BioD PNPI Git Repos - alexxy/gromacs.git/shortlog

biod.pnpi.spb.ru / alexxy / gromacs.git / shortlog

2010-08-03	Szilard Pall	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree \| snapshot
2010-08-03	Szilard Pall	minor addition to previus gcc 4.1.x disabling commit	commit \| commitdiff \| tree \| snapshot
2010-08-03	Szilard Pall	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree \| snapshot
2010-08-03	Szilard Pall	Removed gcc 4.1.x check as bug 431 turned out to be...	commit \| commitdiff \| tree \| snapshot
2010-08-03	David van der...	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree \| snapshot
2010-08-03	David van der...	Fixed bug 487 according to provided patch.	commit \| commitdiff \| tree \| snapshot
2010-08-03	David van der...	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree \| snapshot
2010-08-03	David van der...	Fixed documentation text according to bugzilla 486	commit \| commitdiff \| tree \| snapshot
2010-08-02	Christoph Junghans	Merge remote branch 'origin/release-4-5-patches'	commit \| commitdiff \| tree \| snapshot
2010-08-02	Erik Lindahl	Merge branch 'release-4-5-patches' of git.gromacs.org...	commit \| commitdiff \| tree \| snapshot
2010-08-02	Erik Lindahl	Modified TER record writing behaviour (only add after...	commit \| commitdiff \| tree \| snapshot
2010-08-02	Christoph Junghans	make GMXRC.{bash,csh,zsh} export PKG_CONFIG_PATH	commit \| commitdiff \| tree \| snapshot
2010-08-02	Christoph Junghans	fixed linking of inputrec.h	commit \| commitdiff \| tree \| snapshot
2010-08-02	Erik Lindahl	Merge branch 'release-4-5-patches' of git.gromacs.org...	commit \| commitdiff \| tree \| snapshot
2010-08-02	Erik Lindahl	Fixed build issue for template program in double precision	commit \| commitdiff \| tree \| snapshot
2010-08-02	Berk Hess	corrected LJ on H of charmm tips3p	commit \| commitdiff \| tree \| snapshot
2010-08-02	Sander Pronk	Added an uninstall target to CMake builds.	commit \| commitdiff \| tree \| snapshot
2010-08-02	Christoph Junghans	updated ignore files	commit \| commitdiff \| tree \| snapshot
2010-08-02	Rossen Apostolov	New beta release.	commit \| commitdiff \| tree \| snapshot
2010-08-02	Rossen Apostolov	New beta release.	commit \| commitdiff \| tree \| snapshot
2010-08-02	Sander Pronk	Added missing .h file.	commit \| commitdiff \| tree \| snapshot
2010-08-02	Pär Bjelkmar	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree \| snapshot
2010-08-02	Pär Bjelkmar	Added CHARMM references	commit \| commitdiff \| tree \| snapshot
2010-08-02	Erik Lindahl	Removed unused variable that caused a warning	commit \| commitdiff \| tree \| snapshot
2010-08-02	Erik Lindahl	Temporarily disabled double precision SSE2 generalized...	commit \| commitdiff \| tree \| snapshot
2010-08-02	Erik Lindahl	Fixed error in (unused) SSE2 double precision inline...	commit \| commitdiff \| tree \| snapshot
2010-08-02	Sander Pronk	Fixed shared library build by removing references to...	commit \| commitdiff \| tree \| snapshot
2010-08-01	Roland Schulz	include sys/types before regex for broken regex.h	commit \| commitdiff \| tree \| snapshot
2010-08-01	Erik Lindahl	Modified index processing to reinstate residue-splittin...	commit \| commitdiff \| tree \| snapshot
2010-08-01	Erik Lindahl	Added ion classes to residuetypes.dat	commit \| commitdiff \| tree \| snapshot
2010-08-01	David van der...	Merge branch 'release-4-5-patches' of git.gromacs.org...	commit \| commitdiff \| tree \| snapshot
2010-08-01	David van der...	Moved pdb2top.h from src/kernel to include to allow...	commit \| commitdiff \| tree \| snapshot
2010-08-01	Berk	added nstpcouple-nlist change with twin-range in grompp...	commit \| commitdiff \| tree \| snapshot
2010-08-01	Roland Schulz	include sys/types before regex for broken regex.h	commit \| commitdiff \| tree \| snapshot
2010-08-01	Roland Schulz	fix spelling etc epc	commit \| commitdiff \| tree \| snapshot
2010-08-01	Roland Schulz	added missing initialization	commit \| commitdiff \| tree \| snapshot
2010-07-31	David van der...	Renamed typename to my_typename in index.c since typena...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Replaced non-thread-safe calls to ctime() with our...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	minor update for nst change	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	added mdp parameters nsttcouple and nstpcouple	commit \| commitdiff \| tree \| snapshot
2010-07-30	Christoph Junghans	cmake: make GSL fully optional	commit \| commitdiff \| tree \| snapshot
2010-07-30	Christoph Junghans	merged parts of the debian patch set	commit \| commitdiff \| tree \| snapshot
2010-07-30	Christoph Junghans	removed old motif stuff from statutil.h	commit \| commitdiff \| tree \| snapshot
2010-07-30	Christoph Junghans	remove some deprecated headers, which are not used...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Sander Pronk	More onerous locking of open_files in gmx_fio.	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Added portable gmx_ctime_r() to enable replacement...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Replaced localtime with localtime_r() on unix and local...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Replaced readdir() with readdir_r() to avoid future...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	copied VV initial T fix from md.c to gmx_membed.c ...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	print_date_and_time now only calls ctime when fplog...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	all em integrators now set the runtime	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-30	Erik Lindahl	Ported x86-64 single precision SSE2 all-vs-all patch...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Sander Pronk	Fixed ffclose bug in futil.c, gmx_fio_close now checks...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Sander Pronk	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-30	Sander Pronk	Fixed a potential mutex problem in gmx_fio.c	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	made integrator nm work in parallel	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	commented out nthreads and threadid in t_commrec to...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Berk	corrected pdb2gmx watermodel None counter print	commit \| commitdiff \| tree \| snapshot
2010-07-30	Christoph Junghans	switched to the right gsl define (HAVE_LIBGSL) in cmake...	commit \| commitdiff \| tree \| snapshot
2010-07-30	Christoph Junghans	added right threads flag in cmake pkg-config files	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	updated the #define names for amber99sb and amber99sb...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	updated the charmm ff comments for the new water model...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	updated the charmm ff comments for the new water model...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Rossen Apostolov	Added *.pc.cmakein files for distribution	commit \| commitdiff \| tree \| snapshot
2010-07-29	Rossen Apostolov	Removed OpenMM interface from autoconf, use CMake inste...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Christoph Junghans	cmake creates pc files now	commit \| commitdiff \| tree \| snapshot
2010-07-29	Christoph Junghans	tell aclocal about config dir	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Commented out calls to double prec. SSE2 all-vs-all...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Worked around cross-inclusion problem between grompp...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Removed deprecated nsb.h header	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Changed index group analysis to only create water_and_i...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-29	Rossen Apostolov	Fixed a typo in previous Makefile.am commit	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	increased print space for index group names	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Added residuedefinitions for water, and introduced...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Rossen Apostolov	Added for distribution some extra files needed by CMake.	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Reverted incorrect Makefile edit earlier today	commit \| commitdiff \| tree \| snapshot
2010-07-29	Rossen Apostolov	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-29	Rossen Apostolov	Fixed typos in previous commit.	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	corrected the Amber (unused) #define	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	put ion molecule definitions for GROMOS and OPLS back...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Rossen Apostolov	Added missing assembly files in nonbonded/nb_kernel_x86...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree \| snapshot
2010-07-29	Erik Lindahl	Improved chain separation detection for pdb2gmx, and...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	removed a few type casts from enxio.c	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	updated genion for the new ion name convention	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	ion molecule, residue and atom names are now capitals...	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk Hess	completed partial rename of CYN to CYS for Amber	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	changed FE couple moltype strcmp to strcasecmp	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	replaced all size_t in t_enxblock by int to avoid casts	commit \| commitdiff \| tree \| snapshot
2010-07-29	Sander Pronk	.edr block gmxdump fixes.	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	added 12-6 wall potential	commit \| commitdiff \| tree \| snapshot
2010-07-29	Berk	minor format fix for calcgrid.c	commit \| commitdiff \| tree \| snapshot
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