Enable update groups
authorBerk Hess <hess@kth.se>
Wed, 19 Sep 2018 10:51:38 +0000 (12:51 +0200)
committerMark Abraham <mark.j.abraham@gmail.com>
Mon, 8 Oct 2018 22:04:47 +0000 (00:04 +0200)
commitd380efb0df97143449c75d18dd73704cdb3fa719
treee3b896f2e70c034e909ebd9ec1ebfa3bdf8a0a8d
parent3812a8e5545d80d1e9687ea93104a886f991200b
Enable update groups

Also changed the naming of the decomposition unit. Everything was
named charge group, now it can also be atom or atom group.

Update groups are now mentioned in the manual and release notes

Change-Id: Ide81a759aa623be22672583dd5a8bac332c4c904
docs/reference-manual/algorithms/parallelization-domain-decomp.rst
docs/release-notes/performance.rst
src/gromacs/domdec/domdec.cpp
src/gromacs/domdec/domdec_topology.cpp
src/gromacs/domdec/partition.cpp
src/gromacs/domdec/redistribute.cpp
src/gromacs/mdlib/lincs.cpp