BioD PNPI Git Repos - alexxy/gromacs.git/shortlog

biod.pnpi.spb.ru / alexxy / gromacs.git / shortlog

2012-11-12	David van der...	Fixes #1020 options in g_enemat	commit \| commitdiff \| tree \| snapshot
2012-11-11	Roland Schulz	Fix FMA4 compile for GCC and MSVC	commit \| commitdiff \| tree \| snapshot
2012-11-10	Roland Schulz	Merge "Fix broken manual formatting" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-10	Mark Abraham	Fix broken manual formatting	commit \| commitdiff \| tree \| snapshot
2012-11-10	Teemu Murtola	Remove obsolete GMX_THREAD_SHM_FDECOMP.	commit \| commitdiff \| tree \| snapshot
2012-11-09	Roland Schulz	Fix component for libcudart	commit \| commitdiff \| tree \| snapshot
2012-11-09	Erik Lindahl	Removed old (now unused) bluegene kernels.	commit \| commitdiff \| tree \| snapshot
2012-11-09	Erik Lindahl	Removed unused old kernel generator	commit \| commitdiff \| tree \| snapshot
2012-11-09	Erik Lindahl	Removal of stale Fortran/Power6 kernels	commit \| commitdiff \| tree \| snapshot
2012-11-09	Erik Lindahl	Removal of stale Fortran kernels	commit \| commitdiff \| tree \| snapshot
2012-11-09	Kasson	Merge "only use CPU_COUNT if it's available" into relea...	commit \| commitdiff \| tree \| snapshot
2012-11-09	Szilard Pall	only use CPU_COUNT if it's available	commit \| commitdiff \| tree \| snapshot
2012-11-09	Szilard Pall	also preferentiate .lib with GMX_PREFER_STATIC_LIBS	commit \| commitdiff \| tree \| snapshot
2012-11-08	Roland Schulz	Merge "Fixed bug in the new switch-modified interaction...	commit \| commitdiff \| tree \| snapshot
2012-11-08	Christoph Junghans	Merge "auto-set nvcc host compiler with FindMPI detecti...	commit \| commitdiff \| tree \| snapshot
2012-11-08	Christoph Junghans	Merge "Relocated logic of simple-vs-GPU Ewald table...	commit \| commitdiff \| tree \| snapshot
2012-11-08	Erik Lindahl	Fixed bug in the new switch-modified interactions in...	commit \| commitdiff \| tree \| snapshot
2012-11-08	Erik Lindahl	Allow rcoulomb=rlistlong for PME with nstcalclr=1	commit \| commitdiff \| tree \| snapshot
2012-11-08	Mark Abraham	Relocated logic of simple-vs-GPU Ewald table generation	commit \| commitdiff \| tree \| snapshot
2012-11-08	Erik Lindahl	Infrastructure for new group kernels, and new C kernels	commit \| commitdiff \| tree \| snapshot
2012-11-07	Christoph Junghans	Obey DSO standard	commit \| commitdiff \| tree \| snapshot
2012-11-07	Szilard Pall	auto-set nvcc host compiler with FindMPI detection	commit \| commitdiff \| tree \| snapshot
2012-11-07	Szilard Pall	detect externally set CPU affinity	commit \| commitdiff \| tree \| snapshot
2012-11-06	Roland Schulz	Fix cmake error if compiler starts with blank line	commit \| commitdiff \| tree \| snapshot
2012-11-06	Roland Schulz	Merge "Clarification of mdp_opt, add nstexpand defaults...	commit \| commitdiff \| tree \| snapshot
2012-11-06	Berk Hess	Merge "Add option to install libcudart" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-06	Michael Shirts	Clarification of mdp_opt, add nstexpand defaults &...	commit \| commitdiff \| tree \| snapshot
2012-11-06	Berk Hess	Merge "don't execute any mpi_info/mpiname in the path...	commit \| commitdiff \| tree \| snapshot
2012-11-05	Berk Hess	Merge "updated several things related with OpenMP threa...	commit \| commitdiff \| tree \| snapshot
2012-11-05	Roland Schulz	Add option to install libcudart	commit \| commitdiff \| tree \| snapshot
2012-11-05	Berk Hess	updated several things related with OpenMP thread count	commit \| commitdiff \| tree \| snapshot
2012-11-03	Roland Schulz	Merge release-4-5-patches into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-03	Christoph Junghans	Reworked version of cmake FFTW detection	commit \| commitdiff \| tree \| snapshot
2012-11-02	Roland Schulz	Merge all License/COPYING files into one and install it	commit \| commitdiff \| tree \| snapshot
2012-11-02	Szilard Pall	don't execute any mpi_info/mpiname in the path	commit \| commitdiff \| tree \| snapshot
2012-11-01	Roland Schulz	Fix DEB/RPM cpack generation	commit \| commitdiff \| tree \| snapshot
2012-11-01	Christoph Junghans	Actually disable GPU when compiling in double	commit \| commitdiff \| tree \| snapshot
2012-10-31	Szilard Pall	fix internal/external OpenMP thread affinity clash	commit \| commitdiff \| tree \| snapshot
2012-10-30	Roland Schulz	Fix that no OpenMP flags are used with GMX_OPENMP=no	commit \| commitdiff \| tree \| snapshot
2012-10-27	Roland Schulz	Set HAVE_FSEEKO consistently in one place	commit \| commitdiff \| tree \| snapshot
2012-10-27	Christoph Junghans	Merge "Fix large file support" into release-4-5-patches	commit \| commitdiff \| tree \| snapshot
2012-10-26	Roland Schulz	Fix usage of CMAKE_REQUIRED_*	commit \| commitdiff \| tree \| snapshot
2012-10-26	Roland Schulz	Merge "fixed incorrect PME load balancing limitation...	commit \| commitdiff \| tree \| snapshot
2012-10-26	Christoph Junghans	Merge "enable GMX_PREFER_STATIC_LIBS CMake option on...	commit \| commitdiff \| tree \| snapshot
2012-10-26	Christoph Junghans	Merge "fix false positive gcc 4.7 warning in libxdrf...	commit \| commitdiff \| tree \| snapshot
2012-10-26	David van der...	Merge "Fixed Pulp Fiction quote" into release-4-5-patches	commit \| commitdiff \| tree \| snapshot
2012-10-26	Berk Hess	fixed incorrect PME load balancing limitation	commit \| commitdiff \| tree \| snapshot
2012-10-26	Roland Schulz	Merge "set the default for nstdhdl to 100" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-10-26	Berk Hess	set the default for nstdhdl to 100	commit \| commitdiff \| tree \| snapshot
2012-10-26	Berk Hess	fixed incorrect group energies with nbnxn CPU kernels	commit \| commitdiff \| tree \| snapshot
2012-10-25	Roland Schulz	Merge "fix CUDA non-bonded kernel pointer assignment...	commit \| commitdiff \| tree \| snapshot
2012-10-25	Szilárd Páll	fix false positive gcc 4.7 warning in libxdrf	commit \| commitdiff \| tree \| snapshot
2012-10-24	Szilárd Páll	enable GMX_PREFER_STATIC_LIBS CMake option on Mac OS X	commit \| commitdiff \| tree \| snapshot
2012-10-23	Berk Hess	fixed bondfree.c thread safety with free energy	commit \| commitdiff \| tree \| snapshot
2012-10-23	Roland Schulz	Merge "moved part of nbnxn_search.c to nbnxn_atomdata...	commit \| commitdiff \| tree \| snapshot
2012-10-23	Roland Schulz	Merge "fixed incorrect LJ energy with GPU and PME load...	commit \| commitdiff \| tree \| snapshot
2012-10-23	Berk Hess	moved part of nbnxn_search.c to nbnxn_atomdata.c	commit \| commitdiff \| tree \| snapshot
2012-10-23	Roland Schulz	Replace sprintf with snprintf to make safe	commit \| commitdiff \| tree \| snapshot
2012-10-23	Berk Hess	fixed incorrect LJ energy with GPU and PME load balancing	commit \| commitdiff \| tree \| snapshot
2012-10-23	Roland Schulz	Merge "added OpenMP parallelization for virtual sites...	commit \| commitdiff \| tree \| snapshot
2012-10-22	Berk Hess	added OpenMP parallelization for virtual sites	commit \| commitdiff \| tree \| snapshot
2012-10-22	Szilard Pall	fix CUDA non-bonded kernel pointer assignment	commit \| commitdiff \| tree \| snapshot
2012-10-22	Roland Schulz	Fix minor OpenMP issue for md-vv update	commit \| commitdiff \| tree \| snapshot
2012-10-22	Roland Schulz	Fix clang 3.2 unintialized variable warnings	commit \| commitdiff \| tree \| snapshot
2012-10-21	David van der...	Fixed Bug #593 about memory hole in trjcat.	commit \| commitdiff \| tree \| snapshot
2012-10-19	Roland Schulz	Merge "[tools] Allow g_dist to use default index group...	commit \| commitdiff \| tree \| snapshot
2012-10-19	Kasson	Merge "renamed constraint variables rmdr to vir_r_m_dr...	commit \| commitdiff \| tree \| snapshot
2012-10-19	Roland Schulz	Fix large file support	commit \| commitdiff \| tree \| snapshot
2012-10-19	Roland Schulz	Merge "renamed pme_switch... to pme_loadbal..." into...	commit \| commitdiff \| tree \| snapshot
2012-10-18	Roland Schulz	Merge "Added thread affinity API to thread_mpi." into...	commit \| commitdiff \| tree \| snapshot
2012-10-18	Berk Hess	renamed constraint variables rmdr to vir_r_m_dr	commit \| commitdiff \| tree \| snapshot
2012-10-18	Berk Hess	added OpenMP parallelization to LINCS projection	commit \| commitdiff \| tree \| snapshot
2012-10-18	Alexey Shvetsov	[tools] Allow g_dist to use default index group	commit \| commitdiff \| tree \| snapshot
2012-10-17	Roland Schulz	Fixed Pulp Fiction quote	commit \| commitdiff \| tree \| snapshot
2012-10-17	Berk Hess	renamed pme_switch... to pme_loadbal...	commit \| commitdiff \| tree \| snapshot
2012-10-17	Kasson	Merge "Make Gromacs compile without C++ compiler" into...	commit \| commitdiff \| tree \| snapshot
2012-10-16	Roland Schulz	Merge "made pair-search with GPU 20% faster" into relea...	commit \| commitdiff \| tree \| snapshot
2012-10-16	Carsten Kutzner	Made g_tune_pme read (ns/day) from 4.6 md.log output...	commit \| commitdiff \| tree \| snapshot
2012-10-16	Carsten Kutzner	Removed obsolete hint in error message.	commit \| commitdiff \| tree \| snapshot
2012-10-16	Berk Hess	made pair-search with GPU 20% faster	commit \| commitdiff \| tree \| snapshot
2012-10-15	Sander Pronk	Added thread affinity API to thread_mpi.	commit \| commitdiff \| tree \| snapshot
2012-10-13	David van der...	Merge "Fixing issues with replica exchange" into releas...	commit \| commitdiff \| tree \| snapshot
2012-10-13	Mark Abraham	Fixed install-xxx functionality broken in 9628e27d	commit \| commitdiff \| tree \| snapshot
2012-10-12	Berk Hess	Merge "Fix illegal barrier in worksharing" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-10-12	Roland Schulz	Fix illegal barrier in worksharing	commit \| commitdiff \| tree \| snapshot
2012-10-12	Michael Shirts	Fixing issues with replica exchange	commit \| commitdiff \| tree \| snapshot
2012-10-10	Christoph Junghans	fixed header for 3rd party apps	commit \| commitdiff \| tree \| snapshot
2012-10-10	Roland Schulz	Make Gromacs compile without C++ compiler	commit \| commitdiff \| tree \| snapshot
2012-10-08	Berk Hess	made non-bonded potential shifts mdp options	commit \| commitdiff \| tree \| snapshot
2012-10-06	Roland Schulz	Fix incorrect free	commit \| commitdiff \| tree \| snapshot
2012-10-04	David van der...	Set return value to FALSE (0) in estimate_dt in libxdrf.c	commit \| commitdiff \| tree \| snapshot
2012-10-04	Berk Hess	fixed backward compatibility of tpr files with dihres	commit \| commitdiff \| tree \| snapshot
2012-10-03	Sander Pronk	Added two #defines that state the gromacs API + program...	commit \| commitdiff \| tree \| snapshot
2012-10-03	Berk Hess	improved the energy conservation with SETTLE	commit \| commitdiff \| tree \| snapshot
2012-10-02	Szilard Pall	added Verlet scheme and NxN non-bonded functionality	commit \| commitdiff \| tree \| snapshot
2012-10-01	Roland Schulz	Merge release-4-5-patches into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-09-30	Roland Schulz	Fix problems found by cppcheck 1.56	commit \| commitdiff \| tree \| snapshot
2012-09-27	Christoph Junghans	Merge "Fixed an off-by-one error in atom counting in...	commit \| commitdiff \| tree \| snapshot
2012-09-27	Teemu Murtola	Merge "Fix insolidangle selections near poles." into...	commit \| commitdiff \| tree \| snapshot
2012-09-27	Sander Pronk	Fixed an off-by-one error in atom counting in gmx_dist.	commit \| commitdiff \| tree \| snapshot
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