BioD PNPI Git Repos - alexxy/gromacs.git/commit

biod.pnpi.spb.ru / alexxy / gromacs.git / commit

author	Erik Lindahl <erik@kth.se>
	Fri, 10 Jul 2015 20:43:55 +0000 (22:43 +0200)
committer	Gerrit Code Review <gerrit@gerrit.gromacs.org>
	Tue, 28 Jul 2015 21:51:09 +0000 (23:51 +0200)
commit	3a5934fccd489925ab5e80aeb4bf703040137071
tree	06a1010defe5b98c4af9c591c04be9965fd9da3b	tree \| snapshot
parent	6ecd5d46bf94b6ef898e8fac4a7770bd7b2ee5d5	commit \| diff

Moved first batch of analysis tool source to C++

Mostly trivial C to C++ changes. Some code paths that
were unused or simply not implemented have been
removed for now.

Change-Id: I1204777dc90db95e0d4a7b92191c299fe0982f0b

46 files changed:

src/gromacs/gmxana/anadih.cpp		diff \| blob \| history
src/gromacs/gmxana/cmat.cpp		diff \| blob \| history
src/gromacs/gmxana/dlist.cpp		diff \| blob \| history
src/gromacs/gmxana/gmx_anadock.cpp	[moved from src/gromacs/gmxana/gmx_anadock.c with 95% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_anaeig.cpp	[moved from src/gromacs/gmxana/gmx_anaeig.c with 91% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_analyze.cpp	[moved from src/gromacs/gmxana/gmx_analyze.c with 94% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_angle.cpp	[moved from src/gromacs/gmxana/gmx_angle.c with 91% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_bar.cpp	[moved from src/gromacs/gmxana/gmx_bar.c with 94% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_bundle.cpp	[moved from src/gromacs/gmxana/gmx_bundle.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_chi.cpp	[moved from src/gromacs/gmxana/gmx_chi.c with 97% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_cluster.cpp	[moved from src/gromacs/gmxana/gmx_cluster.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_clustsize.cpp	[moved from src/gromacs/gmxana/gmx_clustsize.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_confrms.cpp	[moved from src/gromacs/gmxana/gmx_confrms.c with 97% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_covar.cpp	[moved from src/gromacs/gmxana/gmx_covar.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_current.cpp	[moved from src/gromacs/gmxana/gmx_current.c with 94% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_density.cpp	[moved from src/gromacs/gmxana/gmx_density.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_densmap.cpp	[moved from src/gromacs/gmxana/gmx_densmap.c with 93% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_densorder.cpp		diff \| blob \| history
src/gromacs/gmxana/gmx_dielectric.cpp	[moved from src/gromacs/gmxana/gmx_dielectric.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_dipoles.cpp		diff \| blob \| history
src/gromacs/gmxana/gmx_disre.cpp	[moved from src/gromacs/gmxana/gmx_disre.c with 92% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_do_dssp.cpp	[moved from src/gromacs/gmxana/gmx_do_dssp.c with 94% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_dos.cpp	[moved from src/gromacs/gmxana/gmx_dos.c with 92% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_dyecoupl.cpp	[moved from src/gromacs/gmxana/gmx_dyecoupl.c with 97% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_dyndom.cpp	[moved from src/gromacs/gmxana/gmx_dyndom.c with 98% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_editconf.cpp	[moved from src/gromacs/gmxana/gmx_editconf.c with 93% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_eneconv.cpp	[moved from src/gromacs/gmxana/gmx_eneconv.c with 97% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_enemat.cpp	[moved from src/gromacs/gmxana/gmx_enemat.c with 98% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_energy.cpp	[moved from src/gromacs/gmxana/gmx_energy.c with 95% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_filter.cpp	[moved from src/gromacs/gmxana/gmx_filter.c with 99% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_genion.cpp	[moved from src/gromacs/gmxana/gmx_genion.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_genpr.cpp	[moved from src/gromacs/gmxana/gmx_genpr.c with 98% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_gyrate.cpp	[moved from src/gromacs/gmxana/gmx_gyrate.c with 95% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_h2order.cpp	[moved from src/gromacs/gmxana/gmx_h2order.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_hbond.cpp	[moved from src/gromacs/gmxana/gmx_hbond.c with 96% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_helix.cpp	[moved from src/gromacs/gmxana/gmx_helix.c with 98% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_helixorient.cpp	[moved from src/gromacs/gmxana/gmx_helixorient.c with 86% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_hydorder.cpp	[moved from src/gromacs/gmxana/gmx_hydorder.c with 95% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_lie.cpp	[moved from src/gromacs/gmxana/gmx_lie.c with 93% similarity]	diff \| blob \| history
src/gromacs/gmxana/gmx_pme_error.cpp		diff \| blob \| history
src/gromacs/gmxana/gmx_wham.cpp		diff \| blob \| history
src/gromacs/gmxana/nrama.cpp		diff \| blob \| history
src/gromacs/gmxana/nsfactor.cpp		diff \| blob \| history
src/gromacs/gmxana/pp2shift.cpp		diff \| blob \| history
src/gromacs/gmxana/princ.cpp		diff \| blob \| history
src/gromacs/gmxana/sfactor.cpp		diff \| blob \| history

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