BioD PNPI Git Repos - alexxy/gromacs.git/commit - src/gromacs/gmxpreprocess/convparm.cpp

biod.pnpi.spb.ru / alexxy / gromacs.git / commit

author	Berk Hess <hess@kth.se>
	Wed, 12 Sep 2018 23:29:27 +0000 (01:29 +0200)
committer	Mark Abraham <mark.j.abraham@gmail.com>
	Thu, 13 Sep 2018 13:49:55 +0000 (15:49 +0200)
commit	f51890ea2850ab56e5b6c8f73959b6b756ad6b29
tree	326893ead5c2dd370c22be8dfc28de1f14ff6990	tree \| snapshot
parent	a0ed89285e1e872f9d9cfe47a0c18b6650d0fbf2	commit \| diff

Add C++ version of t_ilist

gmx_moltype_t in gmx_mtop_t now uses a C++ version of t_ilist called
InteractionList. The interface of IteractionList and t_ilist match
such that templated code can work with either. Thus we do not need
to change all code that uses t_idef now as well.

Change-Id: I90b829dae874f38d52ec0ceb538342313b2f8dd9

37 files changed:

src/gromacs/domdec/domdec.cpp		diff \| blob \| history
src/gromacs/domdec/domdec_constraints.cpp		diff \| blob \| history
src/gromacs/domdec/domdec_topology.cpp		diff \| blob \| history
src/gromacs/fileio/tngio.cpp		diff \| blob \| history
src/gromacs/fileio/tpxio.cpp		diff \| blob \| history
src/gromacs/gmxana/gmx_nmeig.cpp		diff \| blob \| history
src/gromacs/gmxpreprocess/convparm.cpp		diff \| blob \| history
src/gromacs/gmxpreprocess/grompp.cpp		diff \| blob \| history
src/gromacs/gmxpreprocess/readir.cpp		diff \| blob \| history
src/gromacs/gmxpreprocess/topio.cpp		diff \| blob \| history
src/gromacs/gmxpreprocess/vsite_parm.cpp		diff \| blob \| history
src/gromacs/listed-forces/disre.cpp		diff \| blob \| history
src/gromacs/listed-forces/orires.cpp		diff \| blob \| history
src/gromacs/mdlib/broadcaststructs.cpp		diff \| blob \| history
src/gromacs/mdlib/calc_verletbuf.cpp		diff \| blob \| history
src/gromacs/mdlib/constr.cpp		diff \| blob \| history
src/gromacs/mdlib/constr.h		diff \| blob \| history
src/gromacs/mdlib/constraintrange.cpp		diff \| blob \| history
src/gromacs/mdlib/forcerec.cpp		diff \| blob \| history
src/gromacs/mdlib/lincs.cpp		diff \| blob \| history
src/gromacs/mdlib/membed.cpp		diff \| blob \| history
src/gromacs/mdlib/perf_est.cpp		diff \| blob \| history
src/gromacs/mdlib/settle.cpp		diff \| blob \| history
src/gromacs/mdlib/shellfc.cpp		diff \| blob \| history
src/gromacs/mdlib/sim_util.cpp		diff \| blob \| history
src/gromacs/mdlib/tests/settle.cpp		diff \| blob \| history
src/gromacs/mdlib/vsite.cpp		diff \| blob \| history
src/gromacs/pbcutil/mshift.cpp		diff \| blob \| history
src/gromacs/pbcutil/mshift.h		diff \| blob \| history
src/gromacs/tools/convert_tpr.cpp		diff \| blob \| history
src/gromacs/topology/idef.cpp		diff \| blob \| history
src/gromacs/topology/idef.h		diff \| blob \| history
src/gromacs/topology/mtop_util.cpp		diff \| blob \| history
src/gromacs/topology/mtop_util.h		diff \| blob \| history
src/gromacs/topology/topology.cpp		diff \| blob \| history
src/gromacs/topology/topology.h		diff \| blob \| history
src/gromacs/topology/topsort.cpp		diff \| blob \| history

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