BioD PNPI Git Repos - alexxy/gromacs.git/commit

biod.pnpi.spb.ru / alexxy / gromacs.git / commit

author	Mark Abraham <mark.j.abraham@gmail.com>
	Tue, 7 Jul 2015 10:03:30 +0000 (12:03 +0200)
committer	Erik Lindahl <erik@kth.se>
	Sun, 26 Jul 2015 17:42:35 +0000 (19:42 +0200)
commit	a04f855267ee04b810f645e184f75fe6b520b8af
tree	568c8faacb6ecc693ae1b9cde5c73c82d4a6c4f0	tree \| snapshot
parent	112241dea82b19d0a265556bd554fd8a84b60ded	commit \| diff

Convert some mdrun utility code to C++

Eliminated unused variables, used std::min/max, renamed "try" variable
to "attempt" to avoid reserved word, moved declaration of MPI-specific
variables, added space between string literals intended for
concatenation, moved some variable declarations inside matching
preprocessor regions.

Change-Id: Id16fea81d90f15de9a8e8e6eadeb364df954fff7

19 files changed:

src/gromacs/gmxlib/calcgrid.cpp	[moved from src/gromacs/gmxlib/calcgrid.c with 94% similarity]	diff \| blob \| history
src/gromacs/gmxlib/chargegroup.cpp	[moved from src/gromacs/gmxlib/chargegroup.c with 99% similarity]	diff \| blob \| history
src/gromacs/gmxlib/disre.cpp	[moved from src/gromacs/gmxlib/disre.c with 97% similarity]	diff \| blob \| history
src/gromacs/gmxlib/ifunc.cpp	[moved from src/gromacs/gmxlib/ifunc.c with 99% similarity]	diff \| blob \| history
src/gromacs/gmxlib/inputrec.cpp	[moved from src/gromacs/gmxlib/inputrec.c with 97% similarity]	diff \| blob \| history
src/gromacs/gmxlib/md_logging.cpp	[moved from src/gromacs/gmxlib/md_logging.c with 97% similarity]	diff \| blob \| history
src/gromacs/gmxlib/names.cpp	[moved from src/gromacs/gmxlib/names.c with 100% similarity]	blob \| history
src/gromacs/gmxlib/network.cpp	[moved from src/gromacs/gmxlib/network.c with 99% similarity]	diff \| blob \| history
src/gromacs/gmxlib/orires.cpp	[moved from src/gromacs/gmxlib/orires.c with 99% similarity]	diff \| blob \| history
src/gromacs/gmxlib/rbin.cpp	[moved from src/gromacs/gmxlib/rbin.c with 100% similarity]	blob \| history
src/gromacs/gmxlib/sighandler.cpp	[moved from src/gromacs/gmxlib/sighandler.c with 100% similarity]	blob \| history
src/gromacs/gmxlib/txtdump.cpp	[moved from src/gromacs/gmxlib/txtdump.c with 98% similarity]	diff \| blob \| history
src/gromacs/gmxlib/typedefs.cpp	[moved from src/gromacs/gmxlib/typedefs.c with 99% similarity]	diff \| blob \| history
src/gromacs/mdlib/compute_io.cpp	[moved from src/gromacs/mdlib/compute_io.c with 98% similarity]	diff \| blob \| history
src/gromacs/mdlib/ebin.cpp	[moved from src/gromacs/mdlib/ebin.c with 99% similarity]	diff \| blob \| history
src/gromacs/mdlib/mdebin.cpp	[moved from src/gromacs/mdlib/mdebin.c with 98% similarity]	diff \| blob \| history
src/gromacs/mdlib/mdebin_bar.cpp	[moved from src/gromacs/mdlib/mdebin_bar.c with 99% similarity]	diff \| blob \| history
src/gromacs/mdlib/perf_est.cpp	[moved from src/gromacs/mdlib/perf_est.c with 94% similarity]	diff \| blob \| history
src/gromacs/mdlib/tgroup.cpp	[moved from src/gromacs/mdlib/tgroup.c with 98% similarity]	diff \| blob \| history

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