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alexxy/gromacs.git
2012-11-19
Roland Schulz
Merge 'release-4-6' into master
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2012-11-17
Roland Schulz
Rename remaining GMX_ACCELERATION to GMX_CPU_ACCELERATION
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2012-11-17
David van der...
Merge "Added grompp warning" into release-4-6
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2012-11-17
David van der...
Merge "Remove rest of the xml support" into release-4-6
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2012-11-17
Roland Schulz
Merge "Removing Zn and Ar non-OPLS atom types" into...
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2012-11-16
Mark Abraham
Added grompp warning
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2012-11-16
Roland Schulz
Removing Zn and Ar non-OPLS atom types
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2012-11-16
Christoph Junghans
Remove rest of the xml support
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2012-11-16
David van der...
Merge "Removes unused files" into release-4-6
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2012-11-16
Erik Lindahl
SSE2 single-precision kernels
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2012-11-16
Roland Schulz
Removes unused files
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2012-11-16
Berk Hess
reduced the cost of the nbnxn OpenMP nb-force reduction
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2012-11-15
Christoph Junghans
Merge "Test that compiling and linking of AVX works...
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2012-11-15
Roland Schulz
Verify that FFTW can be used with shared libraries
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2012-11-15
Berk Hess
fixed incorrect 1-4 energies with OpenMP + energy groups
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2012-11-14
Roland Schulz
FindFFTW: Keep checking pkg_config until fftw is found
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2012-11-14
Berk Hess
fixed nbnxn x86 SIMD non-bonded performance regression
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2012-11-13
Erik Lindahl
Removed some unnecessary instructions, and fixed a...
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2012-11-12
Roland Schulz
Merge release-4-6 into master
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2012-11-12
Roland Schulz
Test that compiling and linking of AVX works
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2012-11-12
Roland Schulz
Allow to disable usage of rdtscp
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2012-11-12
Roland Schulz
Merge "Backport ThreadMPI.cmake version from master...
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2012-11-12
Roland Schulz
Merge "nbnxn CPU force buffer reduction now uses SIMD...
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2012-11-12
Roland Schulz
Backport ThreadMPI.cmake version from master
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2012-11-12
Berk Hess
nbnxn CPU force buffer reduction now uses SIMD
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2012-11-12
David van der...
Fixes #1020 options in g_enemat
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2012-11-12
Christoph Junghans
Merge "Option to create symlinks to g_ana."
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2012-11-12
Christoph Junghans
Merge "Always use relative install paths."
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2012-11-11
Roland Schulz
Fix FMA4 compile for GCC and MSVC
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2012-11-10
Roland Schulz
Merge release-4-6 into master
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2012-11-10
Roland Schulz
Merge "Fix broken manual formatting" into release-4-6
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2012-11-10
Teemu Murtola
Option to create symlinks to g_ana.
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2012-11-10
Mark Abraham
Fix broken manual formatting
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2012-11-10
Teemu Murtola
Always use relative install paths.
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2012-11-10
Teemu Murtola
Remove obsolete GMX_THREAD_SHM_FDECOMP.
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2012-11-09
Roland Schulz
Merge origin/release-4-6 into master
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2012-11-09
Roland Schulz
Fix component for libcudart
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2012-11-09
Erik Lindahl
Removed old (now unused) bluegene kernels.
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2012-11-09
Erik Lindahl
Removed unused old kernel generator
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2012-11-09
Erik Lindahl
Removal of stale Fortran/Power6 kernels
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2012-11-09
Erik Lindahl
Removal of stale Fortran kernels
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2012-11-09
Kasson
Merge "only use CPU_COUNT if it's available" into relea...
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2012-11-09
Szilard Pall
only use CPU_COUNT if it's available
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2012-11-09
Szilard Pall
also preferentiate .lib with GMX_PREFER_STATIC_LIBS
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2012-11-08
Roland Schulz
Merge "Fixed bug in the new switch-modified interaction...
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2012-11-08
Christoph Junghans
Merge "auto-set nvcc host compiler with FindMPI detecti...
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2012-11-08
Christoph Junghans
Merge "Relocated logic of simple-vs-GPU Ewald table...
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2012-11-08
Erik Lindahl
Fixed bug in the new switch-modified interactions in...
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2012-11-08
Teemu Murtola
Include Gromacs files with double quotes in C++ code.
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2012-11-08
Teemu Murtola
Remove unnecessary config.h includes in C++ code.
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2012-11-08
Erik Lindahl
Allow rcoulomb=rlistlong for PME with nstcalclr=1
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2012-11-08
Mark Abraham
Relocated logic of simple-vs-GPU Ewald table generation
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2012-11-08
Erik Lindahl
Infrastructure for new group kernels, and new C kernels
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2012-11-07
Christoph Junghans
Obey DSO standard
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2012-11-07
Szilard Pall
auto-set nvcc host compiler with FindMPI detection
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2012-11-07
Szilard Pall
detect externally set CPU affinity
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2012-11-06
Roland Schulz
Fix cmake error if compiler starts with blank line
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2012-11-06
Roland Schulz
Merge "Clarification of mdp_opt, add nstexpand defaults...
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2012-11-06
Berk Hess
Merge "Add option to install libcudart" into release-4-6
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2012-11-06
Michael Shirts
Clarification of mdp_opt, add nstexpand defaults &...
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2012-11-06
Berk Hess
Merge "don't execute any mpi_info/mpiname in the path...
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2012-11-05
Berk Hess
Merge "updated several things related with OpenMP threa...
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2012-11-05
Roland Schulz
Add option to install libcudart
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2012-11-05
Berk Hess
updated several things related with OpenMP thread count
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2012-11-03
Roland Schulz
Merge release-4-6 into master
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2012-11-03
Roland Schulz
Merge release-4-5-patches into release-4-6
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2012-11-03
Christoph Junghans
Reworked version of cmake FFTW detection
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2012-11-02
Roland Schulz
Merge all License/COPYING files into one and install it
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2012-11-02
Szilard Pall
don't execute any mpi_info/mpiname in the path
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2012-11-01
Roland Schulz
Fix DEB/RPM cpack generation
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2012-11-01
Christoph Junghans
Actually disable GPU when compiling in double
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2012-10-31
Szilard Pall
fix internal/external OpenMP thread affinity clash
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2012-10-30
Roland Schulz
Fix that no OpenMP flags are used with GMX_OPENMP=no
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2012-10-27
Roland Schulz
Set HAVE_FSEEKO consistently in one place
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2012-10-27
Teemu Murtola
Clean up git version generation.
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2012-10-27
Christoph Junghans
Merge "Fix large file support" into release-4-5-patches
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2012-10-26
Roland Schulz
Fix usage of CMAKE_REQUIRED_*
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2012-10-26
Roland Schulz
Merge "fixed incorrect PME load balancing limitation...
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2012-10-26
Christoph Junghans
Merge "enable GMX_PREFER_STATIC_LIBS CMake option on...
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2012-10-26
Christoph Junghans
Merge "fix false positive gcc 4.7 warning in libxdrf...
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2012-10-26
David van der...
Merge "Fixed Pulp Fiction quote" into release-4-5-patches
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2012-10-26
Berk Hess
fixed incorrect PME load balancing limitation
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2012-10-26
Roland Schulz
Merge "set the default for nstdhdl to 100" into release-4-6
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2012-10-26
Berk Hess
set the default for nstdhdl to 100
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2012-10-26
Berk Hess
fixed incorrect group energies with nbnxn CPU kernels
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2012-10-25
Roland Schulz
Merge "fix CUDA non-bonded kernel pointer assignment...
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2012-10-25
Roland Schulz
Merge remote-tracking branch 'origin/release-4-6' into...
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2012-10-25
Szilárd Páll
fix false positive gcc 4.7 warning in libxdrf
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2012-10-24
Szilárd Páll
enable GMX_PREFER_STATIC_LIBS CMake option on Mac OS X
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2012-10-23
Berk Hess
fixed bondfree.c thread safety with free energy
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2012-10-23
Roland Schulz
Merge "moved part of nbnxn_search.c to nbnxn_atomdata...
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2012-10-23
Roland Schulz
Merge "fixed incorrect LJ energy with GPU and PME load...
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2012-10-23
Berk Hess
moved part of nbnxn_search.c to nbnxn_atomdata.c
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2012-10-23
Roland Schulz
Replace sprintf with snprintf to make safe
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2012-10-23
Berk Hess
fixed incorrect LJ energy with GPU and PME load balancing
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2012-10-23
Roland Schulz
Merge "added OpenMP parallelization for virtual sites...
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2012-10-22
Berk Hess
added OpenMP parallelization for virtual sites
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2012-10-22
Szilard Pall
fix CUDA non-bonded kernel pointer assignment
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2012-10-22
Roland Schulz
Fix minor OpenMP issue for md-vv update
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2012-10-22
Roland Schulz
Fix clang 3.2 unintialized variable warnings
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