alexxy/gromacs-spirals.git
6 years agotesting window output master
Anatoly [Thu, 29 Mar 2018 11:46:40 +0000 (14:46 +0300)]
testing window output

6 years agoprobably fixed 2*window instead of window
Anatoly [Thu, 29 Mar 2018 11:45:00 +0000 (14:45 +0300)]
probably fixed 2*window instead of window

6 years agosearching for a bug
Anatoly [Thu, 29 Mar 2018 11:41:43 +0000 (14:41 +0300)]
searching for a bug

6 years agolooking for a bug
Anatoly [Thu, 29 Mar 2018 11:39:22 +0000 (14:39 +0300)]
looking for a bug

6 years agofixes
Anatoly [Thu, 29 Mar 2018 11:31:55 +0000 (14:31 +0300)]
fixes

6 years agominor fixes
Anatoly [Thu, 29 Mar 2018 11:22:16 +0000 (14:22 +0300)]
minor fixes

6 years agofixed
Anatoly [Thu, 29 Mar 2018 11:19:40 +0000 (14:19 +0300)]
fixed

6 years agofixed a lost first element in circles
Anatoly [Thu, 29 Mar 2018 11:18:19 +0000 (14:18 +0300)]
fixed a lost first element in circles

6 years agomonomers[i] to [m]
Anatoly [Thu, 29 Mar 2018 11:07:13 +0000 (14:07 +0300)]
monomers[i] to [m]

6 years agochanged d to lu
Anatoly [Thu, 29 Mar 2018 11:03:21 +0000 (14:03 +0300)]
changed d to lu

6 years agocheking frames number in circles
Anatoly [Thu, 29 Mar 2018 11:00:08 +0000 (14:00 +0300)]
cheking frames number in circles

6 years agostd::cout
Anatoly [Thu, 29 Mar 2018 10:57:31 +0000 (13:57 +0300)]
std::cout

6 years agotesting
Anatoly [Thu, 29 Mar 2018 10:52:53 +0000 (13:52 +0300)]
testing

6 years agofix +i
Anatoly [Thu, 29 Mar 2018 10:51:01 +0000 (13:51 +0300)]
fix +i

6 years agochanging window_kernel
Anatoly [Thu, 29 Mar 2018 10:45:52 +0000 (13:45 +0300)]
changing window_kernel

6 years agotesting
Anatoly [Thu, 29 Mar 2018 10:36:52 +0000 (13:36 +0300)]
testing

6 years agochanged window output
Anatoly [Thu, 29 Mar 2018 10:30:32 +0000 (13:30 +0300)]
changed window output

6 years agochanged kernel
Anatoly [Thu, 29 Mar 2018 10:19:00 +0000 (13:19 +0300)]
changed kernel

6 years agotesting new window_temp design
Anatoly [Thu, 29 Mar 2018 10:17:40 +0000 (13:17 +0300)]
testing new window_temp design

6 years agotesting
Anatoly [Thu, 29 Mar 2018 10:00:24 +0000 (13:00 +0300)]
testing

6 years agotesting
Anatoly [Thu, 29 Mar 2018 09:47:02 +0000 (12:47 +0300)]
testing

6 years agot6esting
Anatoly [Thu, 29 Mar 2018 09:36:43 +0000 (12:36 +0300)]
t6esting

6 years agoadded window flow
Anatoly [Mon, 26 Mar 2018 11:26:26 +0000 (14:26 +0300)]
added window flow

6 years agothrown code into outdoor functions to minimize code in main functions
Anatoly [Mon, 26 Mar 2018 10:01:34 +0000 (13:01 +0300)]
thrown code into outdoor functions to minimize code in main functions
and futher implement window scanning

6 years agoadded
Anatoly [Mon, 26 Mar 2018 09:18:11 +0000 (12:18 +0300)]
added
- steps
- radii
- # of monomers in coil
output
ver 1.0

6 years agofuther dev
Anatoly [Tue, 20 Feb 2018 09:47:38 +0000 (12:47 +0300)]
futher dev

6 years agofixed bug = to ==
Anatoly [Tue, 20 Feb 2018 08:21:55 +0000 (11:21 +0300)]
fixed bug = to ==

6 years agofixes
Anatoly [Tue, 20 Feb 2018 08:17:08 +0000 (11:17 +0300)]
fixes

6 years agochanged if
Anatoly [Tue, 20 Feb 2018 08:16:17 +0000 (11:16 +0300)]
changed if

6 years agoextra case for L0 to be 0
Anatoly [Tue, 20 Feb 2018 08:10:11 +0000 (11:10 +0300)]
extra case for L0 to be 0

6 years agofixed pow(epsi, 2) to epsi
Anatoly [Tue, 20 Feb 2018 08:07:59 +0000 (11:07 +0300)]
fixed pow(epsi, 2) to epsi

6 years agosweep
Anatoly [Tue, 20 Feb 2018 08:05:36 +0000 (11:05 +0300)]
sweep

6 years agof to d
Anatoly [Tue, 20 Feb 2018 07:45:31 +0000 (10:45 +0300)]
f to d

6 years agoadded circles output
Anatoly [Tue, 20 Feb 2018 07:43:49 +0000 (10:43 +0300)]
added circles output

6 years agochanged circles definition from +/- sign change to > < change
Anatoly [Tue, 20 Feb 2018 07:39:30 +0000 (10:39 +0300)]
changed circles definition from +/- sign change to > < change

6 years agohidden extra outputs
Anatoly [Tue, 20 Feb 2018 07:17:00 +0000 (10:17 +0300)]
hidden extra outputs

6 years agochanged L1-6 to L0
Anatoly [Tue, 20 Feb 2018 07:15:08 +0000 (10:15 +0300)]
changed L1-6 to L0

6 years agotest
Anatoly [Tue, 20 Feb 2018 07:01:45 +0000 (10:01 +0300)]
test

6 years agofixing bugs
Anatoly [Tue, 20 Feb 2018 06:54:50 +0000 (09:54 +0300)]
fixing bugs

6 years agoconstant check
Anatoly [Tue, 20 Feb 2018 06:52:53 +0000 (09:52 +0300)]
constant check

6 years agosearching for a bug in while
Anatoly [Tue, 20 Feb 2018 06:49:29 +0000 (09:49 +0300)]
searching for a bug in while

6 years agolooking for a bug
Anatoly [Tue, 20 Feb 2018 06:37:03 +0000 (09:37 +0300)]
looking for a bug

6 years ago>= to >
Anatoly [Mon, 12 Feb 2018 10:18:03 +0000 (13:18 +0300)]
>= to >

6 years agofixes
Anatoly [Mon, 12 Feb 2018 10:15:35 +0000 (13:15 +0300)]
fixes
pow 0.5 to sqrt

6 years agoall double to long double
Anatoly [Mon, 12 Feb 2018 10:05:33 +0000 (13:05 +0300)]
all double to long double

6 years agotryed to find a solution
Anatoly [Mon, 12 Feb 2018 09:57:42 +0000 (12:57 +0300)]
tryed to find a solution

6 years agodouble to long double
Anatoly [Mon, 12 Feb 2018 09:51:38 +0000 (12:51 +0300)]
double to long double
> to =>

6 years agochange pow(x,0.5) to std::sqrt
Anatoly [Mon, 12 Feb 2018 09:46:14 +0000 (12:46 +0300)]
change pow(x,0.5) to std::sqrt

Signed-off-by: Anatoly <Titov_AI@pnpi.nrcki.ru>
6 years agophase 1 seems to be done
Anatoly [Mon, 12 Feb 2018 08:11:14 +0000 (11:11 +0300)]
phase 1 seems to be done

6 years agofixed a bug with 1 'while' run through
Anatoly [Mon, 12 Feb 2018 08:04:52 +0000 (11:04 +0300)]
fixed a bug with 1 'while' run through

6 years agotesting
Anatoly [Mon, 12 Feb 2018 08:01:58 +0000 (11:01 +0300)]
testing

6 years agotesting
Anatoly [Mon, 12 Feb 2018 07:50:06 +0000 (10:50 +0300)]
testing

6 years agotesting
Anatoly [Mon, 12 Feb 2018 07:20:17 +0000 (10:20 +0300)]
testing

6 years agofixes
Anatoly [Mon, 12 Feb 2018 07:08:51 +0000 (10:08 +0300)]
fixes

6 years agolinear kernel v1
Anatoly [Mon, 12 Feb 2018 06:46:38 +0000 (09:46 +0300)]
linear kernel v1

6 years agoadded circles search
Anatoly [Fri, 9 Feb 2018 13:21:17 +0000 (16:21 +0300)]
added circles search

6 years agochanged to linear kernel algo // test pasta
Anatoly [Fri, 9 Feb 2018 11:57:04 +0000 (14:57 +0300)]
changed to linear kernel algo // test pasta

6 years agofixed +2 to kernel affecting circles
Anatoly Titov [Tue, 12 Dec 2017 10:30:28 +0000 (13:30 +0300)]
fixed +2 to kernel affecting circles

6 years agofixed -nan issue
Anatoly Titov [Tue, 12 Dec 2017 10:27:04 +0000 (13:27 +0300)]
fixed -nan issue

6 years agofixed -> to .
Anatoly Titov [Tue, 12 Dec 2017 10:16:03 +0000 (13:16 +0300)]
fixed -> to .

6 years ago- fixed fprintf codes
Anatoly Titov [Tue, 12 Dec 2017 10:14:30 +0000 (13:14 +0300)]
- fixed fprintf codes
- fixed
end - > back
begin -> front

6 years agofixed fprintf codes
Anatoly Titov [Tue, 12 Dec 2017 10:09:25 +0000 (13:09 +0300)]
fixed fprintf codes

6 years agoadded extra case for kernel dist
Anatoly Titov [Tue, 12 Dec 2017 10:03:10 +0000 (13:03 +0300)]
added extra case for kernel dist

6 years agofixed fprintf codes
Anatoly Titov [Tue, 12 Dec 2017 09:46:37 +0000 (12:46 +0300)]
fixed fprintf codes

6 years agoremoved extra FILE
Anatoly Titov [Tue, 12 Dec 2017 09:43:58 +0000 (12:43 +0300)]
removed extra FILE

6 years agofixed long double
Anatoly Titov [Tue, 12 Dec 2017 09:42:29 +0000 (12:42 +0300)]
fixed long double

6 years agoadded output files
Anatoly Titov [Tue, 12 Dec 2017 09:38:57 +0000 (12:38 +0300)]
added output files

6 years agoadded evaluations for each frame
Anatoly Titov [Tue, 12 Dec 2017 09:29:07 +0000 (12:29 +0300)]
added evaluations for each frame

6 years agonext
Anatoly Titov [Fri, 3 Nov 2017 11:48:19 +0000 (14:48 +0300)]
next

6 years agonext
Anatoly Titov [Fri, 3 Nov 2017 11:46:17 +0000 (14:46 +0300)]
next

6 years agolooking for a bug
Anatoly Titov [Fri, 3 Nov 2017 11:42:07 +0000 (14:42 +0300)]
looking for a bug

6 years agofixing
Anatoly Titov [Fri, 3 Nov 2017 11:32:42 +0000 (14:32 +0300)]
fixing

6 years agofix a bug
Anatoly Titov [Fri, 3 Nov 2017 11:27:42 +0000 (14:27 +0300)]
fix a bug

6 years agotesting
Anatoly Titov [Fri, 3 Nov 2017 11:26:25 +0000 (14:26 +0300)]
testing

6 years agoadded sel_list and masses
Anatoly Titov [Fri, 3 Nov 2017 11:15:07 +0000 (14:15 +0300)]
added sel_list and masses

6 years agoalgo finds circles
Anatoly Titov [Fri, 3 Nov 2017 10:30:16 +0000 (13:30 +0300)]
algo finds circles

6 years agoAdd simple template
Alexey Shvetsov [Thu, 12 Oct 2017 09:38:58 +0000 (12:38 +0300)]
Add simple template