BioD PNPI Git Repos - alexxy/gromacs.git/shortlog

biod.pnpi.spb.ru / alexxy / gromacs.git / shortlog

2012-07-24	Teemu Murtola	Merge remote-tracking branch 'gerrit/release-4-6'	commit \| commitdiff \| tree \| snapshot
2012-07-24	Mark Abraham	Clean up of environment variables	commit \| commitdiff \| tree \| snapshot
2012-07-16	Christoph Junghans	Merge "Removed commas from gmx_hbond OpenMP constructs...	commit \| commitdiff \| tree \| snapshot
2012-07-16	Christoph Junghans	Merge "Enforced rotation: PBC/restart fix" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-07-15	Roland Schulz	Take first description if programs.txt has more than...	commit \| commitdiff \| tree \| snapshot
2012-07-15	David van der...	Merge "Autogenerate gromacs.7 from programs.txt" into...	commit \| commitdiff \| tree \| snapshot
2012-07-15	Roland Schulz	Adding missing entries in programs.txt	commit \| commitdiff \| tree \| snapshot
2012-07-15	Teemu Murtola	Removed commas from gmx_hbond OpenMP constructs.	commit \| commitdiff \| tree \| snapshot
2012-07-13	Roland Schulz	Merge release-4.5-patches into HEAD	commit \| commitdiff \| tree \| snapshot
2012-07-12	Jochen Hub	Flat-bottomed position restraints	commit \| commitdiff \| tree \| snapshot
2012-07-10	Jochen Hub	Extended g_wham to allow the selection of the pull...	commit \| commitdiff \| tree \| snapshot
2012-07-10	Roland Schulz	Adding missing entries in programs.txt	commit \| commitdiff \| tree \| snapshot
2012-07-10	Roland Schulz	Use relative rpath to support relocatable binary packages	commit \| commitdiff \| tree \| snapshot
2012-07-10	Roland Schulz	Merge remote-tracking branch 'origin/release-4-6' into...	commit \| commitdiff \| tree \| snapshot
2012-07-10	Roland Schulz	Allow usage of relative install paths	commit \| commitdiff \| tree \| snapshot
2012-07-09	Christoph Junghans	Merge "Fixed bug in sfactor.c that makes g_rdf -sq...	commit \| commitdiff \| tree \| snapshot
2012-07-09	Jochen Hub	Fixed bug in sfactor.c that makes g_rdf -sq give wrong...	commit \| commitdiff \| tree \| snapshot
2012-07-09	Teemu Murtola	Fix memory error with complex boolean selections.	commit \| commitdiff \| tree \| snapshot
2012-07-08	Teemu Murtola	Extension completion for FileNameOption.	commit \| commitdiff \| tree \| snapshot
2012-07-07	Roland Schulz	Autogenerate gromacs.7 from programs.txt	commit \| commitdiff \| tree \| snapshot
2012-07-06	Carsten Kutzner	Enforced rotation: PBC/restart fix	commit \| commitdiff \| tree \| snapshot
2012-07-06	Teemu Murtola	Better invalid option value handling.	commit \| commitdiff \| tree \| snapshot
2012-07-06	Roland Schulz	Merge "Remove remaining underscore-prefixed C++ symbols."	commit \| commitdiff \| tree \| snapshot
2012-07-06	Roland Schulz	Merge "Set common output directory for binaries"	commit \| commitdiff \| tree \| snapshot
2012-07-06	Teemu Murtola	Remove remaining underscore-prefixed C++ symbols.	commit \| commitdiff \| tree \| snapshot
2012-07-06	Erik Marklund	Bugfix for the segfault that occurs with g_hbond -hbm...	commit \| commitdiff \| tree \| snapshot
2012-07-06	Teemu Murtola	Merge "Test framework for TrajectoryAnalysisModules."	commit \| commitdiff \| tree \| snapshot
2012-07-06	Teemu Murtola	Test framework for TrajectoryAnalysisModules.	commit \| commitdiff \| tree \| snapshot
2012-07-06	Roland Schulz	Adding FFT Unit Tests	commit \| commitdiff \| tree \| snapshot
2012-07-06	Roland Schulz	Don't prevent GMX_PREFER_STATIC_LIBS with BUILD_SHARED_LIBS	commit \| commitdiff \| tree \| snapshot
2012-07-06	Roland Schulz	Set common output directory for binaries	commit \| commitdiff \| tree \| snapshot
2012-07-05	Christoph Junghans	Merge "Extract doxygen documentation for static symbols."	commit \| commitdiff \| tree \| snapshot
2012-07-05	Roland Schulz	Build man-pages instead of distributing them in the...	commit \| commitdiff \| tree \| snapshot
2012-07-05	David van der...	Merge "Improve ProgramInfo and use it everywhere."	commit \| commitdiff \| tree \| snapshot
2012-07-05	Teemu Murtola	Extract doxygen documentation for static symbols.	commit \| commitdiff \| tree \| snapshot
2012-07-05	Christoph Junghans	Merge "Fix most doxygen warnings."	commit \| commitdiff \| tree \| snapshot
2012-07-05	Christoph Junghans	Merge "Don't rerun checks and be quiet 2nd time cmake...	commit \| commitdiff \| tree \| snapshot
2012-07-05	Christoph Junghans	Merge "Allow also FindMPI for cmake<2.8.5" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-07-05	Christoph Junghans	Merge "Finalized and extended Szilard's openMP cleanup...	commit \| commitdiff \| tree \| snapshot
2012-07-05	Roland Schulz	Don't rerun checks and be quiet 2nd time cmake is run	commit \| commitdiff \| tree \| snapshot
2012-07-04	Erik Marklund	Finalized and extended Szilard's openMP cleanup of...	commit \| commitdiff \| tree \| snapshot
2012-07-04	Roland Schulz	Merge "Add FindGROMACS.cmake to template's CMakeLists...	commit \| commitdiff \| tree \| snapshot
2012-07-04	Roland Schulz	Merge "Fixed bug in free energy calculation for Morse...	commit \| commitdiff \| tree \| snapshot
2012-07-04	Roland Schulz	Remove unused FFT functions	commit \| commitdiff \| tree \| snapshot
2012-07-04	Teemu Murtola	Fix most doxygen warnings.	commit \| commitdiff \| tree \| snapshot
2012-07-04	Roland Schulz	Fixes for FFT libraries	commit \| commitdiff \| tree \| snapshot
2012-07-04	Berk Hess	set default for rcoulomb, rvdw and rlist to -1	commit \| commitdiff \| tree \| snapshot
2012-07-03	Teemu Murtola	Improve ProgramInfo and use it everywhere.	commit \| commitdiff \| tree \| snapshot
2012-07-03	Teemu Murtola	Error/exception handling improvements.	commit \| commitdiff \| tree \| snapshot
2012-07-03	Teemu Murtola	Always build thread_mpi threading into libgromacs.	commit \| commitdiff \| tree \| snapshot
2012-07-03	Elton Carvalho	Fixed L-BFGS trajectory output.	commit \| commitdiff \| tree \| snapshot
2012-07-03	Szilárd Páll	Merge "Minor formatting and consistency changes to...	commit \| commitdiff \| tree \| snapshot
2012-07-02	Christoph Junghans	Do not print disabled pressures and virials	commit \| commitdiff \| tree \| snapshot
2012-06-30	David van der...	Fixed bug in free energy calculation for Morse potentials	commit \| commitdiff \| tree \| snapshot
2012-06-29	Christoph Junghans	Add FindGROMACS.cmake to template's CMakeLists.txt	commit \| commitdiff \| tree \| snapshot
2012-06-29	Michael Shirts	Minor formatting and consistency changes to txtdump.c	commit \| commitdiff \| tree \| snapshot
2012-06-29	Michael Shirts	Corrected checkpoint version issues with free energy...	commit \| commitdiff \| tree \| snapshot
2012-06-29	Sebastian Fritsch	Merge "Fixed adress kernel for double precision" into...	commit \| commitdiff \| tree \| snapshot
2012-06-28	Christoph Junghans	Fixed adress kernel for double precision	commit \| commitdiff \| tree \| snapshot
2012-06-28	Roland Schulz	Allow also FindMPI for cmake<2.8.5	commit \| commitdiff \| tree \| snapshot
2012-06-28	Christoph Junghans	Merge "Fix MPI build for MPI library without mpi wrappe...	commit \| commitdiff \| tree \| snapshot
2012-06-28	Teemu Murtola	Remove more underscore-prefixed C++ symbols.	commit \| commitdiff \| tree \| snapshot
2012-06-28	Roland Schulz	Fix MPI build for MPI library without mpi wrapper	commit \| commitdiff \| tree \| snapshot
2012-06-27	Szilard Pall	fixes typo gmx_omp introduced by 697bcdc	commit \| commitdiff \| tree \| snapshot
2012-06-27	Christoph Junghans	Merge "Make C++11 test quiet after the first cmake...	commit \| commitdiff \| tree \| snapshot
2012-06-27	Christoph Junghans	Merge "Use VERSION_LESS in the version detection code."	commit \| commitdiff \| tree \| snapshot
2012-06-27	Teemu Murtola	Use VERSION_LESS in the version detection code.	commit \| commitdiff \| tree \| snapshot
2012-06-27	Roland Schulz	Fix for boost version check added by 6b4c9bc	commit \| commitdiff \| tree \| snapshot
2012-06-26	Teemu Murtola	Update CPack package version.	commit \| commitdiff \| tree \| snapshot
2012-06-26	Teemu Murtola	Make C++11 test quiet after the first cmake run.	commit \| commitdiff \| tree \| snapshot
2012-06-26	Roland Schulz	Merge "Make sure that found Boost version is new enough"	commit \| commitdiff \| tree \| snapshot
2012-06-26	Roland Schulz	Fix that rerunning cmake gives the same result as 1st run	commit \| commitdiff \| tree \| snapshot
2012-06-26	Teemu Murtola	Merge "Merge remote-tracking branch 'origin/release...	commit \| commitdiff \| tree \| snapshot
2012-06-26	Roland Schulz	Make sure that found Boost version is new enough	commit \| commitdiff \| tree \| snapshot
2012-06-26	Roland Schulz	Merge "Fix gmx_fatal for serial compilation" into relea...	commit \| commitdiff \| tree \| snapshot
2012-06-26	Christoph Junghans	Merge "Merge remote-tracking branch 'gerrit/release...	commit \| commitdiff \| tree \| snapshot
2012-06-25	Szilard Pall	introduce gmx_omp wrapper for the OpenMP API	commit \| commitdiff \| tree \| snapshot
2012-06-25	Berk Hess	fixed segv/hang with EM and foreign lambda values	commit \| commitdiff \| tree \| snapshot
2012-06-25	Berk Hess	added check for log fp!=NULL when disabling acceleration	commit \| commitdiff \| tree \| snapshot
2012-06-24	Christoph Junghans	Merge "Remove MPI define for FAH" into release-4-6	commit \| commitdiff \| tree \| snapshot
2012-06-24	Roland Schulz	Merge remote-tracking branch 'origin/release-4-6'	commit \| commitdiff \| tree \| snapshot
2012-06-24	Michael Shirts	Merge "Fix mdp_opt formatting of expanded ensemble...	commit \| commitdiff \| tree \| snapshot
2012-06-24	Teemu Murtola	Merge remote-tracking branch 'gerrit/release-4-6'	commit \| commitdiff \| tree \| snapshot
2012-06-24	Roland Schulz	Fix mdp_opt formatting of expanded ensemble	commit \| commitdiff \| tree \| snapshot
2012-06-24	Roland Schulz	Remove MPI define for FAH	commit \| commitdiff \| tree \| snapshot
2012-06-23	Roland Schulz	Fix illegal usage of MPI_Comm_create	commit \| commitdiff \| tree \| snapshot
2012-06-22	Christoph Junghans	Merge "Simple patch for openmm_wrapper.cpp" into releas...	commit \| commitdiff \| tree \| snapshot
2012-06-22	Teemu Murtola	Increase coverate of selection unit tests.	commit \| commitdiff \| tree \| snapshot
2012-06-21	Erik Lindahl	Fixed gcc inline assembly issue with PIC and older...	commit \| commitdiff \| tree \| snapshot
2012-06-21	David van der...	Fixes #961 - Shake reports wrong error	commit \| commitdiff \| tree \| snapshot
2012-06-20	Teemu Murtola	Make the selection parser exception-proof.	commit \| commitdiff \| tree \| snapshot
2012-06-20	Teemu Murtola	Use push parser for selection parsing.	commit \| commitdiff \| tree \| snapshot
2012-06-20	Teemu Murtola	Add string utility functions for suffix handling.	commit \| commitdiff \| tree \| snapshot
2012-06-20	Teemu Murtola	Rename format.h to more generic stringutil.h.	commit \| commitdiff \| tree \| snapshot
2012-06-20	Teemu Murtola	Clean up option and selection flags.	commit \| commitdiff \| tree \| snapshot
2012-06-20	Teemu Murtola	Remove (part of) underscore-prefixed C++ symbols.	commit \| commitdiff \| tree \| snapshot
2012-06-20	Roland Schulz	Fix gmx_fatal for serial compilation	commit \| commitdiff \| tree \| snapshot
2012-06-20	Erik Marklund	Correct normalization for HB-contact c-correlation.	commit \| commitdiff \| tree \| snapshot
2012-06-19	Mark Abraham	Merge "Fixes #882 - looping bug in trxio.c" into relea...	commit \| commitdiff \| tree \| snapshot
2012-06-19	Christoph Junghans	Merge "Quiet linker on BlueGene" into release-4-5-patches	commit \| commitdiff \| tree \| snapshot
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