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alexxy/gromacs.git
2013-10-20 Mark AbrahamRemove html target from and excessive PDFs for manual commit | commitdiff | tree | snapshot
2013-10-18 Teemu MurtolaUpgrade layout file to support Doxygen >=1.8. commit | commitdiff | tree | snapshot
2013-10-17 Mark AbrahamMove mdrun trajectory writing into wrapper function commit | commitdiff | tree | snapshot
2013-10-16 Teemu MurtolaRemove latex help export. commit | commitdiff | tree | snapshot
2013-10-16 Mark AbrahamMove manual repo into code repo, and make it build commit | commitdiff | tree | snapshot
2013-10-15 Teemu MurtolaFix/improve installation directory logic. commit | commitdiff | tree | snapshot
2013-10-10 Mark AbrahamIntroduced MPI initialization counter commit | commitdiff | tree | snapshot
2013-10-08 Mark AbrahamRemove some unused variables from MD loop commit | commitdiff | tree | snapshot
2013-10-07 Teemu MurtolaImprove markup substitution in HelpWriterContext. commit | commitdiff | tree | snapshot
2013-10-07 Teemu MurtolaHTML export from the wrapper binary. commit | commitdiff | tree | snapshot
2013-10-06 Mark AbrahamFixed triggering of CPU acceleration-scheme detection commit | commitdiff | tree | snapshot
2013-10-04 Mark AbrahamFurther consolidation of commrec initialization commit | commitdiff | tree | snapshot
2013-10-04 Mark AbrahamMore consolidation of MPI initialization commit | commitdiff | tree | snapshot
2013-10-04 Teemu MurtolaClean up CTest usage. commit | commitdiff | tree | snapshot
2013-10-04 Teemu MurtolaReorganize static/shared library management. commit | commitdiff | tree | snapshot
2013-10-03 Teemu MurtolaCMake helper for tracking cache variable changes. commit | commitdiff | tree | snapshot
2013-10-03 Teemu MurtolaRemove unused shift_util.c. commit | commitdiff | tree | snapshot
2013-10-03 Teemu MurtolaImprove diagnostics with empty selections. commit | commitdiff | tree | snapshot
2013-10-03 Teemu MurtolaMan page export from the wrapper binary. commit | commitdiff | tree | snapshot
2013-10-03 Teemu MurtolaUse filenm.c data for FileNameOption. commit | commitdiff | tree | snapshot
2013-10-03 Teemu MurtolaFix warnings with Doxygen 1.8.5. commit | commitdiff | tree | snapshot
2013-10-01 Mark AbrahamBroke some useless dependencies commit | commitdiff | tree | snapshot
2013-10-01 Mark AbrahamSplit MPI initialization from t_commrec construction commit | commitdiff | tree | snapshot
2013-09-30 David van der... Change name of gmxdump to dump and gmxcheck to check commit | commitdiff | tree | snapshot
2013-09-29 Teemu MurtolaRemove obsolete efHAT and src/ngmx/dlgtest. commit | commitdiff | tree | snapshot
2013-09-29 David van der... Fixes bug in processing virtual_sitesn in grompp. commit | commitdiff | tree | snapshot
2013-09-28 Teemu MurtolaUse git version info in Doxygen. commit | commitdiff | tree | snapshot
2013-09-26 Mark AbrahamUn-duplicate gmx_gettime code commit | commitdiff | tree | snapshot
2013-09-26 Teemu MurtolaMerge "Merge branch release-4-6" commit | commitdiff | tree | snapshot
2013-09-26 Mark AbrahamMerge branch release-4-6 commit | commitdiff | tree | snapshot
2013-09-26 Alexey Shvetsovg_tune_pme: Clean up -Wunused-parameter warnings commit | commitdiff | tree | snapshot
2013-09-26 David van der... Made MW of the Vsite particle type. commit | commitdiff | tree | snapshot
2013-09-26 Alexey Shvetsovprograms: clean up -Wunused-parameter warnings commit | commitdiff | tree | snapshot
2013-09-26 Mark AbrahamRemove mdrun -ionize feature commit | commitdiff | tree | snapshot
2013-09-26 Mark AbrahamRemove General Coupling Theory stuff commit | commitdiff | tree | snapshot
2013-09-26 Teemu Murtolathread_mpi: Clean up -Wunused-parameter warnings. commit | commitdiff | tree | snapshot
2013-09-26 Teemu MurtolaCMake helper for dependent cache variables. commit | commitdiff | tree | snapshot
2013-09-24 Berk Hessoptimized generic SIMD invsqrt commit | commitdiff | tree | snapshot
2013-09-24 Teemu MurtolaRemove old generated HTML files. commit | commitdiff | tree | snapshot
2013-09-24 Teemu MurtolaRemove src/contrib/prfn.c and related code. commit | commitdiff | tree | snapshot
2013-09-23 Teemu MurtolaMerge "Merge branch 'release-4-6'" commit | commitdiff | tree | snapshot
2013-09-23 Teemu MurtolaRemove obsolete tools. commit | commitdiff | tree | snapshot
2013-09-21 Berk Hessfixed multiple distance restraints with OpenMP commit | commitdiff | tree | snapshot
2013-09-21 Teemu MurtolaCMake helper for multichoice options. commit | commitdiff | tree | snapshot
2013-09-21 David van der... Moved ngmx to C++, renamed it to view. commit | commitdiff | tree | snapshot
2013-09-20 Mark AbrahamRemove repeat sfree(state->nosehoover_xi) commit | commitdiff | tree | snapshot
2013-09-20 Mark AbrahamMerge branch 'release-4-6' commit | commitdiff | tree | snapshot
2013-09-20 Mark AbrahamDescribed another way g_tune_pme might reasonably fail commit | commitdiff | tree | snapshot
2013-09-20 Mark AbrahamFix total time measurement with separate PME nodes commit | commitdiff | tree | snapshot
2013-09-20 Teemu MurtolaCMake cleanup. commit | commitdiff | tree | snapshot
2013-09-20 Teemu MurtolaMerge branch 'release-4-6' commit | commitdiff | tree | snapshot
2013-09-19 Teemu MurtolaMake uncrustify.sh more verbose on errors. commit | commitdiff | tree | snapshot
2013-09-19 Mark AbrahamFixed reading history_t from checkpoint commit | commitdiff | tree | snapshot
2013-09-19 Mark AbrahamFixed g_tune_pme assumption that MPI is available commit | commitdiff | tree | snapshot
2013-09-19 Teemu MurtolaUniform code path for writing out console help. commit | commitdiff | tree | snapshot
2013-09-19 Teemu MurtolaFramework for help export from wrapper binary. commit | commitdiff | tree | snapshot
2013-09-18 Berk Hessmade free energy PME kernel 40% faster commit | commitdiff | tree | snapshot
2013-09-18 Mark AbrahamRemove forcefield-scan feature commit | commitdiff | tree | snapshot
2013-09-16 Michael ShirtsFixing manual for sc-coul description. commit | commitdiff | tree | snapshot
2013-09-16 Berk Hessmdrun without OpenMP with thread-MPI now uses all cores commit | commitdiff | tree | snapshot
2013-09-13 Berk Hesscorrected grompp constraint/DOF warning with vsites commit | commitdiff | tree | snapshot
2013-09-13 Teemu MurtolaAdd option to build a standalone mdrun binary only. commit | commitdiff | tree | snapshot
2013-09-13 Teemu MurtolaMove mdrun into the wrapper binary. commit | commitdiff | tree | snapshot
2013-09-13 Teemu MurtolaMake parse_common_args() not exit. commit | commitdiff | tree | snapshot
2013-09-13 Teemu MurtolaRemove unused -man output formats. commit | commitdiff | tree | snapshot
2013-09-09 Teemu MurtolaMake gmx_ana_pos_t a C++ class. commit | commitdiff | tree | snapshot
2013-09-09 Teemu MurtolaAdd some legends to C++ tool output. commit | commitdiff | tree | snapshot
2013-09-08 Teemu MurtolaRemove duplicate .nr members from selection structs. commit | commitdiff | tree | snapshot
2013-09-08 Teemu MurtolaRemove gmx_ana_indexmap_t::bMapStatic. commit | commitdiff | tree | snapshot
2013-09-08 Teemu MurtolaMove gmx_ana_pos_t::g into gmx_ana_indexmap_t. commit | commitdiff | tree | snapshot
2013-09-06 Teemu MurtolaSupport for parallel data modules. commit | commitdiff | tree | snapshot
2013-09-05 Teemu MurtolaAbstractAnalysisData module handling into a separate... commit | commitdiff | tree | snapshot
2013-09-02 Magnus LundborgSet upper case of FFTW variable at the right place. commit | commitdiff | tree | snapshot
2013-09-01 Teemu MurtolaMerge "Merge branch release-4-6 into master" commit | commitdiff | tree | snapshot
2013-08-30 David van der... Updated g_cluster commit | commitdiff | tree | snapshot
2013-08-30 Teemu MurtolaClean-up and improvements in C++ tools. commit | commitdiff | tree | snapshot
2013-08-25 Mark AbrahamSplit up Verlet SIMD kernels for faster compilation commit | commitdiff | tree | snapshot
2013-08-25 Mark AbrahamFix detection and suggestion in gmx_cpuid for IBM QPX commit | commitdiff | tree | snapshot
2013-08-25 Berk Hessintroduced nbnxn data structure for bounding boxes commit | commitdiff | tree | snapshot
2013-08-25 Mark AbrahamFixes for Bluegene/Q commit | commitdiff | tree | snapshot
2013-08-25 Mark AbrahamConsolidated NBNxN SIMD kernel utility routines commit | commitdiff | tree | snapshot
2013-08-25 Mark AbrahamFix minor wallcycle output issues commit | commitdiff | tree | snapshot
2013-08-25 Mark AbrahamFixed GMX_DD_DUMP_GRID commit | commitdiff | tree | snapshot
2013-08-24 Teemu MurtolaFine-tune copyright printing. commit | commitdiff | tree | snapshot
2013-08-24 Teemu Murtola[RFC] Really uniform startup path for all binaries. commit | commitdiff | tree | snapshot
2013-08-21 Teemu MurtolaStatistics for gmx-distance. commit | commitdiff | tree | snapshot
2013-08-21 Teemu MurtolaLifetime statistics into gmx-select. commit | commitdiff | tree | snapshot
2013-08-20 Mark AbrahamRemove OpenMM commit | commitdiff | tree | snapshot
2013-08-20 Berk Hessfixed parallel normal modes with PME commit | commitdiff | tree | snapshot
2013-08-16 Teemu MurtolaReplacement for g_bond and g_dist. commit | commitdiff | tree | snapshot
2013-08-15 Mark AbrahamProductive afternoon of meetings... more quotes! commit | commitdiff | tree | snapshot
2013-08-11 Teemu MurtolaSupport for multiple analysis data sets in modules. commit | commitdiff | tree | snapshot
2013-08-11 Teemu MurtolaBase support for multiple analysisdata data sets. commit | commitdiff | tree | snapshot
2013-08-10 Teemu MurtolaRemove superfluous selection names from refdata. commit | commitdiff | tree | snapshot
2013-08-10 Teemu MurtolaAdd check for unsorted index groups in selections. commit | commitdiff | tree | snapshot
2013-08-09 Teemu MurtolaTreat exceptions better in interactive selections. commit | commitdiff | tree | snapshot
2013-08-09 Mark AbrahamReordered FFTW fatal error; avoids using unset variables commit | commitdiff | tree | snapshot
2013-08-05 Mark AbrahamFixed reference SIMD code to work with MSVC commit | commitdiff | tree | snapshot
2013-08-05 Teemu MurtolaAdd unit tests for index groups in selections. commit | commitdiff | tree | snapshot
2013-08-04 Teemu MurtolaAdd unit test coverage for simple selection keywords. commit | commitdiff | tree | snapshot
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