BioD PNPI Git Repos - alexxy/gromacs.git/shortlog

biod.pnpi.spb.ru / alexxy / gromacs.git / shortlog

2012-11-29	Szilard Pall	fix cmake re-running failure introduced by ef1127f	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Initial commit of new install guide" into releas...	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Bump version to 4.6-beta1" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Initial commit of new install guide	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Bump version to 4.6-beta1	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Added .gitignore for kernel generation" into...	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Double precision AVX-256 kernels" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Added .gitignore for kernel generation	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Fixing issue with GPU detection reporting" into...	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Double precision AVX_128_FMA kernels" into relea...	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Fix: pthread variables were overwritten by gmxMa...	commit \| commitdiff \| tree \| snapshot
2012-11-29	Erik Lindahl	Double precision AVX-256 kernels	commit \| commitdiff \| tree \| snapshot
2012-11-29	Erik Lindahl	Double precision AVX_128_FMA kernels	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Fixing issue with GPU detection reporting	commit \| commitdiff \| tree \| snapshot
2012-11-29	Christoph Junghans	Merge "Print error if no thread support is available...	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Refuse to build with clang 3.0	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Add a CMake warning about FFTW with --enable-avx	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "automation for setting GMX_GPU & cmake GPU detec...	commit \| commitdiff \| tree \| snapshot
2012-11-29	Szilard Pall	automation for setting GMX_GPU & cmake GPU detection	commit \| commitdiff \| tree \| snapshot
2012-11-29	Szilard Pall	don't print nonbonded kernel info with GMX_NO_NONBONDED	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "SSE4.1 double precision kernels" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-29	Mark Abraham	Merge "Double precision SSE2 kernels" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-28	Mark Abraham	Merge "Ported back some AVX256 optimizations to SSE2...	commit \| commitdiff \| tree \| snapshot
2012-11-28	Erik Lindahl	SSE4.1 double precision kernels	commit \| commitdiff \| tree \| snapshot
2012-11-28	Erik Lindahl	Double precision SSE2 kernels	commit \| commitdiff \| tree \| snapshot
2012-11-28	Erik Lindahl	Ported back some AVX256 optimizations to SSE2/SSE4...	commit \| commitdiff \| tree \| snapshot
2012-11-28	Berk Hess	fixed thread pinning with mdrun -multi	commit \| commitdiff \| tree \| snapshot
2012-11-28	Mark Abraham	Merge "Fix Window-GPU build" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-28	Christoph Junghans	Merge "Fix cpack src ignore rule" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-28	Roland Schulz	Merge "Remove CVS files" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-28	Roland Schulz	Fix cpack src ignore rule	commit \| commitdiff \| tree \| snapshot
2012-11-28	Erik Lindahl	128-bit AVX kernels, with FMA instructions for Opteron...	commit \| commitdiff \| tree \| snapshot
2012-11-28	Christoph Junghans	Add option to internally build FFTW if selected	commit \| commitdiff \| tree \| snapshot
2012-11-28	Roland Schulz	Fix: pthread variables were overwritten by gmxManageGPU	commit \| commitdiff \| tree \| snapshot
2012-11-28	Mark Abraham	Merge "extended nbnxn x86 SIMD kernel blendv support...	commit \| commitdiff \| tree \| snapshot
2012-11-28	Roland Schulz	Fix CPACK_SOURCE_IGNORE_FILES	commit \| commitdiff \| tree \| snapshot
2012-11-28	Szilárd Páll	Merge changes I9b865c4c,Ib709290e into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-28	Roland Schulz	Print error if no thread support is available	commit \| commitdiff \| tree \| snapshot
2012-11-28	Szilard Pall	enable GPU emulation without GPU support	commit \| commitdiff \| tree \| snapshot
2012-11-28	Berk Hess	extended nbnxn x86 SIMD kernel blendv support	commit \| commitdiff \| tree \| snapshot
2012-11-28	Szilard Pall	use tMPI API for thread affinity setting	commit \| commitdiff \| tree \| snapshot
2012-11-28	Sander Pronk	Fixed Windows tMPI_Thread_self().	commit \| commitdiff \| tree \| snapshot
2012-11-27	Roland Schulz	Fix Window-GPU build	commit \| commitdiff \| tree \| snapshot
2012-11-27	Roland Schulz	Remove CVS files	commit \| commitdiff \| tree \| snapshot
2012-11-27	Erik Lindahl	Nonbonded group kernels for 256-bit AVX (Intel CPUs)	commit \| commitdiff \| tree \| snapshot
2012-11-27	Michael Shirts	Removes memory allocation from free energy foreign...	commit \| commitdiff \| tree \| snapshot
2012-11-27	Roland Schulz	Add visibility defines	commit \| commitdiff \| tree \| snapshot
2012-11-27	Erik Lindahl	Merge "Added affinity support check, visibility macros...	commit \| commitdiff \| tree \| snapshot
2012-11-27	Erik Lindahl	Merge "fixed bug in nbnxn OpenMP non-bonded force reduc...	commit \| commitdiff \| tree \| snapshot
2012-11-27	David van der...	Merge "Merge release-4-5-patches into release-4-6"...	commit \| commitdiff \| tree \| snapshot
2012-11-27	Berk Hess	fixed bug in nbnxn OpenMP non-bonded force reduction	commit \| commitdiff \| tree \| snapshot
2012-11-27	Sander Pronk	Added affinity support check, visibility macros in...	commit \| commitdiff \| tree \| snapshot
2012-11-26	Sander Pronk	Fixed issues with g_bar help text.	commit \| commitdiff \| tree \| snapshot
2012-11-26	Roland Schulz	Merge release-4-5-patches into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-26	Roland Schulz	Merge "Clean up some mathematical constants" into relea...	commit \| commitdiff \| tree \| snapshot
2012-11-26	Erik Lindahl	Merge "Use stat for gmx_is_file. Fix get_libdir with...	commit \| commitdiff \| tree \| snapshot
2012-11-26	Berk Hess	made nbnxn analytical Ewald consistent	commit \| commitdiff \| tree \| snapshot
2012-11-26	Mark Abraham	Clean up some mathematical constants	commit \| commitdiff \| tree \| snapshot
2012-11-26	Sander Pronk	Made the linear extrapolation in g_bar non-default...	commit \| commitdiff \| tree \| snapshot
2012-11-26	Erik Lindahl	Merge "Extended build information output and reference...	commit \| commitdiff \| tree \| snapshot
2012-11-26	David van der...	Fixes #1035 NaN in g_cluster output.	commit \| commitdiff \| tree \| snapshot
2012-11-26	Berk Hess	added nbnxn analytical Ewald correction kernels	commit \| commitdiff \| tree \| snapshot
2012-11-25	Teemu Murtola	Extended build information output and reference build...	commit \| commitdiff \| tree \| snapshot
2012-11-24	Roland Schulz	Use stat for gmx_is_file. Fix get_libdir with symlinks.	commit \| commitdiff \| tree \| snapshot
2012-11-23	Roland Schulz	Merge "removed group non-boneded call with verlet schem...	commit \| commitdiff \| tree \| snapshot
2012-11-23	Roland Schulz	Merge "improve FindGROMACS.cmake" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-23	Roland Schulz	Force C++ linking of the gpu_utils	commit \| commitdiff \| tree \| snapshot
2012-11-23	Szilárd Páll	Merge "Updates to CMake treatment of OpenMP" into relea...	commit \| commitdiff \| tree \| snapshot
2012-11-23	Szilard Pall	removed group non-boneded call with verlet scheme	commit \| commitdiff \| tree \| snapshot
2012-11-23	Mark Abraham	Updates to CMake treatment of OpenMP	commit \| commitdiff \| tree \| snapshot
2012-11-23	Roland Schulz	Merge changes I88f0dcef,I86b2a8cf,I70fb7e6d into releas...	commit \| commitdiff \| tree \| snapshot
2012-11-22	Erik Lindahl	Fix for icc 13 optimization-related issue and TIP4P...	commit \| commitdiff \| tree \| snapshot
2012-11-22	Christoph Junghans	improve FindGROMACS.cmake	commit \| commitdiff \| tree \| snapshot
2012-11-22	Erik Lindahl	Implemented RMS-based force tolerance in gmxcheck	commit \| commitdiff \| tree \| snapshot
2012-11-22	Erik Lindahl	Fixed LJ-14 error in free energy	commit \| commitdiff \| tree \| snapshot
2012-11-22	Mark Abraham	Speed up mdlib compilation by reordering file globs	commit \| commitdiff \| tree \| snapshot
2012-11-22	Szilard Pall	unset MPI detection leftover cache variables	commit \| commitdiff \| tree \| snapshot
2012-11-20	Christoph Junghans	Merge "Fix g_msd -mol" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-20	Christoph Junghans	Merge "Fixes bug in g_hbond that makes it produce fatal...	commit \| commitdiff \| tree \| snapshot
2012-11-20	David van der...	Fixes bug in g_hbond that makes it produce fatal error.	commit \| commitdiff \| tree \| snapshot
2012-11-20	Roland Schulz	Fix CXX/C mismatch of flag/macro for gmxCFlags	commit \| commitdiff \| tree \| snapshot
2012-11-20	Roland Schulz	Merge release-4-5-patches into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-20	Roland Schulz	Fix CXX/C mismatch of flag/macro for gmxCFlags	commit \| commitdiff \| tree \| snapshot
2012-11-19	Roland Schulz	Merge changes Ibc555d88,Iaf6f3051 into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-19	Mark Abraham	Merge "SSE4.1 single-precision kernels" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-19	Mark Abraham	Minor updates to CMake usage	commit \| commitdiff \| tree \| snapshot
2012-11-19	Roland Schulz	Add CMAKE_PREFIX_PATH to cmake-gui	commit \| commitdiff \| tree \| snapshot
2012-11-19	Erik Lindahl	SSE4.1 single-precision kernels	commit \| commitdiff \| tree \| snapshot
2012-11-19	Roland Schulz	Merge "Remove double declaration in headers" into relea...	commit \| commitdiff \| tree \| snapshot
2012-11-19	Szilard Pall	always mark as advanced leftover FindCUDA variables	commit \| commitdiff \| tree \| snapshot
2012-11-18	Roland Schulz	Fix GMX_TEST_CFLAG bug with acceleration flags	commit \| commitdiff \| tree \| snapshot
2012-11-18	Roland Schulz	Fix bugs in gmxCFlags	commit \| commitdiff \| tree \| snapshot
2012-11-17	Roland Schulz	Rename remaining GMX_ACCELERATION to GMX_CPU_ACCELERATION	commit \| commitdiff \| tree \| snapshot
2012-11-17	Roland Schulz	Remove double declaration in headers	commit \| commitdiff \| tree \| snapshot
2012-11-17	David van der...	Merge "Added grompp warning" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-17	David van der...	Merge "Remove rest of the xml support" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-11-17	Roland Schulz	Merge "Removing Zn and Ar non-OPLS atom types" into...	commit \| commitdiff \| tree \| snapshot
2012-11-16	Mark Abraham	Added grompp warning	commit \| commitdiff \| tree \| snapshot
2012-11-16	Roland Schulz	Removing Zn and Ar non-OPLS atom types	commit \| commitdiff \| tree \| snapshot
2012-11-16	Christoph Junghans	Remove rest of the xml support	commit \| commitdiff \| tree \| snapshot
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