alexxy/gromacs.git
2018-01-16 Mark AbrahamMerge "Merge release-2018 into master"
2018-01-16 Roland SchulzMerge release-2018 into master
2018-01-16 Aleksei IupinovAlways write the input MDP file for testing just before...
2018-01-11 Aleksei IupinovMove OctaneSandwich.mdp and spc2-IMD.mdp into strings
2018-01-11 Aleksei IupinovRemove unused alanine_vsite.mdp
2018-01-11 Mark AbrahamRemove contrib directory
2018-01-11 Mark AbrahamVersion 2018
2018-01-11 Mark AbrahamAnnounce in user log files that features are deprecated.
2018-01-11 Roland SchulzFix GMX_ENABLE_AVX512_TESTS being internal
2018-01-10 Mark AbrahamFix automated GPU ID assignment
2018-01-10 Szilárd PállUser guide updates to GPU section
2018-01-10 Szilárd PállRelease notes tweaks
2018-01-10 Mark AbrahamAdd release notes to source repo
2018-01-10 Erik LindahlImprove pdb2gmx for nonstandard residue types
2018-01-10 Szilárd PállInstall guide updates
2018-01-10 Szilárd PállEnvironment variable docs maintenance
2018-01-10 Aleksei IupinovDo not print PME counter breakdown if it's empty
2018-01-10 Mark AbrahamHandle erroneous command line args better
2018-01-10 Erik LindahlClarified gmx rmsf documentation
2018-01-09 Berk HessReword CPU/GPU imbalance notes
2018-01-09 Mark AbrahamDeactivate autoselect of PME on GPU on separate rank
2018-01-09 Mark AbrahamClean up user guide for release
2018-01-09 Mark AbrahamMerge branch release-2016 into release-2018
2018-01-09 Berk HessDo not turn on DLB at replica exchange
2018-01-08 Berk HessFix triclinic domain decomposition bug
2018-01-08 Carsten KutznerFix a few typos in SIMD documentation
2018-01-05 Roland SchulzRemove unused defines
2018-01-05 Erik LindahlTest that nvcc/host compiler combo works
2018-01-05 Erik LindahlMake TNG writing work with multiple identical steps
2018-01-05 Erik LindahlAdd AVX_512 and KNC symbols to FFTW SIMD test
2018-01-05 Mark AbrahamRemove FindCUDA from source tarball
2018-01-04 Erik LindahlImprove frame time/step handling in trjconv
2018-01-04 Mark AbrahamMerge branch release-2018
2018-01-04 Erik LindahlImplement changes for CMake policy 0068
2018-01-04 Mark AbrahamAdd test config of GPU build on slave without GPU
2018-01-04 Paul BauerFix gmx msd when using COM removal and molecules
2018-01-03 Erik LindahlFix trjconv for tdump<frame timestep
2018-01-03 Erik LindahlFix index error in gmx chi
2018-01-03 Paul BauerCorrect dihedral restraint section in Manual
2018-01-03 Mark AbrahamAdd cool quote
2018-01-03 Erik LindahlFix complexity for large exclusion orders
2018-01-03 Mark AbrahamFix duplicate warning
2018-01-03 Erik LindahlDon't allow multiple energy groups for GPU runs
2018-01-03 Erik LindahlRemove duplications in GMXLIB search paths
2018-01-03 Erik LindahlAvoid FTZ triggering simd test failures
2018-01-02 Erik LindahlDocument required position restraint files
2018-01-02 Erik LindahlAllow empty lines in hdb files
2018-01-02 Erik LindahlFix OpenCL compiles on Mac OS
2018-01-02 Mark AbrahamFix membed by calling the proper mtop finalization...
2018-01-02 Erik LindahlImprove manual from comments by Gang Liu
2018-01-02 Erik LindahlMake it explicit that time units apply to begin/end...
2018-01-02 Erik LindahlDon't require matching names between rtp and tdb files
2018-01-02 Erik LindahlDon't write reference pull group 0 to log
2018-01-01 Erik LindahlFix gmx density for non-mass calculations
2018-01-01 Erik LindahlClarify XTC error message
2017-12-30 Mark AbrahamFirst release candidate for version 2018
2017-12-29 Mark AbrahamSeparate canDetectGpus and findGpus futher, and fix...
2017-12-28 Roland SchulzReplace GMX_ALIGNED with alignas and SIMD alignment...
2017-12-28 David van der... Fixes and updates for xplor2gml.pl and atom_nom.tbl
2017-12-27 Mark AbrahamSilence POWER8 compiler warnings
2017-12-26 Roland SchulzFix quote
2017-12-26 Erik LindahlFix builds on ARM & clarify (ARM) GPU support
2017-12-22 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-21 Mark AbrahamMerge branch release-5-1 into release-2016
2017-12-21 Mark AbrahamBump minor version for theoretical new release
2017-12-21 Pascal MerzDocumentation and fixes for physical validation
2017-12-21 Mark AbrahamUpdate double-precision test configurations
2017-12-21 Mark AbrahamVersion 5.1.5
2017-12-21 Roland SchulzUpdate checks for BuildOwnFFT
2017-12-20 Carsten KutznerDestruct MDModules/force providers prior to calling...
2017-12-20 Aleksei IupinovSet GMX_GPU_AUTO to FALSE with GMX_GPU defined
2017-12-20 Mark AbrahamUse new defaultRealTolerance() to stabilise some tests
2017-12-20 Mark AbrahamMerge "Merge branch release-2016 into release-2018...
2017-12-20 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-20 Aleksei IupinovRemove potentially wrong "per user request" note from...
2017-12-19 Paul BauerRemoved -skip option from gmx energy
2017-12-19 Berk HessMake acceleration correction VCM mode work
2017-12-19 Mark AbrahamThird beta release of 2018
2017-12-19 Mark AbrahamFix table tests and improve table construction
2017-12-19 Berk HessMake oversubscription warning consistent
2017-12-19 Carsten KutznerFix electric field .mdp documentation
2017-12-19 Erik LindahlUse reduced default tolerances for tpx comparison
2017-12-18 Roland SchulzFix cmake error with emacs lock files in place
2017-12-17 Roland SchulzMerge branch release-2018
2017-12-17 Roland SchulzFix typo introduced in b1b1163a245
2017-12-17 Roland SchulzChange avx_128_fma build to double
2017-12-17 Roland SchulzSupport Simd4N for SimdRealWidth<4
2017-12-15 Roland SchulzRemove incorrect/misleading OpenMP message
2017-12-15 Roland SchulzRevert "Use table Ewald for Skylake"
2017-12-15 Mark AbrahamMake OpenCL implementation of gpu_utils tests conform
2017-12-14 Mark AbrahamAvoid confusing message at end of non-dynamical runs
2017-12-14 Mark AbrahamFix return values of frame-reading functions
2017-12-14 Berk HessRequire -ntmpi with setting -ntomp with GPUs
2017-12-14 Mark AbrahamMake AVX-512 CMake detction work
2017-12-14 Paul BauerRemove PBC before generating TPR with group scheme
2017-12-14 Roland SchulzSimplify CMAP loop
2017-12-14 Erik LindahlWork around AVX-512 issues in gcc-5.4 and 7.1
2017-12-14 Erik LindahlFix PBC error in gmx_spatial
2017-12-14 Mark AbrahamMerge "Merge branch release-2016 into release-2018...
2017-12-13 Roland SchulzRemove int support for SimdArrayRef
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