BioD PNPI Git Repos - alexxy/gromacs.git/tree

drwxr-xr-x		..
-rw-r--r--	391	.clang-tidy	blob \| history \| raw
-rw-r--r--	13551	CMakeLists.txt	blob \| history \| raw
-rw-r--r--	7444	checkpoint.cpp	blob \| history \| raw
-rw-r--r--	2771	comparison_helpers.h	blob \| history \| raw
-rw-r--r--	4182	compressed_x_output.cpp	blob \| history \| raw
-rw-r--r--	6880	constantacceleration.cpp	blob \| history \| raw
-rw-r--r--	12328	densityfittingmodule.cpp	blob \| history \| raw
-rw-r--r--	3172	dispersion_correction.cpp	blob \| history \| raw
-rw-r--r--	2750	domain_decomposition.cpp	blob \| history \| raw
-rw-r--r--	7644	energycomparison.cpp	blob \| history \| raw
-rw-r--r--	5714	energycomparison.h	blob \| history \| raw
-rw-r--r--	6890	energyreader.cpp	blob \| history \| raw
-rw-r--r--	6706	energyreader.h	blob \| history \| raw
-rw-r--r--	6550	ewaldsurfaceterm.cpp	blob \| history \| raw
-rw-r--r--	23590	exactcontinuation.cpp	blob \| history \| raw
-rw-r--r--	12903	freeenergy.cpp	blob \| history \| raw
-rw-r--r--	10332	freezegroups.cpp	blob \| history \| raw
-rw-r--r--	4671	grompp.cpp	blob \| history \| raw
-rw-r--r--	3263	helpwriting.cpp	blob \| history \| raw
-rw-r--r--	5411	initialconstraints.cpp	blob \| history \| raw
-rw-r--r--	4037	interactiveMD.cpp	blob \| history \| raw
-rw-r--r--	4755	mdruncomparison.h	blob \| history \| raw
-rw-r--r--	5319	mimic.cpp	blob \| history \| raw
-rw-r--r--	7879	minimize.cpp	blob \| history \| raw
-rw-r--r--	12745	moduletest.cpp	blob \| history \| raw
-rw-r--r--	9447	moduletest.h	blob \| history \| raw
-rw-r--r--	9719	multiple_time_stepping.cpp	blob \| history \| raw
-rw-r--r--	5422	multisim.cpp	blob \| history \| raw
-rw-r--r--	9097	multisimtest.cpp	blob \| history \| raw
-rw-r--r--	6171	multisimtest.h	blob \| history \| raw
-rw-r--r--	2555	nonbonded_bench.cpp	blob \| history \| raw
-rw-r--r--	6333	normalmodes.cpp	blob \| history \| raw
-rw-r--r--	3010	orires.cpp	blob \| history \| raw
-rw-r--r--	4437	outputfiles.cpp	blob \| history \| raw
-rw-r--r--	15791	periodicactions.cpp	blob \| history \| raw
-rw-r--r--	5749	periodicactions.h	blob \| history \| raw
-rw-r--r--	2793	periodicactions_basic.cpp	blob \| history \| raw
-rw-r--r--	2908	periodicactions_constraints.cpp	blob \| history \| raw
-rw-r--r--	2827	periodicactions_coupling.cpp	blob \| history \| raw
-rw-r--r--	10498	pmetest.cpp	blob \| history \| raw
-rw-r--r--	10392	pull.cpp	blob \| history \| raw
drwxr-xr-x	-	refdata	tree \| history
-rw-r--r--	4474	replicaexchange.cpp	blob \| history \| raw
-rw-r--r--	14158	replicaexchange_equivalence.cpp	blob \| history \| raw
-rw-r--r--	12208	rerun.cpp	blob \| history \| raw
-rw-r--r--	7286	simple_mdrun.cpp	blob \| history \| raw
-rw-r--r--	18307	simulator.cpp	blob \| history \| raw
-rw-r--r--	4682	simulatorcomparison.cpp	blob \| history \| raw
-rw-r--r--	3313	simulatorcomparison.h	blob \| history \| raw
-rw-r--r--	5145	swapcoords.cpp	blob \| history \| raw
-rw-r--r--	7211	tabulated_bonded_interactions.cpp	blob \| history \| raw
-rw-r--r--	15910	termination.cpp	blob \| history \| raw
-rw-r--r--	3602	terminationhelper.cpp	blob \| history \| raw
-rw-r--r--	3769	terminationhelper.h	blob \| history \| raw
-rw-r--r--	5448	tpitest.cpp	blob \| history \| raw
-rw-r--r--	5110	trajectory_writing.cpp	blob \| history \| raw
-rw-r--r--	16942	trajectorycomparison.cpp	blob \| history \| raw
-rw-r--r--	7689	trajectorycomparison.h	blob \| history \| raw
-rw-r--r--	5076	trajectoryreader.cpp	blob \| history \| raw
-rw-r--r--	5536	trajectoryreader.h	blob \| history \| raw
-rw-r--r--	29667	virtualsites.cpp	blob \| history \| raw