# # This file is part of the GROMACS molecular simulation package. # # Copyright (c) 2014, by the GROMACS development team, led by # Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl, # and including many others, as listed in the AUTHORS file in the # top-level source directory and at http://www.gromacs.org. # # GROMACS is free software; you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License # as published by the Free Software Foundation; either version 2.1 # of the License, or (at your option) any later version. # # GROMACS is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU # Lesser General Public License for more details. # # You should have received a copy of the GNU Lesser General Public # License along with GROMACS; if not, see # http://www.gnu.org/licenses, or write to the Free Software Foundation, # Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. # # If you want to redistribute modifications to GROMACS, please # consider that scientific software is very special. Version # control is crucial - bugs must be traceable. We will be happy to # consider code for inclusion in the official distribution, but # derived work must not be called official GROMACS. Details are found # in the README & COPYING files - if they are missing, get the # official version at http://www.gromacs.org. # # To help us fund GROMACS development, we humbly ask that you cite # the research papers on the package. Check out http://www.gromacs.org. # This directory provides a unified place for building all kinds of # GROMACS documentation. This includes some "static" content (Doxygen # code documentation, reference manual, install guide, old online HTML # pages), and content generated from the gmx program for the various # tools (man and HTML pages). It also provides the "webpage" target, # that combines all of the above (except man pages in man format) into # a form suitable for automated deployment to the GROMACS website. It # also provides the INSTALL file for the tarball. # # All of the markdown content is configured, and we'd like to do that # at build time rather than configure time (for speed, when not # building markdown content). Also, the way they should be configured # varies with whether the source is a tarball or repo, and which file # is being configured. So several *_IS_POSSIBLE variables are used to # direct the configure-time logic so that all appropriate variables # are set by the time the configure-markdown.cmake.in file is # configured, so that later it can do the configuration of all the # markdown files and the right thing will happen in each case. # Even if we aren't going to make the full webpage, set up to put all # the documentation output in the same place, for convenience set(HTML_OUTPUT_DIR "${CMAKE_CURRENT_BINARY_DIR}/html") file(MAKE_DIRECTORY ${HTML_OUTPUT_DIR}) if (BUILD_IS_INSOURCE) set(MARKDOWN_CONFIGURE_IS_POSSIBLE off) else() set(MARKDOWN_CONFIGURE_IS_POSSIBLE on) endif() find_package(Pandoc) # Set up common infrastructure for configuring markdown at build time. # Do replacement of CMake variables for version strings, etc. The use # of configure-markdown.cmake defers until build time the # configuration of markdown files, which could be faster for all the # configurations that don't make the documentation even though it was # possible, and helps avoid global re-configures if these files # change. set(SCRIPT_TO_CONFIGURE_MARKDOWN ${CMAKE_CURRENT_BINARY_DIR}/configure-markdown.cmake) configure_file(configure-markdown.cmake.in ${SCRIPT_TO_CONFIGURE_MARKDOWN} @ONLY) # Makes a custom command to configure a Markdown file found in the # current source directory with the configure-markdown.make script # produced above. The result is placed in the current binary directory # for future use. function(configure_markdown MARKDOWN_FILE) add_custom_command( OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/${MARKDOWN_FILE} COMMAND ${CMAKE_COMMAND} -D FILE_TO_CONFIGURE=${CMAKE_CURRENT_SOURCE_DIR}/${MARKDOWN_FILE} -D CONFIGURED_FILE=${CMAKE_CURRENT_BINARY_DIR}/${MARKDOWN_FILE} -P ${SCRIPT_TO_CONFIGURE_MARKDOWN} DEPENDS ${SCRIPT_TO_CONFIGURE_MARKDOWN} ${CMAKE_CURRENT_SOURCE_DIR}/${MARKDOWN_FILE} COMMENT "Configuring Markdown" VERBATIM ) endfunction() # Makes a custom command to make single-page HTML from Markdown. Takes # a NAME argument for an output filename prefix, and a list of full # paths to input files to concatenate with Pandoc into the HTML # output. function(make_markdown_html NAME) add_custom_command( OUTPUT ${HTML_OUTPUT_DIR}/${NAME}.html COMMAND ${PANDOC_EXECUTABLE} ${ARGN} -o ${HTML_OUTPUT_DIR}/${NAME}.html -s --toc --css buttondown.css DEPENDS ${ARGN} VERBATIM ) endfunction() # Makes a custom command to make PDF from Markdown. Takes a NAME # argument for an output filename prefix, and a list of full paths to # input files to concatenate with Pandoc into the PDF. function(make_markdown_pdf NAME) add_custom_command( OUTPUT ${HTML_OUTPUT_DIR}/${NAME}.pdf COMMAND ${PANDOC_EXECUTABLE} ${ARGN} -o ${HTML_OUTPUT_DIR}/${NAME}.pdf -s --toc DEPENDS ${ARGN} VERBATIM ) endfunction() # function(make_markdown_multipage_html NAME) # # Make the multi-page HTML install guide # # # TODO This is currently disabled, because the pandoc-specific # # buttondown.css doesn't work with the different kind of output # # makeinfo produces. When we understand better how we want to do # # generation, decide whether we want multi-page HTML output and # # how to make it work well. # # add_custom_command( # OUTPUT ${HTML_OUTPUT_DIR}/${HTML_DIR}/index.html # COMMAND # ${PANDOC_EXECUTABLE} ${ARGN} -o ${NAME}.texi -s # COMMAND # ${MAKEINFO_EXECUTABLE} ${NAME}.texi --html -o ${HTML_OUTPUT_DIR}/${NAME} --css-ref buttondown.css # DEPENDS ${ARGN} # VERBATIM # ) # endfunction() add_subdirectory(install-guide) add_subdirectory(user-guide) add_subdirectory(man) add_subdirectory(old-html) add_subdirectory(doxygen) option(GMX_BUILD_WEBPAGE "Whether to try to configure to build the GROMACS static webpages" OFF) mark_as_advanced(GMX_BUILD_WEBPAGE) option(GMX_BUILD_MANUAL "Whether to try to configure to build the PDF manual" ${GMX_BUILD_WEBPAGE}) mark_as_advanced(GMX_BUILD_MANUAL) if(GMX_BUILD_MANUAL) # Make sure we only do detection of manual-building dependencies # when the user opted in for that. add_subdirectory(manual) endif() set(HTML_BUILD_IS_POSSIBLE OFF) # We can only configure to build the webpage if the user asked for it, # the build is outside of the source dir, and all the components can # be built. There's no need to be talkative if we fail - most people # never need to know. if(GMX_BUILD_WEBPAGE AND GMX_BUILD_HELP AND NOT BUILD_IS_INSOURCE AND MARKDOWN_CONFIGURE_IS_POSSIBLE AND MANUAL_BUILD_IS_POSSIBLE AND PANDOC_EXECUTABLE AND DOXYGEN_EXECUTABLE AND DOXYGEN_MSCGEN_EXECUTABLE) set(HTML_BUILD_IS_POSSIBLE ON) endif() if(HTML_BUILD_IS_POSSIBLE) # For a real build of the webpage, the md5sum of the tarballs must # already be known, and so we may as well require that the real # build of the webpage take place from cmake run from the unpacked # tarball. Then, the *_MD5SUM and *_TARBALL variables will be able # to be set on the cmake command line (e.g. by a Jenkins job # configuration), and we can require that they are set. For local # building of the webpages (e.g. for debugging), those variables # can be left unset, and if so, the download section will not be # constructed. if(NOT SOURCE_IS_SOURCE_DISTRIBUTION) if (SOURCE_TARBALL AND SOURCE_MD5SUM AND REGRESSIONTESTS_TARBALL AND REGRESSIONTESTS_MD5SUM) set(BUILD_DOWNLOAD_SECTION on) else() set(BUILD_DOWNLOAD_SECTION off) endif() else() foreach(VAR SOURCE_MD5SUM REGRESSIONTESTS_MD5SUM SOURCE_TARBALL REGRESSIONTESTS_TARBALL) if(NOT DEFINED ${VAR}) message(FATAL_ERROR "The build of the webpage requires that ${VAR} is set in the cmake cache, e.g. on the CMake command line") endif() endforeach() set(BUILD_DOWNLOAD_SECTION on) endif() # If building the webpage from the repo, then tarballs may not # exist, and if so, it would not make sense to build that part of # the front page from index.md. if(BUILD_DOWNLOAD_SECTION) set(DOWNLOAD_SECTION "# Downloads * Source code - [gromacs-${GMX_VERSION_STRING}.tar.gz](gromacs-${GMX_VERSION_STRING}.tar.gz) (md5sum ${SOURCE_MD5SUM}) Other source code versions may be found at * Regression tests - [regressiontests-${GMX_VERSION_STRING}.tar.gz](regressiontests-${GMX_VERSION_STRING}.tar.gz) (md5sum ${REGRESSIONTESTS_MD5SUM}) ") # Copy the source tarball to the webpage output add_custom_command( OUTPUT ${HTML_OUTPUT_DIR}/gromacs-${GMX_VERSION_STRING}.tar.gz COMMAND ${CMAKE_COMMAND} -E copy ${SOURCE_TARBALL} ${HTML_OUTPUT_DIR}/gromacs-${GMX_VERSION_STRING}.tar.gz VERBATIM ) # Copy the regressiontests tarball to the webpage output add_custom_command( OUTPUT ${HTML_OUTPUT_DIR}/regressiontests-${GMX_VERSION_STRING}.tar.gz COMMAND ${CMAKE_COMMAND} -E copy ${REGRESSIONTESTS_TARBALL} ${HTML_OUTPUT_DIR}/regressiontests-${GMX_VERSION_STRING}.tar.gz VERBATIM ) else() set(DOWNLOAD_SECTION "") endif() # Put the CSS in the HTML output directory add_custom_command( OUTPUT ${HTML_OUTPUT_DIR}/buttondown.css COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/buttondown.css ${HTML_OUTPUT_DIR}/buttondown.css DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/buttondown.css VERBATIM ) list(APPEND extra_webpage_dependencies ${HTML_OUTPUT_DIR}/buttondown.css) # Make the PDF reference guide # TODO Try to make the PDF arrive directly in ${HTML_OUTPUT_DIR} add_custom_command( OUTPUT ${HTML_OUTPUT_DIR}/manual-${GMX_VERSION_STRING}.pdf COMMAND ${CMAKE_COMMAND} -E remove -f ${HTML_OUTPUT_DIR}/manual-${GMX_VERSION_STRING}.pdf COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_BINARY_DIR}/manual/gromacs.pdf ${HTML_OUTPUT_DIR}/manual-${GMX_VERSION_STRING}.pdf # UseLATEX.cmake makes a target called pdf, not ${CMAKE_CURRENT_BINARY_DIR}/manual/gromacs.pdf DEPENDS pdf VERBATIM ) # TODO Move content from the "old" html output into the new user # guide, or delete, as appropriate. if(NOT SOURCE_IS_SOURCE_DISTRIBUTION) # TODO If content remains here once the user guide is in # decent shape, try to make the generated HTML arrive directly # in ${HTML_OUTPUT_DIR} add_custom_target(webpage-html ${CMAKE_COMMAND} -E copy_directory old-html/final ${HTML_OUTPUT_DIR} ) add_dependencies(webpage-html html) else() # In the source distribution, the html pages are already # built, so we can avoid making gmx via the html target add_custom_target(webpage-html ${CMAKE_COMMAND} -E copy_directory ${CMAKE_CURRENT_SOURCE_DIR}/old-html/final ${HTML_OUTPUT_DIR} ) endif() # The Doxygen configuration in doxygen/Doxyfile-common.cmakein # makes all the Doxygen output directly in # ${HTML_OUTPUT_DIR}/doxygen (and makes the directory if it needs # to). # Add other dependencies for doing the webpage build from the real # tarball if(BUILD_DOWNLOAD_SECTION) list(APPEND extra_webpage_dependencies ${HTML_OUTPUT_DIR}/gromacs-${GMX_VERSION_STRING}.tar.gz ${HTML_OUTPUT_DIR}/regressiontests-${GMX_VERSION_STRING}.tar.gz ) endif() configure_markdown(index.md) make_markdown_html(index ${CMAKE_CURRENT_BINARY_DIR}/index.md) # Add a top-level target for the others to hook onto add_custom_target(webpage DEPENDS ${HTML_OUTPUT_DIR}/index.html install-guide user-guide ${HTML_OUTPUT_DIR}/manual-${GMX_VERSION_STRING}.pdf ${extra_webpage_dependencies} VERBATIM ) add_dependencies(webpage webpage-html doc-all) endif()