml} | 0 ...t_order_4_grid_16_12_14_system_1_atom.xml} | 0 ..._order_4_grid_16_12_14_system_2_atoms.xml} | 0 ...order_4_grid_19_17_11_system_13_atoms.xml} | 0 ...t_order_4_grid_19_17_11_system_1_atom.xml} | 0 ..._order_4_grid_19_17_11_system_2_atoms.xml} | 0 ...order_5_grid_16_12_14_system_13_atoms.xml} | 0 ...t_order_5_grid_16_12_14_system_1_atom.xml} | 0 ..._order_5_grid_16_12_14_system_2_atoms.xml} | 0 ...order_5_grid_19_17_11_system_13_atoms.xml} | 0 ...t_order_5_grid_19_17_11_system_1_atom.xml} | 0 ..._order_5_grid_19_17_11_system_2_atoms.xml} | 0 ...order_3_grid_16_12_14_system_13_atoms.xml} | 0 ...c_order_3_grid_16_12_14_system_1_atom.xml} | 0 ..._order_3_grid_16_12_14_system_2_atoms.xml} | 0 ...order_3_grid_19_17_11_system_13_atoms.xml} | 0 ...c_order_3_grid_19_17_11_system_1_atom.xml} | 0 ..._order_3_grid_19_17_11_system_2_atoms.xml} | 0 ...order_4_grid_16_12_14_system_13_atoms.xml} | 0 ...c_order_4_grid_16_12_14_system_1_atom.xml} | 0 ..._order_4_grid_16_12_14_system_2_atoms.xml} | 0 ...order_4_grid_19_17_11_system_13_atoms.xml} | 0 ...c_order_4_grid_19_17_11_system_1_atom.xml} | 0 ..._order_4_grid_19_17_11_system_2_atoms.xml} | 0 ...order_5_grid_16_12_14_system_13_atoms.xml} | 0 ...c_order_5_grid_16_12_14_system_1_atom.xml} | 0 ..._order_5_grid_16_12_14_system_2_atoms.xml} | 0 ...order_5_grid_19_17_11_system_13_atoms.xml} | 0 ...c_order_5_grid_19_17_11_system_1_atom.xml} | 0 ..._order_5_grid_19_17_11_system_2_atoms.xml} | 0 161 files changed, 479 insertions(+), 432 deletions(-) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_0.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_1.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_2.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_3.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_4.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_5.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_6.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_7.xml => PmeDiffEps_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_8.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_9.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_10.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_11.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_12.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_13.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_14.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_15.xml => PmeDiffEps_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_0.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_1.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_2.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_3.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_4.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_5.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_6.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_7.xml => PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_0.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_1.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_2.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_3.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_4.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_5.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_6.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_7.xml => PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_8.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_6.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_7.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_11.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_9.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_10.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_2.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_0.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_1.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_5.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_3.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_4.xml => Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_20.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_18.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml} (86%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_19.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_23.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_21.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_22.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_14.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_12.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml} (86%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_13.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_17.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_15.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_16.xml => Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_32.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_13_atoms.xml} (97%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_30.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_31.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_35.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_33.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml} (86%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_34.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_26.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_13_atoms.xml} (97%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_24.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_25.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_29.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_27.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml} (86%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_28.xml => Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_44.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_42.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_43.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_47.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_45.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_46.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_38.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_36.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_37.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_41.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_39.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_40.xml => Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_56.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_54.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml} (73%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_55.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_59.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_57.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_58.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_50.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_48.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml} (73%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_49.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_53.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_51.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_52.xml => Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_68.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_66.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_67.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_71.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_69.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml} (86%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_70.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_62.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_60.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_61.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_65.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_63.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml} (86%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeGatherTest_ReproducesOutputs_64.xml => Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_0.xml => Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_1.xml => Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_2.xml => Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_3.xml => Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_4.xml => Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_5.xml => Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_6.xml => Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_7.xml => Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_8.xml => Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_9.xml => Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_10.xml => Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_11.xml => Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_12.xml => Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_13.xml => Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_14.xml => Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput_PmeSolveTest_ReproducesOutputs_15.xml => Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml => Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_2_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_13_atoms.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_1_atom.xml} (100%) rename src/gromacs/ewald/tests/refdata/{SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml => Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_2_atoms.xml} (100%) diff --git a/src/gromacs/ewald/tests/pmegathertest.cpp b/src/gromacs/ewald/tests/pmegathertest.cpp index 444ff904cf..f3921e005b 100644 --- a/src/gromacs/ewald/tests/pmegathertest.cpp +++ b/src/gromacs/ewald/tests/pmegathertest.cpp @@ -37,6 +37,7 @@ * Implements PME force gathering tests. * * \author Aleksei Iupinov + * \author Mark Abraham * \ingroup module_ewald */ @@ -62,111 +63,118 @@ namespace test namespace { -/* Valid input instances */ - -//! A couple of valid inputs for boxes. -std::vector const c_sampleBoxes{ - // normal box - Matrix3x3{ { 8.0F, 0.0F, 0.0F, 0.0F, 3.4F, 0.0F, 0.0F, 0.0F, 2.0F } }, - // triclinic box - Matrix3x3{ { 7.0F, 0.0F, 0.0F, 0.0F, 4.1F, 0.0F, 3.5F, 2.0F, 12.2F } }, -}; - //! A couple of valid inputs for grid sizes -std::vector const c_sampleGridSizes{ IVec{ 16, 12, 14 }, IVec{ 13, 15, 11 } }; -//! Random charges -std::vector const c_sampleChargesFull{ 4.95F, 3.11F, 3.97F, 1.08F, 2.09F, 1.1F, - 4.13F, 3.31F, 2.8F, 5.83F, 5.09F, 6.1F, - 2.86F, 0.24F, 5.76F, 5.19F, 0.72F }; - -//! All the input atom gridline indices -std::vector const c_sampleGridLineIndicesFull{ - IVec{ 4, 2, 6 }, IVec{ 1, 4, 10 }, IVec{ 0, 6, 6 }, IVec{ 0, 1, 4 }, IVec{ 6, 3, 0 }, - IVec{ 7, 2, 2 }, IVec{ 8, 3, 1 }, IVec{ 4, 0, 3 }, IVec{ 0, 0, 0 }, IVec{ 8, 5, 8 }, - IVec{ 4, 4, 2 }, IVec{ 7, 1, 7 }, IVec{ 8, 5, 5 }, IVec{ 2, 6, 5 }, IVec{ 1, 6, 2 }, - IVec{ 7, 1, 8 }, IVec{ 3, 5, 1 }, -}; +std::vector const c_inputGridSizes{ IVec{ 16, 12, 14 }, IVec{ 13, 15, 11 } }; -// Spline values/derivatives below are also generated randomly, so they are bogus, -// but that should not affect the reproducibility, which we're after - -//! A lot of bogus input spline values - should have at list (max PME order = 5) * (DIM = 3) * (total unique atom number in all test cases = 16) values -std::vector const c_sampleSplineValuesFull{ - 0.12F, 0.81F, 0.29F, 0.22F, 0.13F, 0.19F, 0.12F, 0.8F, 0.44F, 0.38F, 0.32F, 0.36F, 0.27F, - 0.11F, 0.17F, 0.94F, 0.07F, 0.9F, 0.98F, 0.96F, 0.07F, 0.94F, 0.77F, 0.24F, 0.84F, 0.16F, - 0.77F, 0.57F, 0.52F, 0.27F, 0.39F, 0.45F, 0.6F, 0.59F, 0.44F, 0.91F, 0.97F, 0.43F, 0.24F, - 0.52F, 0.73F, 0.55F, 0.99F, 0.39F, 0.97F, 0.35F, 0.1F, 0.68F, 0.19F, 0.1F, 0.77F, 0.2F, - 0.43F, 0.69F, 0.76F, 0.32F, 0.31F, 0.94F, 0.53F, 0.6F, 0.93F, 0.57F, 0.94F, 0.88F, 0.75F, - 0.77F, 0.91F, 0.72F, 0.07F, 0.78F, 0.09F, 0.02F, 0.48F, 0.97F, 0.89F, 0.39F, 0.48F, 0.19F, - 0.02F, 0.92F, 0.8F, 0.41F, 0.53F, 0.32F, 0.38F, 0.58F, 0.36F, 0.46F, 0.92F, 0.91F, 0.01F, - 0.86F, 0.54F, 0.86F, 0.94F, 0.37F, 0.35F, 0.81F, 0.89F, 0.48F, 0.34F, 0.18F, 0.11F, 0.02F, - 0.87F, 0.95F, 0.66F, 0.67F, 0.38F, 0.45F, 0.04F, 0.94F, 0.54F, 0.76F, 0.58F, 0.83F, 0.31F, - 0.73F, 0.71F, 0.06F, 0.35F, 0.32F, 0.35F, 0.61F, 0.27F, 0.98F, 0.83F, 0.11F, 0.3F, 0.42F, - 0.95F, 0.69F, 0.58F, 0.29F, 0.1F, 0.68F, 0.94F, 0.62F, 0.51F, 0.47F, 0.04F, 0.47F, 0.34F, - 0.71F, 0.52F, 0.19F, 0.69F, 0.5F, 0.59F, 0.05F, 0.74F, 0.11F, 0.4F, 0.81F, 0.24F, 0.53F, - 0.71F, 0.07F, 0.17F, 0.41F, 0.23F, 0.78F, 0.27F, 0.1F, 0.71F, 0.36F, 0.67F, 0.6F, 0.94F, - 0.69F, 0.19F, 0.58F, 0.68F, 0.5F, 0.62F, 0.38F, 0.29F, 0.44F, 0.04F, 0.89F, 0.0F, 0.76F, - 0.22F, 0.16F, 0.08F, 0.62F, 0.51F, 0.62F, 0.83F, 0.72F, 0.96F, 0.99F, 0.4F, 0.79F, 0.83F, - 0.21F, 0.43F, 0.32F, 0.44F, 0.72F, 0.21F, 0.4F, 0.93F, 0.07F, 0.11F, 0.41F, 0.24F, 0.04F, - 0.36F, 0.15F, 0.92F, 0.08F, 0.99F, 0.35F, 0.42F, 0.7F, 0.17F, 0.39F, 0.69F, 0.0F, 0.86F, - 0.89F, 0.59F, 0.81F, 0.77F, 0.15F, 0.89F, 0.17F, 0.76F, 0.67F, 0.58F, 0.78F, 0.26F, 0.19F, - 0.69F, 0.18F, 0.46F, 0.6F, 0.69F, 0.23F, 0.34F, 0.3F, 0.64F, 0.34F, 0.6F, 0.99F, 0.69F, - 0.57F, 0.75F, 0.07F, 0.36F, 0.75F, 0.81F, 0.8F, 0.42F, 0.09F, 0.94F, 0.66F, 0.35F, 0.67F, - 0.34F, 0.66F, 0.02F, 0.47F, 0.78F, 0.21F, 0.02F, 0.18F, 0.42F, 0.2F, 0.46F, 0.34F, 0.4F, - 0.46F, 0.96F, 0.86F, 0.25F, 0.25F, 0.22F, 0.37F, 0.59F, 0.19F, 0.45F, 0.61F, 0.04F, 0.71F, - 0.77F, 0.51F, 0.77F, 0.15F, 0.78F, 0.36F, 0.62F, 0.24F, 0.86F, 0.2F, 0.77F, 0.08F, 0.09F, - 0.3F, 0.0F, 0.6F, 0.99F, 0.69F, +//! A structure for all the spline data which depends in size both on the PME order and atom count +struct SplineData +{ + //! Spline values + SplineParamsVector splineValues; + //! Spline derivatives + SplineParamsVector splineDerivatives; }; -//! A lot of bogus input spline derivatives - should have at list (max PME order = 5) * (DIM = 3) * (total unique atom number in all test cases = 16) values -std::vector const c_sampleSplineDerivativesFull{ - 0.82F, 0.88F, 0.83F, 0.11F, 0.93F, 0.32F, 0.71F, 0.37F, 0.69F, 0.88F, 0.11F, 0.38F, 0.25F, - 0.5F, 0.36F, 0.81F, 0.78F, 0.31F, 0.66F, 0.32F, 0.27F, 0.35F, 0.53F, 0.83F, 0.08F, 0.08F, - 0.94F, 0.71F, 0.65F, 0.24F, 0.13F, 0.01F, 0.33F, 0.65F, 0.24F, 0.53F, 0.45F, 0.84F, 0.33F, - 0.97F, 0.31F, 0.7F, 0.03F, 0.31F, 0.41F, 0.76F, 0.12F, 0.3F, 0.57F, 0.65F, 0.87F, 0.99F, - 0.42F, 0.97F, 0.32F, 0.39F, 0.73F, 0.23F, 0.03F, 0.67F, 0.97F, 0.57F, 0.42F, 0.38F, 0.54F, - 0.17F, 0.53F, 0.54F, 0.18F, 0.8F, 0.76F, 0.13F, 0.29F, 0.83F, 0.77F, 0.56F, 0.4F, 0.87F, - 0.36F, 0.18F, 0.59F, 0.04F, 0.05F, 0.61F, 0.26F, 0.91F, 0.62F, 0.16F, 0.89F, 0.23F, 0.26F, - 0.59F, 0.33F, 0.2F, 0.49F, 0.41F, 0.25F, 0.4F, 0.16F, 0.83F, 0.44F, 0.82F, 0.21F, 0.95F, - 0.14F, 0.8F, 0.37F, 0.31F, 0.41F, 0.53F, 0.15F, 0.85F, 0.78F, 0.17F, 0.92F, 0.03F, 0.13F, - 0.2F, 0.03F, 0.33F, 0.87F, 0.38F, 0, 0.08F, 0.79F, 0.36F, 0.53F, 0.05F, 0.07F, 0.94F, - 0.23F, 0.85F, 0.13F, 0.27F, 0.23F, 0.22F, 0.26F, 0.38F, 0.15F, 0.48F, 0.18F, 0.33F, 0.23F, - 0.62F, 0.1F, 0.36F, 0.99F, 0.07F, 0.02F, 0.04F, 0.09F, 0.29F, 0.52F, 0.29F, 0.83F, 0.97F, - 0.61F, 0.81F, 0.49F, 0.56F, 0.08F, 0.09F, 0.03F, 0.65F, 0.46F, 0.1F, 0.06F, 0.06F, 0.39F, - 0.29F, 0.04F, 0.03F, 0.1F, 0.83F, 0.94F, 0.59F, 0.97F, 0.82F, 0.2F, 0.66F, 0.23F, 0.11F, - 0.03F, 0.16F, 0.27F, 0.53F, 0.94F, 0.46F, 0.43F, 0.29F, 0.97F, 0.64F, 0.46F, 0.37F, 0.43F, - 0.48F, 0.37F, 0.93F, 0.5F, 0.2F, 0.92F, 0.09F, 0.74F, 0.55F, 0.44F, 0.05F, 0.13F, 0.17F, - 0.79F, 0.44F, 0.11F, 0.6F, 0.64F, 0.05F, 0.96F, 0.3F, 0.45F, 0.47F, 0.42F, 0.74F, 0.91F, - 0.06F, 0.89F, 0.24F, 0.26F, 0.68F, 0.4F, 0.88F, 0.5F, 0.65F, 0.48F, 0.15F, 0.0F, 0.41F, - 0.67F, 0.4F, 0.31F, 0.73F, 0.77F, 0.36F, 0.26F, 0.74F, 0.46F, 0.56F, 0.78F, 0.92F, 0.32F, - 0.9F, 0.06F, 0.55F, 0.6F, 0.13F, 0.38F, 0.93F, 0.5F, 0.92F, 0.96F, 0.82F, 0.0F, 0.04F, - 0.9F, 0.55F, 0.97F, 1.0F, 0.23F, 0.46F, 0.52F, 0.49F, 0.0F, 0.32F, 0.16F, 0.4F, 0.62F, - 0.36F, 0.03F, 0.63F, 0.16F, 0.58F, 0.97F, 0.03F, 0.44F, 0.07F, 0.22F, 0.75F, 0.32F, 0.61F, - 0.94F, 0.33F, 0.7F, 0.57F, 0.5F, 0.84F, 0.7F, 0.47F, 0.18F, 0.09F, 0.25F, 0.77F, 0.94F, - 0.85F, 0.09F, 0.83F, 0.02F, 0.91F, -}; +//! Return synthetic spline data to gather +SplineData getSplineData(const int pmeOrder, const int atomCount) +{ + // Spline values/derivatives below are also generated randomly, so + // they are bogus, but that should not affect the reproducibility, + // which is what we're after. + + //! A lot of random input spline values - should have at least (max PME order = 5) * (DIM = 3) * (total unique atom number in all test cases = 13) values + static const std::vector s_sampleSplineValuesFull{ + 0.12F, 0.81F, 0.29F, 0.22F, 0.13F, 0.19F, 0.12F, 0.8F, 0.44F, 0.38F, 0.32F, 0.36F, 0.27F, + 0.11F, 0.17F, 0.94F, 0.07F, 0.9F, 0.98F, 0.96F, 0.07F, 0.94F, 0.77F, 0.24F, 0.84F, 0.16F, + 0.77F, 0.57F, 0.52F, 0.27F, 0.39F, 0.45F, 0.6F, 0.59F, 0.44F, 0.91F, 0.97F, 0.43F, 0.24F, + 0.52F, 0.73F, 0.55F, 0.99F, 0.39F, 0.97F, 0.35F, 0.1F, 0.68F, 0.19F, 0.1F, 0.77F, 0.2F, + 0.43F, 0.69F, 0.76F, 0.32F, 0.31F, 0.94F, 0.53F, 0.6F, 0.93F, 0.57F, 0.94F, 0.88F, 0.75F, + 0.77F, 0.91F, 0.72F, 0.07F, 0.78F, 0.09F, 0.02F, 0.48F, 0.97F, 0.89F, 0.39F, 0.48F, 0.19F, + 0.02F, 0.92F, 0.8F, 0.41F, 0.53F, 0.32F, 0.38F, 0.58F, 0.36F, 0.46F, 0.92F, 0.91F, 0.01F, + 0.86F, 0.54F, 0.86F, 0.94F, 0.37F, 0.35F, 0.81F, 0.89F, 0.48F, 0.34F, 0.18F, 0.11F, 0.02F, + 0.87F, 0.95F, 0.66F, 0.67F, 0.38F, 0.45F, 0.04F, 0.94F, 0.54F, 0.76F, 0.58F, 0.83F, 0.31F, + 0.73F, 0.71F, 0.06F, 0.35F, 0.32F, 0.35F, 0.61F, 0.27F, 0.98F, 0.83F, 0.11F, 0.3F, 0.42F, + 0.95F, 0.69F, 0.58F, 0.29F, 0.1F, 0.68F, 0.94F, 0.62F, 0.51F, 0.47F, 0.04F, 0.47F, 0.34F, + 0.71F, 0.52F, 0.19F, 0.69F, 0.5F, 0.59F, 0.05F, 0.74F, 0.11F, 0.4F, 0.81F, 0.24F, 0.53F, + 0.71F, 0.07F, 0.17F, 0.41F, 0.23F, 0.78F, 0.27F, 0.1F, 0.71F, 0.36F, 0.67F, 0.6F, 0.94F, + 0.69F, 0.19F, 0.58F, 0.68F, 0.5F, 0.62F, 0.38F, 0.29F, 0.44F, 0.04F, 0.89F, 0.0F, 0.76F, + 0.22F, 0.16F, 0.08F, 0.62F, 0.51F, 0.62F, 0.83F, 0.72F, 0.96F, 0.99F, 0.4F, 0.79F, 0.83F, + 0.21F, 0.43F, 0.32F, 0.44F, 0.72F, 0.21F, 0.4F, 0.93F, 0.07F, 0.11F, 0.41F, 0.24F, 0.04F, + 0.36F, 0.15F, 0.92F, 0.08F, 0.99F, 0.35F, 0.42F, 0.7F, 0.17F, 0.39F, 0.69F, 0.0F, 0.86F, + 0.89F, 0.59F, 0.81F, 0.77F, 0.15F, 0.89F, 0.17F, 0.76F, 0.67F, 0.58F, 0.78F, 0.26F, 0.19F, + 0.69F, 0.18F, 0.46F, 0.6F, 0.69F, 0.23F, 0.34F, 0.3F, 0.64F, 0.34F, 0.6F, 0.99F, 0.69F, + 0.57F, 0.75F, 0.07F, 0.36F, 0.75F, 0.81F, 0.8F, 0.42F, 0.09F, 0.94F, 0.66F, 0.35F, 0.67F, + 0.34F, 0.66F, 0.02F, 0.47F, 0.78F, 0.21F, 0.02F, 0.18F, 0.42F, 0.2F, 0.46F, 0.34F, 0.4F, + 0.46F, 0.96F, 0.86F, 0.25F, 0.25F, 0.22F, 0.37F, 0.59F, 0.19F, 0.45F, 0.61F, 0.04F, 0.71F, + 0.77F, 0.51F, 0.77F, 0.15F, 0.78F, 0.36F, 0.62F, 0.24F, 0.86F, 0.2F, 0.77F, 0.08F, 0.09F, + 0.3F, 0.0F, 0.6F, 0.99F, 0.69F, + }; + + //! A lot of random input spline derivatives - should have at least (max PME order = 5) * (DIM = 3) * (total unique atom number in all test cases = 13) values + static const std::vector s_sampleSplineDerivativesFull{ + 0.82F, 0.88F, 0.83F, 0.11F, 0.93F, 0.32F, 0.71F, 0.37F, 0.69F, 0.88F, 0.11F, 0.38F, 0.25F, + 0.5F, 0.36F, 0.81F, 0.78F, 0.31F, 0.66F, 0.32F, 0.27F, 0.35F, 0.53F, 0.83F, 0.08F, 0.08F, + 0.94F, 0.71F, 0.65F, 0.24F, 0.13F, 0.01F, 0.33F, 0.65F, 0.24F, 0.53F, 0.45F, 0.84F, 0.33F, + 0.97F, 0.31F, 0.7F, 0.03F, 0.31F, 0.41F, 0.76F, 0.12F, 0.3F, 0.57F, 0.65F, 0.87F, 0.99F, + 0.42F, 0.97F, 0.32F, 0.39F, 0.73F, 0.23F, 0.03F, 0.67F, 0.97F, 0.57F, 0.42F, 0.38F, 0.54F, + 0.17F, 0.53F, 0.54F, 0.18F, 0.8F, 0.76F, 0.13F, 0.29F, 0.83F, 0.77F, 0.56F, 0.4F, 0.87F, + 0.36F, 0.18F, 0.59F, 0.04F, 0.05F, 0.61F, 0.26F, 0.91F, 0.62F, 0.16F, 0.89F, 0.23F, 0.26F, + 0.59F, 0.33F, 0.2F, 0.49F, 0.41F, 0.25F, 0.4F, 0.16F, 0.83F, 0.44F, 0.82F, 0.21F, 0.95F, + 0.14F, 0.8F, 0.37F, 0.31F, 0.41F, 0.53F, 0.15F, 0.85F, 0.78F, 0.17F, 0.92F, 0.03F, 0.13F, + 0.2F, 0.03F, 0.33F, 0.87F, 0.38F, 0, 0.08F, 0.79F, 0.36F, 0.53F, 0.05F, 0.07F, 0.94F, + 0.23F, 0.85F, 0.13F, 0.27F, 0.23F, 0.22F, 0.26F, 0.38F, 0.15F, 0.48F, 0.18F, 0.33F, 0.23F, + 0.62F, 0.1F, 0.36F, 0.99F, 0.07F, 0.02F, 0.04F, 0.09F, 0.29F, 0.52F, 0.29F, 0.83F, 0.97F, + 0.61F, 0.81F, 0.49F, 0.56F, 0.08F, 0.09F, 0.03F, 0.65F, 0.46F, 0.1F, 0.06F, 0.06F, 0.39F, + 0.29F, 0.04F, 0.03F, 0.1F, 0.83F, 0.94F, 0.59F, 0.97F, 0.82F, 0.2F, 0.66F, 0.23F, 0.11F, + 0.03F, 0.16F, 0.27F, 0.53F, 0.94F, 0.46F, 0.43F, 0.29F, 0.97F, 0.64F, 0.46F, 0.37F, 0.43F, + 0.48F, 0.37F, 0.93F, 0.5F, 0.2F, 0.92F, 0.09F, 0.74F, 0.55F, 0.44F, 0.05F, 0.13F, 0.17F, + 0.79F, 0.44F, 0.11F, 0.6F, 0.64F, 0.05F, 0.96F, 0.3F, 0.45F, 0.47F, 0.42F, 0.74F, 0.91F, + 0.06F, 0.89F, 0.24F, 0.26F, 0.68F, 0.4F, 0.88F, 0.5F, 0.65F, 0.48F, 0.15F, 0.0F, 0.41F, + 0.67F, 0.4F, 0.31F, 0.73F, 0.77F, 0.36F, 0.26F, 0.74F, 0.46F, 0.56F, 0.78F, 0.92F, 0.32F, + 0.9F, 0.06F, 0.55F, 0.6F, 0.13F, 0.38F, 0.93F, 0.5F, 0.92F, 0.96F, 0.82F, 0.0F, 0.04F, + 0.9F, 0.55F, 0.97F, 1.0F, 0.23F, 0.46F, 0.52F, 0.49F, 0.0F, 0.32F, 0.16F, 0.4F, 0.62F, + 0.36F, 0.03F, 0.63F, 0.16F, 0.58F, 0.97F, 0.03F, 0.44F, 0.07F, 0.22F, 0.75F, 0.32F, 0.61F, + 0.94F, 0.33F, 0.7F, 0.57F, 0.5F, 0.84F, 0.7F, 0.47F, 0.18F, 0.09F, 0.25F, 0.77F, 0.94F, + 0.85F, 0.09F, 0.83F, 0.02F, 0.91F, + }; + + SplineData splineData; + const int dimSize = atomCount * pmeOrder; + for (int dimIndex = 0; dimIndex < DIM; dimIndex++) + { + splineData.splineValues[dimIndex] = + SplineParamsDimVector(s_sampleSplineValuesFull).subArray(dimIndex * dimSize, dimSize); + splineData.splineDerivatives[dimIndex] = + SplineParamsDimVector(s_sampleSplineDerivativesFull).subArray(dimIndex * dimSize, dimSize); + } + return splineData; +} -//! 2 c_sample grids - only non-zero values have to be listed -std::vector const c_sampleGrids{ SparseRealGridValuesInput{ - { IVec{ 0, 0, 0 }, 3.5F }, - { IVec{ 7, 0, 0 }, -2.5F }, - { IVec{ 3, 5, 7 }, -0.006F }, - { IVec{ 1, 6, 7 }, -2.76F }, - { IVec{ 3, 1, 2 }, 0.6F }, - { IVec{ 6, 2, 4 }, 7.1F }, - { IVec{ 4, 5, 6 }, 4.1F }, - { IVec{ 4, 4, 6 }, -3.7F }, - }, - SparseRealGridValuesInput{ - { IVec{ 0, 4, 0 }, 6.F }, - { IVec{ 4, 2, 7 }, 13.76F }, - { IVec{ 0, 6, 7 }, 3.6F }, - { IVec{ 3, 2, 8 }, 0.61F }, - { IVec{ 5, 4, 3 }, 2.1F }, - { IVec{ 2, 5, 10 }, 3.6F }, - { IVec{ 5, 3, 6 }, 2.1F }, - { IVec{ 6, 6, 6 }, 6.1F }, - } }; +//! Two input grids - only non-zero values have to be listed +const std::map c_inputGrids = { + { "first", + SparseRealGridValuesInput{ + { IVec{ 0, 0, 0 }, 3.5F }, + { IVec{ 7, 0, 0 }, -2.5F }, + { IVec{ 3, 5, 7 }, -0.006F }, + { IVec{ 1, 6, 7 }, -2.76F }, + { IVec{ 3, 1, 2 }, 0.6F }, + { IVec{ 6, 2, 4 }, 7.1F }, + { IVec{ 4, 5, 6 }, 4.1F }, + { IVec{ 4, 4, 6 }, -3.7F }, + } }, + { "second", + SparseRealGridValuesInput{ + { IVec{ 0, 4, 0 }, 6.F }, + { IVec{ 4, 2, 7 }, 13.76F }, + { IVec{ 0, 6, 7 }, 3.6F }, + { IVec{ 3, 2, 8 }, 0.61F }, + { IVec{ 5, 4, 3 }, 2.1F }, + { IVec{ 2, 5, 10 }, 3.6F }, + { IVec{ 5, 3, 6 }, 2.1F }, + { IVec{ 6, 6, 6 }, 6.1F }, + } } +}; //! Input forces for reduction std::vector const c_sampleForcesFull{ @@ -177,24 +185,8 @@ std::vector const c_sampleForcesFull{ RVec{ 0.47F, 0.04F, 0.47F }, RVec{ 0.34F, 0.71F, 0.52F } }; -//! PME orders to test -std::vector const pmeOrders{ 3, 4, 5 }; -//! Atom counts to test -std::vector const atomCounts{ 1, 2, 13 }; - -/* Helper structures for test input */ - -//! A structure for all the spline data which depends in size both on the PME order and atom count -struct AtomAndPmeOrderSizedData -{ - //! Spline values - SplineParamsVector splineValues; - //! Spline derivatives - SplineParamsVector splineDerivatives; -}; - -//! A structure for all the input atom data which depends in size on atom count - including a range of spline data for different PME orders -struct AtomSizedData +/*! \brief A structure for the input atom data, which depends in size on atom count */ +struct TestSystem { //! Gridline indices GridLineIndicesVector gridLineIndices; @@ -202,60 +194,86 @@ struct AtomSizedData ChargesVector charges; //! Coordinates CoordinatesVector coordinates; - //! Spline data for different orders - std::map splineDataByPmeOrder; }; -//! A range of the test input data sets, uniquely identified by the atom count -typedef std::map InputDataByAtomCount; +/*! \brief Test systems to use + * + * The coordinates are intentionally bogus in this test - only the + * size matters; the gridline indices are fed directly as inputs */ +// TODO use NaN? +std::map c_testSystems = { + { "1 atom", + { GridLineIndicesVector{ { IVec(4, 2, 6) } }, + ChargesVector{ 4.95F }, + CoordinatesVector(1, { 1e6, 1e7, -1e8 }) } }, + { "2 atoms", + { GridLineIndicesVector{ { IVec(1, 4, 10), IVec(0, 6, 6) } }, + ChargesVector{ { 3.11F, 3.97F } }, + CoordinatesVector(2, { 1e6, 1e7, -1e8 }) } }, + { "13 atoms", + { GridLineIndicesVector{ { + IVec{ 0, 1, 4 }, + IVec{ 6, 3, 0 }, + IVec{ 7, 2, 2 }, + IVec{ 8, 3, 1 }, + IVec{ 4, 0, 3 }, + IVec{ 0, 0, 0 }, + IVec{ 8, 5, 8 }, + IVec{ 4, 4, 2 }, + IVec{ 7, 1, 7 }, + IVec{ 8, 5, 5 }, + IVec{ 2, 6, 5 }, + IVec{ 1, 6, 2 }, + IVec{ 7, 1, 8 }, + } }, + ChargesVector{ { 1.08F, 2.09F, 1.1F, 4.13F, 3.31F, 2.8F, 5.83F, 5.09F, 6.1F, 2.86F, 0.24F, 5.76F, 5.19F } }, + CoordinatesVector(13, { 1e6, 1e7, -1e8 }) } }, +}; /*! \brief Convenience typedef of the test input parameters - unit cell box, PME interpolation * order, grid dimensions, grid values, overwriting/reducing the input forces, atom count. - * - * The rest of the atom-related input data - gridline indices, spline theta values, spline dtheta - * values, atom charges - is looked up in the inputAtomDataSets_ test fixture variable. */ -typedef std::tuple GatherInputParameters; +typedef std::tuple GatherInputParameters; -//! Test fixture -class PmeGatherTest : public ::testing::TestWithParam +//! Help GoogleTest name our test cases +std::string nameOfTest(const testing::TestParamInfo& info) { -private: - //! Storage of all the input atom datasets - static InputDataByAtomCount s_inputAtomDataSets_; + std::string testName = formatString( + "box_%s_" + "order_%d_" + "grid_%d_%d_%d_" + "gridvalues_%s_" + "system_%s", + std::get<0>(info.param).c_str(), + std::get<1>(info.param), + std::get<2>(info.param)[XX], + std::get<2>(info.param)[YY], + std::get<2>(info.param)[ZZ], + std::get<3>(info.param).c_str(), + std::get<4>(info.param).c_str()); + + // Note that the returned names must be unique and may use only + // alphanumeric ASCII characters. It's not supposed to contain + // underscores (see the GoogleTest FAQ + // why-should-test-suite-names-and-test-names-not-contain-underscore), + // but doing so works for now, is likely to remain so, and makes + // such test names much more readable. + testName = replaceAll(testName, "-", "_"); + testName = replaceAll(testName, ".", "_"); + testName = replaceAll(testName, " ", "_"); + return testName; +} +//! Test fixture +class GatherTest : public ::testing::TestWithParam +{ public: - PmeGatherTest() = default; + GatherTest() = default; //! Sets the input atom data references and programs once static void SetUpTestSuite() { - size_t start = 0; - for (auto atomCount : atomCounts) - { - AtomSizedData atomData; - atomData.gridLineIndices = - GridLineIndicesVector(c_sampleGridLineIndicesFull).subArray(start, atomCount); - atomData.charges = ChargesVector(c_sampleChargesFull).subArray(start, atomCount); - start += atomCount; - atomData.coordinates.resize(atomCount, RVec{ 1e6, 1e7, -1e8 }); - /* The coordinates are intentionally bogus in this test - only the size matters; the gridline indices are fed directly as inputs */ - for (auto pmeOrder : pmeOrders) - { - AtomAndPmeOrderSizedData splineData; - const size_t dimSize = atomCount * pmeOrder; - for (int dimIndex = 0; dimIndex < DIM; dimIndex++) - { - splineData.splineValues[dimIndex] = - SplineParamsDimVector(c_sampleSplineValuesFull).subArray(dimIndex * dimSize, dimSize); - splineData.splineDerivatives[dimIndex] = - SplineParamsDimVector(c_sampleSplineDerivativesFull).subArray(dimIndex * dimSize, dimSize); - } - atomData.splineDataByPmeOrder[pmeOrder] = splineData; - } - s_inputAtomDataSets_[atomCount] = atomData; - } s_pmeTestHardwareContexts = createPmeTestHardwareContextList(); - g_allowPmeWithSyclForTesting = true; // We support PmeGather with SYCL + g_allowPmeWithSyclForTesting = true; // We support Gather with SYCL } static void TearDownTestSuite() @@ -268,14 +286,15 @@ public: static void runTest() { /* Getting the input */ - Matrix3x3 box; - int pmeOrder; - IVec gridSize; - size_t atomCount; - SparseRealGridValuesInput nonZeroGridValues; - std::tie(box, pmeOrder, gridSize, nonZeroGridValues, atomCount) = GetParam(); - auto inputAtomData = s_inputAtomDataSets_[atomCount]; - auto inputAtomSplineData = inputAtomData.splineDataByPmeOrder[pmeOrder]; + int pmeOrder; + IVec gridSize; + std::string boxName, gridValuesName, testSystemName; + std::tie(boxName, pmeOrder, gridSize, gridValuesName, testSystemName) = GetParam(); + Matrix3x3 box = c_inputBoxes.at(boxName); + const SparseRealGridValuesInput& nonZeroGridValues = c_inputGrids.at(gridValuesName); + TestSystem testSystem = c_testSystems.at(testSystemName); + int atomCount = testSystem.coordinates.size(); + SplineData splineData = getSplineData(pmeOrder, atomCount); /* Storing the input where it's needed, running the test */ t_inputrec inputRec; @@ -304,7 +323,7 @@ public: /* Describing the test uniquely */ SCOPED_TRACE( formatString("Testing force gathering on %s for PME grid size %d %d %d" - ", order %d, %zu atoms", + ", order %d, %d atoms", pmeTestHardwareContext->description().c_str(), gridSize[XX], gridSize[YY], @@ -325,32 +344,28 @@ public: pmeTestHardwareContext->deviceStream()) : nullptr; - pmeInitAtoms(pmeSafe.get(), - stateGpu.get(), - codePath, - inputAtomData.coordinates, - inputAtomData.charges); + pmeInitAtoms(pmeSafe.get(), stateGpu.get(), codePath, testSystem.coordinates, testSystem.charges); /* Setting some more inputs */ pmeSetRealGrid(pmeSafe.get(), codePath, nonZeroGridValues); - pmeSetGridLineIndices(pmeSafe.get(), codePath, inputAtomData.gridLineIndices); + pmeSetGridLineIndices(pmeSafe.get(), codePath, testSystem.gridLineIndices); for (int dimIndex = 0; dimIndex < DIM; dimIndex++) { pmeSetSplineData(pmeSafe.get(), codePath, - inputAtomSplineData.splineValues[dimIndex], + splineData.splineValues[dimIndex], PmeSplineDataType::Values, dimIndex); pmeSetSplineData(pmeSafe.get(), codePath, - inputAtomSplineData.splineDerivatives[dimIndex], + splineData.splineDerivatives[dimIndex], PmeSplineDataType::Derivatives, dimIndex); } /* Explicitly copying the sample forces to be able to modify them */ auto inputForcesFull(c_sampleForcesFull); - GMX_RELEASE_ASSERT(inputForcesFull.size() >= atomCount, "Bad input forces size"); + GMX_RELEASE_ASSERT(ssize(inputForcesFull) >= atomCount, "Bad input forces size"); auto forces = ForcesVector(inputForcesFull).subArray(0, atomCount); /* Running the force gathering itself */ @@ -368,25 +383,30 @@ public: static std::vector> s_pmeTestHardwareContexts; }; -std::vector> PmeGatherTest::s_pmeTestHardwareContexts; - -// An instance of static atom data -InputDataByAtomCount PmeGatherTest::s_inputAtomDataSets_; +std::vector> GatherTest::s_pmeTestHardwareContexts; //! Test for PME force gathering -TEST_P(PmeGatherTest, ReproducesOutputs) +TEST_P(GatherTest, WorksWith) { EXPECT_NO_THROW_GMX(runTest()); } +//! Moved out from instantiations for readability +const auto c_inputBoxNames = ::testing::Values("rect", "tric"); +//! Moved out from instantiations for readability +const auto c_inputGridNames = ::testing::Values("first", "second"); +//! Moved out from instantiations for readability +const auto c_inputTestSystemNames = ::testing::Values("1 atom", "2 atoms", "13 atoms"); + //! Instantiation of the PME gathering test -INSTANTIATE_TEST_SUITE_P(SaneInput, - PmeGatherTest, - ::testing::Combine(::testing::ValuesIn(c_sampleBoxes), - ::testing::ValuesIn(pmeOrders), - ::testing::ValuesIn(c_sampleGridSizes), - ::testing::ValuesIn(c_sampleGrids), - ::testing::ValuesIn(atomCounts))); +INSTANTIATE_TEST_SUITE_P(Pme, + GatherTest, + ::testing::Combine(c_inputBoxNames, + ::testing::ValuesIn(c_inputPmeOrders), + ::testing::ValuesIn(c_inputGridSizes), + c_inputGridNames, + c_inputTestSystemNames), + nameOfTest); } // namespace } // namespace test diff --git a/src/gromacs/ewald/tests/pmesolvetest.cpp b/src/gromacs/ewald/tests/pmesolvetest.cpp index c8ea1bff12..f34897e90e 100644 --- a/src/gromacs/ewald/tests/pmesolvetest.cpp +++ b/src/gromacs/ewald/tests/pmesolvetest.cpp @@ -37,6 +37,7 @@ * Implements PME solving tests. * * \author Aleksei Iupinov + * \author Mark Abraham * \ingroup module_ewald */ @@ -61,25 +62,89 @@ namespace test { namespace { + +//! A couple of valid inputs for grid sizes +std::vector const c_inputGridSizes{ IVec{ 16, 12, 28 }, IVec{ 9, 7, 23 } }; + +//! Two input complex grids - only non-zero values have to be listed +const std::map c_inputGridValues = { + { "first", + SparseComplexGridValuesInput{ + { IVec{ 0, 0, 0 }, t_complex{ 3.5F, 6.7F } }, + { IVec{ 7, 0, 0 }, t_complex{ -2.5F, -0.7F } }, + { IVec{ 3, 5, 7 }, t_complex{ -0.006F, 1e-8F } }, + { IVec{ 3, 1, 2 }, t_complex{ 0.6F, 7.9F } }, + { IVec{ 6, 2, 4 }, t_complex{ 30.1F, 2.45F } }, + } }, + { "second", + SparseComplexGridValuesInput{ + { IVec{ 0, 4, 0 }, t_complex{ 0.0F, 0.3F } }, + { IVec{ 4, 2, 7 }, t_complex{ 13.76F, -40.0F } }, + { IVec{ 0, 6, 7 }, t_complex{ 3.6F, 0.0F } }, + { IVec{ 2, 5, 10 }, t_complex{ 3.6F, 10.65F } }, + } }, +}; + /*! \brief Convenience typedef of the test input parameters - unit cell box, complex grid dimensions, complex grid values, * electrostatic constant epsilon_r, Ewald splitting parameters ewaldcoeff_q and ewaldcoeff_lj, solver type * Output: transformed local grid (Fourier space); optionally reciprocal energy and virial matrix. * TODO: * Implement and test Lorentz-Berthelot */ -typedef std::tuple SolveInputParameters; +typedef std::tuple SolveInputParameters; + +const char* enumValueToString(PmeSolveAlgorithm enumValue) +{ + static constexpr gmx::EnumerationArray s_pmeSolveAlgorithmNames = { + "Coulomb", "LJ" + }; + return s_pmeSolveAlgorithmNames[enumValue]; +} + +//! Help GoogleTest name our test cases +std::string nameOfTest(const testing::TestParamInfo& info) +{ + std::string testName = formatString( + "box_%s_" + "grid_%d_%d_%d_" + "gridvalues_%s_" + "eps_%g_" + "ewaldq_%g_" + "ewaldlj_%g_" + "method_%s", + std::get<0>(info.param).c_str(), + std::get<1>(info.param)[XX], + std::get<1>(info.param)[YY], + std::get<1>(info.param)[ZZ], + std::get<2>(info.param).c_str(), + std::get<3>(info.param), + std::get<4>(info.param), + std::get<5>(info.param), + enumValueToString(std::get<6>(info.param))); + + // Note that the returned names must be unique and may use only + // alphanumeric ASCII characters. It's not supposed to contain + // underscores (see the GoogleTest FAQ + // why-should-test-suite-names-and-test-names-not-contain-underscore), + // but doing so works for now, is likely to remain so, and makes + // such test names much more readable. + testName = replaceAll(testName, "-", "_"); + testName = replaceAll(testName, ".", "_"); + testName = replaceAll(testName, " ", "_"); + return testName; +} //! Test fixture -class PmeSolveTest : public ::testing::TestWithParam +class SolveTest : public ::testing::TestWithParam { public: - PmeSolveTest() = default; + SolveTest() = default; //! Sets the programs once static void SetUpTestSuite() { s_pmeTestHardwareContexts = createPmeTestHardwareContextList(); - g_allowPmeWithSyclForTesting = true; // We support PmeSolve with SYCL + g_allowPmeWithSyclForTesting = true; // We support Solve with SYCL } static void TearDownTestSuite() @@ -92,15 +157,16 @@ public: static void runTest() { /* Getting the input */ - Matrix3x3 box; - IVec gridSize; - SparseComplexGridValuesInput nonZeroGridValues; - double epsilon_r; - double ewaldCoeff_q; - double ewaldCoeff_lj; - PmeSolveAlgorithm method; - std::tie(box, gridSize, nonZeroGridValues, epsilon_r, ewaldCoeff_q, ewaldCoeff_lj, method) = + IVec gridSize; + double epsilon_r; + double ewaldCoeff_q; + double ewaldCoeff_lj; + PmeSolveAlgorithm method; + std::string boxName, gridValuesName; + std::tie(boxName, gridSize, gridValuesName, epsilon_r, ewaldCoeff_q, ewaldCoeff_lj, method) = GetParam(); + Matrix3x3 box = c_inputBoxes.at(boxName); + const SparseComplexGridValuesInput& nonZeroGridValues = c_inputGridValues.at(gridValuesName); /* Storing the input where it's needed, running the test */ t_inputrec inputRec; @@ -274,51 +340,18 @@ public: static std::vector> s_pmeTestHardwareContexts; }; -std::vector> PmeSolveTest::s_pmeTestHardwareContexts; +std::vector> SolveTest::s_pmeTestHardwareContexts; /*! \brief Test for PME solving */ -TEST_P(PmeSolveTest, ReproducesOutputs) +TEST_P(SolveTest, WorksWith) { EXPECT_NO_THROW_GMX(runTest()); } -/* Valid input instances */ - -//! A couple of valid inputs for boxes. -std::vector const c_sampleBoxes{ - // normal box - Matrix3x3{ { 8.0F, 0.0F, 0.0F, 0.0F, 3.4F, 0.0F, 0.0F, 0.0F, 2.0F } }, - // triclinic box - Matrix3x3{ { 7.0F, 0.0F, 0.0F, 0.0F, 4.1F, 0.0F, 3.5F, 2.0F, 12.2F } }, -}; - -//! A couple of valid inputs for grid sizes -std::vector const c_sampleGridSizes{ IVec{ 16, 12, 28 }, IVec{ 9, 7, 23 } }; - //! Moved out from instantiations for readability -const auto c_inputBoxes = ::testing::ValuesIn(c_sampleBoxes); -//! Moved out from instantiations for readability -const auto c_inputGridSizes = ::testing::ValuesIn(c_sampleGridSizes); - -//! 2 sample complex grids - only non-zero values have to be listed -std::vector const c_sampleGrids{ - SparseComplexGridValuesInput{ - { IVec{ 0, 0, 0 }, t_complex{ 3.5F, 6.7F } }, - { IVec{ 7, 0, 0 }, t_complex{ -2.5F, -0.7F } }, - { IVec{ 3, 5, 7 }, t_complex{ -0.006F, 1e-8F } }, - { IVec{ 3, 1, 2 }, t_complex{ 0.6F, 7.9F } }, - { IVec{ 6, 2, 4 }, t_complex{ 30.1F, 2.45F } }, - }, - SparseComplexGridValuesInput{ - { IVec{ 0, 4, 0 }, t_complex{ 0.0F, 0.3F } }, - { IVec{ 4, 2, 7 }, t_complex{ 13.76F, -40.0F } }, - { IVec{ 0, 6, 7 }, t_complex{ 3.6F, 0.0F } }, - { IVec{ 2, 5, 10 }, t_complex{ 3.6F, 10.65F } }, - } -}; - +const auto c_inputBoxNames = ::testing::Values("rect", "tric"); //! Moved out from instantiations for readability -const auto c_inputGrids = ::testing::ValuesIn(c_sampleGrids); +const auto c_inputGridNames = ::testing::Values("first", "second"); //! Moved out from instantiations for readability const auto c_inputEpsilon_r = ::testing::Values(1.2); //! Moved out from instantiations for readability @@ -329,50 +362,54 @@ const auto c_inputEwaldCoeff_lj = ::testing::Values(0.7); const auto c_inputMethods = ::testing::Values(PmeSolveAlgorithm::Coulomb, PmeSolveAlgorithm::LennardJones); //! Instantiation of the PME solving test -INSTANTIATE_TEST_SUITE_P(SaneInput, - PmeSolveTest, - ::testing::Combine(c_inputBoxes, - c_inputGridSizes, - c_inputGrids, +INSTANTIATE_TEST_SUITE_P(Pme, + SolveTest, + ::testing::Combine(c_inputBoxNames, + ::testing::ValuesIn(c_inputGridSizes), + c_inputGridNames, c_inputEpsilon_r, c_inputEwaldCoeff_q, c_inputEwaldCoeff_lj, - c_inputMethods)); + c_inputMethods), + nameOfTest); //! A few more instances to check that different ewaldCoeff_q actually affects results of the Coulomb solver -INSTANTIATE_TEST_SUITE_P(DifferentEwaldCoeffQ, - PmeSolveTest, - ::testing::Combine(c_inputBoxes, - c_inputGridSizes, - c_inputGrids, +INSTANTIATE_TEST_SUITE_P(PmeDiffEwaldQ, + SolveTest, + ::testing::Combine(c_inputBoxNames, + ::testing::ValuesIn(c_inputGridSizes), + c_inputGridNames, c_inputEpsilon_r, ::testing::Values(0.4), c_inputEwaldCoeff_lj, - ::testing::Values(PmeSolveAlgorithm::Coulomb))); + ::testing::Values(PmeSolveAlgorithm::Coulomb)), + nameOfTest); //! A few more instances to check that different ewaldCoeff_lj actually affects results of the Lennard-Jones solver. //! The value has to be approximately larger than 1 / (box dimensions) to have a meaningful output grid. //! Previous value of 0.3 caused one of the grid cells to be less or greater than GMX_FLOAT_MIN, depending on the architecture. -INSTANTIATE_TEST_SUITE_P(DifferentEwaldCoeffLJ, - PmeSolveTest, - ::testing::Combine(c_inputBoxes, - c_inputGridSizes, - c_inputGrids, +INSTANTIATE_TEST_SUITE_P(PmeDiffEwaldLJ, + SolveTest, + ::testing::Combine(c_inputBoxNames, + ::testing::ValuesIn(c_inputGridSizes), + c_inputGridNames, c_inputEpsilon_r, c_inputEwaldCoeff_q, ::testing::Values(2.35), - ::testing::Values(PmeSolveAlgorithm::LennardJones))); + ::testing::Values(PmeSolveAlgorithm::LennardJones)), + nameOfTest); //! A few more instances to check that different epsilon_r actually affects results of all solvers -INSTANTIATE_TEST_SUITE_P(DifferentEpsilonR, - PmeSolveTest, - ::testing::Combine(c_inputBoxes, - c_inputGridSizes, - c_inputGrids, +INSTANTIATE_TEST_SUITE_P(PmeDiffEps, + SolveTest, + ::testing::Combine(c_inputBoxNames, + ::testing::ValuesIn(c_inputGridSizes), + c_inputGridNames, testing::Values(1.9), c_inputEwaldCoeff_q, c_inputEwaldCoeff_lj, - c_inputMethods)); + c_inputMethods), + nameOfTest); } // namespace } // namespace test diff --git a/src/gromacs/ewald/tests/pmesplinespreadtest.cpp b/src/gromacs/ewald/tests/pmesplinespreadtest.cpp index d56cc256b8..db97f313bd 100644 --- a/src/gromacs/ewald/tests/pmesplinespreadtest.cpp +++ b/src/gromacs/ewald/tests/pmesplinespreadtest.cpp @@ -37,6 +37,7 @@ * Implements PME spline computation and charge spreading tests. * * \author Aleksei Iupinov + * \author Mark Abraham * \ingroup module_ewald */ @@ -62,29 +63,113 @@ namespace test namespace { +//! A couple of valid inputs for grid sizes +std::vector const c_inputGridSizes{ IVec{ 16, 12, 14 }, IVec{ 19, 17, 11 } }; + //! PME spline and spread code path being tested -enum class PmeSplineAndSpreadOptions +enum class SplineAndSpreadOptions { SplineOnly, SpreadOnly, - SplineAndSpreadUnified + SplineAndSpreadUnified, + Count }; +struct TestSystem +{ + CoordinatesVector coordinates; + ChargesVector charges; +}; + +const std::unordered_map c_testSystems = { + { "1 atom", { CoordinatesVector{ { 5.59F, 1.37F, 0.95F } }, ChargesVector{ 4.95F } } }, + { "2 atoms", + { CoordinatesVector{ + // 2 box lengths in x + { 16.0F, 1.02F, 0.22F }, + { 0.034F, 1.65F, 0.22F }, + }, + ChargesVector{ { + 3.11F, + 3.97F, + } } } }, + { "13 atoms", + { CoordinatesVector{ + { 0.33F, 0.92F, 1.56F }, + { 1.16F, 0.75F, 0.39F }, + { 0.5F, 1.63F, 1.14F }, + // > 2 box lengths in x + { 16.0001F, 1.52F, 1.19F }, + // > 2 box lengths in z + { 1.43F, 1.1F, 4.1F }, + // negative x + { -1.08F, 1.19F, 0.08F }, + { 1.6F, 0.93F, 0.53F }, + // negative y + { 1.32F, -1.48F, 0.16F }, + { 0.87F, 0.0F, 0.33F }, + // > 2 box lengths in y, negative z + { 0.95F, 7.7F, -0.48F }, + { 1.23F, 0.91F, 0.68F }, + { 0.19F, 1.45F, 0.94F }, + { 1.28F, 0.46F, 0.38F }, + }, + ChargesVector{ 1.08F, 2.09F, 1.1F, 4.13F, 3.31F, 2.8F, 5.83F, 5.09F, 6.1F, 2.86F, 0.24F, 5.76F, 5.19F } } }, +}; + +/* Valid input instances */ + /*! \brief Convenience typedef of input parameters - unit cell box, PME interpolation order, grid * dimensions, particle coordinates, particle charges * TODO: consider inclusion of local grid offsets/sizes or PME nodes counts to test the PME DD */ -typedef std::tuple SplineAndSpreadInputParameters; +typedef std::tuple SplineAndSpreadInputParameters; + +//! Help GoogleTest name our test cases +std::string nameOfTest(const testing::TestParamInfo& info) +{ + std::string testName = formatString( + "box_%s_" + "order_%d_" + "grid_%d_%d_%d_" + "system_%s", + std::get<0>(info.param).c_str(), + std::get<1>(info.param), + std::get<2>(info.param)[XX], + std::get<2>(info.param)[YY], + std::get<2>(info.param)[ZZ], + std::get<3>(info.param).c_str()); + + // Note that the returned names must be unique and may use only + // alphanumeric ASCII characters. It's not supposed to contain + // underscores (see the GoogleTest FAQ + // why-should-test-suite-names-and-test-names-not-contain-underscore), + // but doing so works for now, is likely to remain so, and makes + // such test names much more readable. + testName = replaceAll(testName, "-", "_"); + testName = replaceAll(testName, ".", "_"); + testName = replaceAll(testName, " ", "_"); + return testName; +} + +const char* enumValueToString(SplineAndSpreadOptions enumValue) +{ + static constexpr gmx::EnumerationArray s_splineAndSpreadOptionsNames = { + "spline computation", + "charge spreading", + "spline computation and charge spreading (fused)", + }; + return s_splineAndSpreadOptionsNames[enumValue]; +} /*! \brief Test fixture for testing both atom spline parameter computation and charge spreading. * These 2 stages of PME are tightly coupled in the code. */ -class PmeSplineAndSpreadTest : public ::testing::TestWithParam +class SplineAndSpreadTest : public ::testing::TestWithParam { public: - PmeSplineAndSpreadTest() = default; + SplineAndSpreadTest() = default; - //! Sets the programs once static void SetUpTestSuite() { s_pmeTestHardwareContexts = createPmeTestHardwareContextList(); @@ -101,14 +186,15 @@ public: static void runTest() { /* Getting the input */ - Matrix3x3 box; - int pmeOrder; - IVec gridSize; - CoordinatesVector coordinates; - ChargesVector charges; + int pmeOrder; + IVec gridSize; + std::string boxName, testSystemName; - std::tie(box, pmeOrder, gridSize, coordinates, charges) = GetParam(); - const size_t atomCount = coordinates.size(); + std::tie(boxName, pmeOrder, gridSize, testSystemName) = GetParam(); + Matrix3x3 box = c_inputBoxes.at(boxName); + const CoordinatesVector& coordinates = c_testSystems.at(testSystemName).coordinates; + const ChargesVector& charges = c_testSystems.at(testSystemName).charges; + const size_t atomCount = coordinates.size(); /* Storing the input where it's needed */ t_inputrec inputRec; @@ -119,13 +205,6 @@ public: inputRec.coulombtype = CoulombInteractionType::Pme; inputRec.epsilon_r = 1.0; - const std::map optionsToTest = { - { PmeSplineAndSpreadOptions::SplineAndSpreadUnified, - "spline computation and charge spreading (fused)" }, - { PmeSplineAndSpreadOptions::SplineOnly, "spline computation" }, - { PmeSplineAndSpreadOptions::SpreadOnly, "charge spreading" } - }; - // There is a subtle problem with multiple comparisons against same reference data: // The subsequent (GPU) spreading runs at one point didn't actually copy the output grid // into the proper buffer, but the reference data was already marked as checked @@ -151,14 +230,14 @@ public: continue; } - for (const auto& option : optionsToTest) + for (SplineAndSpreadOptions option : EnumerationWrapper()) { /* Describing the test uniquely in case it fails */ SCOPED_TRACE( formatString("Testing %s on %s for PME grid size %d %d %d" ", order %d, %zu atoms", - option.second.c_str(), + enumValueToString(option), pmeTestHardwareContext->description().c_str(), gridSize[XX], gridSize[YY], @@ -183,12 +262,10 @@ public: pmeInitAtoms(pmeSafe.get(), stateGpu.get(), codePath, coordinates, charges); - const bool computeSplines = - (option.first == PmeSplineAndSpreadOptions::SplineOnly) - || (option.first == PmeSplineAndSpreadOptions::SplineAndSpreadUnified); - const bool spreadCharges = - (option.first == PmeSplineAndSpreadOptions::SpreadOnly) - || (option.first == PmeSplineAndSpreadOptions::SplineAndSpreadUnified); + const bool computeSplines = (option == SplineAndSpreadOptions::SplineOnly) + || (option == SplineAndSpreadOptions::SplineAndSpreadUnified); + const bool spreadCharges = (option == SplineAndSpreadOptions::SpreadOnly) + || (option == SplineAndSpreadOptions::SplineAndSpreadUnified); if (!computeSplines) { @@ -289,123 +366,30 @@ public: static std::vector> s_pmeTestHardwareContexts; }; -std::vector> PmeSplineAndSpreadTest::s_pmeTestHardwareContexts; +std::vector> SplineAndSpreadTest::s_pmeTestHardwareContexts; /*! \brief Test for spline parameter computation and charge spreading. */ -TEST_P(PmeSplineAndSpreadTest, ReproducesOutputs) +TEST_P(SplineAndSpreadTest, WorksWith) { EXPECT_NO_THROW_GMX(runTest()); } -/* Valid input instances */ - -//! A couple of valid inputs for boxes. -std::vector const c_sampleBoxes{ - // normal box - Matrix3x3{ { 8.0F, 0.0F, 0.0F, 0.0F, 3.4F, 0.0F, 0.0F, 0.0F, 2.0F } }, - // triclinic box - Matrix3x3{ { 7.0F, 0.0F, 0.0F, 0.0F, 4.1F, 0.0F, 3.5F, 2.0F, 12.2F } }, -}; +//! Moved out from instantiations for readability +const auto c_inputBoxNames = ::testing::Values("rect", "tric"); +//! Moved out from instantiations for readability +const auto c_inputGridNames = ::testing::Values("first", "second"); +//! Moved out from instantiations for readability +const auto c_inputTestSystemNames = ::testing::Values("1 atom", "2 atoms", "13 atoms"); + +INSTANTIATE_TEST_SUITE_P(Pme, + SplineAndSpreadTest, + ::testing::Combine(c_inputBoxNames, + ::testing::ValuesIn(c_inputPmeOrders), + ::testing::ValuesIn(c_inputGridSizes), + c_inputTestSystemNames), + nameOfTest); -//! A couple of valid inputs for grid sizes. -std::vector const c_sampleGridSizes{ IVec{ 16, 12, 14 }, IVec{ 19, 17, 11 } }; - -//! Random charges -std::vector const c_sampleChargesFull{ 4.95F, 3.11F, 3.97F, 1.08F, 2.09F, 1.1F, - 4.13F, 3.31F, 2.8F, 5.83F, 5.09F, 6.1F, - 2.86F, 0.24F, 5.76F, 5.19F, 0.72F }; -//! 1 charge -auto const c_sampleCharges1 = ChargesVector(c_sampleChargesFull).subArray(0, 1); -//! 2 charges -auto const c_sampleCharges2 = ChargesVector(c_sampleChargesFull).subArray(1, 2); -//! 13 charges -auto const c_sampleCharges13 = ChargesVector(c_sampleChargesFull).subArray(3, 13); - -//! Random coordinate vectors -CoordinatesVector const c_sampleCoordinatesFull{ { 5.59F, 1.37F, 0.95F }, - { - 16.0F, - 1.02F, - 0.22F // 2 box lengths in x - }, - { 0.034F, 1.65F, 0.22F }, - { 0.33F, 0.92F, 1.56F }, - { 1.16F, 0.75F, 0.39F }, - { 0.5F, 1.63F, 1.14F }, - { - 16.0001F, - 1.52F, - 1.19F // > 2 box lengths in x - }, - { - 1.43F, - 1.1F, - 4.1F // > 2 box lengths in z - }, - { - -1.08F, - 1.19F, - 0.08F // negative x - }, - { 1.6F, 0.93F, 0.53F }, - { - 1.32F, - -1.48F, - 0.16F // negative y - }, - { 0.87F, 0.0F, 0.33F }, - { - 0.95F, - 7.7F, - -0.48F // > 2 box lengths in y, negative z - }, - { 1.23F, 0.91F, 0.68F }, - { 0.19F, 1.45F, 0.94F }, - { 1.28F, 0.46F, 0.38F }, - { 1.21F, 0.23F, 1.0F } }; -//! 1 coordinate vector -CoordinatesVector const c_sampleCoordinates1(c_sampleCoordinatesFull.begin(), - c_sampleCoordinatesFull.begin() + 1); -//! 2 coordinate vectors -CoordinatesVector const c_sampleCoordinates2(c_sampleCoordinatesFull.begin() + 1, - c_sampleCoordinatesFull.begin() + 3); -//! 13 coordinate vectors -CoordinatesVector const c_sampleCoordinates13(c_sampleCoordinatesFull.begin() + 3, - c_sampleCoordinatesFull.begin() + 16); - -//! moved out from instantiantions for readability -auto c_inputBoxes = ::testing::ValuesIn(c_sampleBoxes); -//! moved out from instantiantions for readability -auto c_inputPmeOrders = ::testing::Range(3, 5 + 1); -//! moved out from instantiantions for readability -auto c_inputGridSizes = ::testing::ValuesIn(c_sampleGridSizes); - -/*! \brief Instantiation of the test with valid input and 1 atom */ -INSTANTIATE_TEST_SUITE_P(SaneInput1, - PmeSplineAndSpreadTest, - ::testing::Combine(c_inputBoxes, - c_inputPmeOrders, - c_inputGridSizes, - ::testing::Values(c_sampleCoordinates1), - ::testing::Values(c_sampleCharges1))); - -/*! \brief Instantiation of the test with valid input and 2 atoms */ -INSTANTIATE_TEST_SUITE_P(SaneInput2, - PmeSplineAndSpreadTest, - ::testing::Combine(c_inputBoxes, - c_inputPmeOrders, - c_inputGridSizes, - ::testing::Values(c_sampleCoordinates2), - ::testing::Values(c_sampleCharges2))); -/*! \brief Instantiation of the test with valid input and 13 atoms */ -INSTANTIATE_TEST_SUITE_P(SaneInput13, - PmeSplineAndSpreadTest, - ::testing::Combine(c_inputBoxes, - c_inputPmeOrders, - c_inputGridSizes, - ::testing::Values(c_sampleCoordinates13), - ::testing::Values(c_sampleCharges13))); } // namespace } // namespace test } // namespace gmx diff --git a/src/gromacs/ewald/tests/pmetestcommon.cpp b/src/gromacs/ewald/tests/pmetestcommon.cpp index 0016cd8024..8589d21bea 100644 --- a/src/gromacs/ewald/tests/pmetestcommon.cpp +++ b/src/gromacs/ewald/tests/pmetestcommon.cpp @@ -82,6 +82,15 @@ namespace gmx namespace test { +//! A couple of valid inputs for boxes. +const std::map c_inputBoxes = { + { "rect", { { 8.0F, 0.0F, 0.0F, 0.0F, 3.4F, 0.0F, 0.0F, 0.0F, 2.0F } } }, + { "tric", { { 7.0F, 0.0F, 0.0F, 0.0F, 4.1F, 0.0F, 3.5F, 2.0F, 12.2F } } }, +}; + +//! Valid PME orders for testing +std::vector c_inputPmeOrders{ 3, 4, 5 }; + bool pmeSupportsInputForMode(const gmx_hw_info_t& hwinfo, const t_inputrec* inputRec, CodePath mode) { bool implemented; @@ -192,7 +201,7 @@ void pmeInitAtoms(gmx_pme_t* pme, const ChargesVector& charges) { const index atomCount = coordinates.size(); - GMX_RELEASE_ASSERT(atomCount == charges.ssize(), "Mismatch in atom data"); + GMX_RELEASE_ASSERT(atomCount == gmx::ssize(charges), "Mismatch in atom data"); PmeAtomComm* atc = nullptr; switch (mode) @@ -677,7 +686,7 @@ void pmeSetGridLineIndices(gmx_pme_t* pme, CodePath mode, const GridLineIndicesV { PmeAtomComm* atc = &(pme->atc[0]); const index atomCount = atc->numAtoms(); - GMX_RELEASE_ASSERT(atomCount == gridLineIndices.ssize(), "Mismatch in gridline indices size"); + GMX_RELEASE_ASSERT(atomCount == ssize(gridLineIndices), "Mismatch in gridline indices size"); IVec paddedGridSizeUnused, gridSize(0, 0, 0); pmeGetRealGridSizesInternal(pme, mode, gridSize, paddedGridSizeUnused); @@ -810,11 +819,15 @@ GridLineIndicesVector pmeGetGridlineIndices(const gmx_pme_t* pme, CodePath mode) switch (mode) { case CodePath::GPU: - gridLineIndices = arrayRefFromArray( - reinterpret_cast(pme_gpu_staging(pme->gpu).h_gridlineIndices), atomCount); - break; + { + auto* gridlineIndicesAsIVec = + reinterpret_cast(pme_gpu_staging(pme->gpu).h_gridlineIndices); + ArrayRef gridlineIndicesArrayRef = arrayRefFromArray(gridlineIndicesAsIVec, atomCount); + gridLineIndices = { gridlineIndicesArrayRef.begin(), gridlineIndicesArrayRef.end() }; + } + break; - case CodePath::CPU: gridLineIndices = atc->idx; break; + case CodePath::CPU: gridLineIndices = { atc->idx.begin(), atc->idx.end() }; break; default: GMX_THROW(InternalError("Test not implemented for this mode")); } @@ -910,16 +923,6 @@ PmeOutput pmeGetReciprocalEnergyAndVirial(const gmx_pme_t* pme, CodePath mode, P return output; } -const char* codePathToString(CodePath codePath) -{ - switch (codePath) - { - case CodePath::CPU: return "CPU"; - case CodePath::GPU: return "GPU"; - default: GMX_THROW(NotImplementedError("This CodePath should support codePathToString")); - } -} - PmeTestHardwareContext::PmeTestHardwareContext() : codePath_(CodePath::CPU) {} PmeTestHardwareContext::PmeTestHardwareContext(TestDevice* testDevice) : diff --git a/src/gromacs/ewald/tests/pmetestcommon.h b/src/gromacs/ewald/tests/pmetestcommon.h index 6b1e6d136c..1dc2db66b4 100644 --- a/src/gromacs/ewald/tests/pmetestcommon.h +++ b/src/gromacs/ewald/tests/pmetestcommon.h @@ -1,7 +1,7 @@ /* * This file is part of the GROMACS molecular simulation package. * - * Copyright (c) 2016,2017,2018,2019,2020, by the GROMACS development team, led by + * Copyright (c) 2016,2017,2018,2019,2020,2021, by the GROMACS development team, led by * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl, * and including many others, as listed in the AUTHORS file in the * top-level source directory and at http://www.gromacs.org. @@ -74,20 +74,17 @@ enum class CodePath : int Count }; -//! Return a string useful for human-readable messages describing a \c codePath. -const char* codePathToString(CodePath codePath); - // Convenience typedefs //! A safe pointer type for PME. typedef gmx::unique_cptr PmeSafePointer; //! Charges -typedef ArrayRef ChargesVector; +typedef std::vector ChargesVector; //! Coordinates typedef std::vector CoordinatesVector; //! Forces typedef ArrayRef ForcesVector; //! Gridline indices -typedef ArrayRef GridLineIndicesVector; +typedef std::vector GridLineIndicesVector; /*! \brief Spline parameters (theta or dtheta). * A reference to a single dimension's spline data; this means (atomCount * pmeOrder) values or derivatives. */ @@ -246,6 +243,12 @@ struct PmeTestHardwareContext std::vector> createPmeTestHardwareContextList(); +//! A couple of valid inputs for boxes. +extern const std::map c_inputBoxes; + +//! Valid PME orders for testing +extern std::vector c_inputPmeOrders; + } // namespace test } // namespace gmx diff --git a/src/gromacs/ewald/tests/refdata/DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_0.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEps_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_0.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEps_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEpsilonR_PmeSolveTest_ReproducesOutputs_1.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEps_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_9_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from 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a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_3.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldLJ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_3.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldLJ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_4.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_4.xml rename to 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src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_6.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_7.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffLJ_PmeSolveTest_ReproducesOutputs_7.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldLJ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_2_35_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_0.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_0.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_1.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_1.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_2.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_2.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_3.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_3.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_4.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_4.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_5.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_5.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_6.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_6.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_7.xml b/src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/DifferentEwaldCoeffQ_PmeSolveTest_ReproducesOutputs_7.xml rename to src/gromacs/ewald/tests/refdata/PmeDiffEwaldQ_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_0_4_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_8.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_8.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_6.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_6.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_7.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_7.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_11.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_11.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_9.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_9.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_10.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_10.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_13_15_11_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_2.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_2.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_0.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_0.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_1.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_1.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_5.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_5.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_3.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_3.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_4.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_4.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_3_grid_16_12_14_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_20.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_20.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_18.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml similarity index 86% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_18.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml index 771778a510..4c5cf09410 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_18.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml @@ -6,7 +6,7 @@ -8.2305961590882664 1.2798951389932887 - -6.3929958163443716 + -6.3929958163443734 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_19.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_19.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_23.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_23.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_21.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_21.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_22.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_22.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_13_15_11_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_14.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_14.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_12.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml similarity index 86% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_12.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml index 32b9f451ef..9f65a9d983 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_12.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml @@ -5,7 +5,7 @@ 1 -10.129964503493252 - 1.0239161111946309 + 1.0239161111946307 -8.1365401298928379 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_13.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_13.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_17.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_17.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_15.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_15.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_16.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_16.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_4_grid_16_12_14_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_32.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_13_atoms.xml similarity index 97% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_32.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_13_atoms.xml index 79bbf3b0e2..fe0b3dc6c2 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_32.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_13_atoms.xml @@ -6,7 +6,7 @@ -2.7819333917763145 -0.93764334824057782 - -0.2933831518353347 + -0.29338315183533475 0 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_30.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_30.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_31.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_31.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_35.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_35.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_33.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml similarity index 86% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_33.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml index ae13cfb5b2..86c8e77974 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_33.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml @@ -4,7 +4,7 @@ 1 - -11.730963177507448 + -11.73096317750745 -23.472514874739037 -5.870091744290689 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_34.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_34.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_13_15_11_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_26.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_13_atoms.xml similarity index 97% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_26.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_13_atoms.xml index 440ae9f618..3dce4918c1 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_26.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_13_atoms.xml @@ -6,7 +6,7 @@ -3.423918020647772 -0.75011467859246217 - -0.37339673869951689 + -0.37339673869951695 0 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_24.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_24.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_25.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_25.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_29.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_29.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_27.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml similarity index 86% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_27.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml index 0156967534..5e7af781e2 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_27.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml @@ -4,7 +4,7 @@ 1 - -14.438108526163012 + -14.438108526163015 -18.778011899791231 -7.4710258563699679 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_28.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_28.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_rect_order_5_grid_16_12_14_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_44.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_44.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_42.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_42.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_43.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_43.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_47.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_47.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_45.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_45.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_46.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_46.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_13_15_11_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_38.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_38.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_36.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_36.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_37.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_37.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_41.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_41.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_39.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_39.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_40.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_40.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_3_grid_16_12_14_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_56.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_56.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_54.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml similarity index 73% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_54.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml index e8bfc65fd7..b8d7398cf8 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_54.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_1_atom.xml @@ -5,8 +5,8 @@ 1 -9.4063956103865909 - 1.0613765111849378 - 1.4765278904032617 + 1.0613765111849376 + 1.4765278904032615 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_55.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_55.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_59.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_59.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_57.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_57.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_58.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_58.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_13_15_11_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_50.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_50.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_48.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml similarity index 73% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_48.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml index b0c8d11357..50244a9387 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_48.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_1_atom.xml @@ -5,8 +5,8 @@ 1 -11.577102289706572 - 0.84910120894795016 - 1.8482439089193423 + 0.84910120894795005 + 1.8482439089193421 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_49.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_49.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_53.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_53.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_51.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_51.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_52.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_52.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_4_grid_16_12_14_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_68.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_68.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_66.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_66.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_67.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_67.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_71.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_71.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_69.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml similarity index 86% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_69.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml index 354d15b0b3..9871d3af02 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_69.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_1_atom.xml @@ -4,7 +4,7 @@ 1 - -13.406815060008512 + -13.406815060008514 -19.465013333891342 6.0748932006495915 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_70.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_70.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_13_15_11_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_62.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_62.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_60.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_60.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_61.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_61.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_first_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_65.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_65.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_63.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml similarity index 86% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_63.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml index a5acad9c82..bd4621e99b 100644 --- a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_63.xml +++ b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_1_atom.xml @@ -4,7 +4,7 @@ 1 - -16.500695458472013 + -16.500695458472016 -15.572010667113076 6.0618364657657224 diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_64.xml b/src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeGatherTest_ReproducesOutputs_64.xml rename to src/gromacs/ewald/tests/refdata/Pme_GatherTest_WorksWith_box_tric_order_5_grid_16_12_14_gridvalues_second_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_0.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_0.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_1.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_1.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_2.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_2.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_3.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_3.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_4.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_4.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_5.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_5.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_6.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_6.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_7.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_7.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_rect_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_8.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_8.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_9.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_9.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_10.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_10.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_11.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_11.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_16_12_28_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_12.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_12.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_13.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_13.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_first_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_14.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_14.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_Coulomb.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_15.xml b/src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput_PmeSolveTest_ReproducesOutputs_15.xml rename to src/gromacs/ewald/tests/refdata/Pme_SolveTest_WorksWith_box_tric_grid_9_7_23_gridvalues_second_eps_1_2_ewaldq_2_ewaldlj_0_7_method_LJ.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_0.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_16_12_14_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_1.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_3_grid_19_17_11_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_2.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_16_12_14_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_3.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_4_grid_19_17_11_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_4.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_16_12_14_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_5.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_rect_order_5_grid_19_17_11_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_6.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_16_12_14_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_7.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_3_grid_19_17_11_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_8.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_16_12_14_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_9.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_4_grid_19_17_11_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_10.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_16_12_14_system_2_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_13_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput13_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_13_atoms.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_1_atom.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput1_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_1_atom.xml diff --git a/src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml b/src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_2_atoms.xml similarity index 100% rename from src/gromacs/ewald/tests/refdata/SaneInput2_PmeSplineAndSpreadTest_ReproducesOutputs_11.xml rename to src/gromacs/ewald/tests/refdata/Pme_SplineAndSpreadTest_WorksWith_box_tric_order_5_grid_19_17_11_system_2_atoms.xml -- 2.22.0