BioD PNPI Git Repos - alexxy/gromacs.git/shortlog

biod.pnpi.spb.ru / alexxy / gromacs.git / shortlog

2015-05-22	Teemu Murtola	Avoid crash with empty reference for 'same as' selection	commit \| commitdiff \| tree \| snapshot
2015-05-20	Teemu Murtola	Fix handling of real-valued 'to' selection ranges	commit \| commitdiff \| tree \| snapshot
2015-05-16	Mark Abraham	Suppress GCC5 warnings with internal Boost	commit \| commitdiff \| tree \| snapshot
2015-05-15	Szilard Pall	Assert the size of non-bonded GPU work units	commit \| commitdiff \| tree \| snapshot
2015-05-14	Mark Abraham	Fix own-FFTW build	commit \| commitdiff \| tree \| snapshot
2015-05-14	Szilard Pall	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2015-05-13	Berk Hess	Fixed CUDA error with empty domains	commit \| commitdiff \| tree \| snapshot
2015-05-13	Mark Abraham	Version bumps after new release	commit \| commitdiff \| tree \| snapshot
2015-05-13	Mark Abraham	Version 5.0.5	commit \| commitdiff \| tree \| snapshot
2015-05-13	Berk Hess	Fix segv in g_covar	commit \| commitdiff \| tree \| snapshot
2015-05-13	Szilard Pall	Fix auto-downloaded regression test execution	commit \| commitdiff \| tree \| snapshot
2015-05-13	Roland Schulz	Facilitate linking of static binaries	commit \| commitdiff \| tree \| snapshot
2015-05-12	Mark Abraham	Fix uninitialized fields in grompp t_state	commit \| commitdiff \| tree \| snapshot
2015-05-12	Rossen Apostolov	Added a note about sc-coul being auto turned on.	commit \| commitdiff \| tree \| snapshot
2015-05-11	Mark Abraham	Work around gcc 5 warnings with Google Test	commit \| commitdiff \| tree \| snapshot
2015-05-11	Berk Hess	Changed FFTW warning from AVX to no SSE	commit \| commitdiff \| tree \| snapshot
2015-05-06	Mark Abraham	Fixed recently-introduced couple-lambda warning message	commit \| commitdiff \| tree \| snapshot
2015-05-06	Szilárd Páll	Merge "Merge release-4-6 into release-5-0" into release-5-0	commit \| commitdiff \| tree \| snapshot
2015-05-06	Mark Abraham	Fix SIMD unit tests on BG/Q	commit \| commitdiff \| tree \| snapshot
2015-05-05	Mark Abraham	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2015-05-05	Teemu Murtola	Avoid rounding errors affecting results in one test	commit \| commitdiff \| tree \| snapshot
2015-05-05	Justin Lemkul	Fix for trjconv preserving box dimensions.	commit \| commitdiff \| tree \| snapshot
2015-05-04	Berk Hess	Fixed GPU non-local F copy local conditional	commit \| commitdiff \| tree \| snapshot
2015-04-30	Olivier Fisette	Fix error handling in gmx_tmpnam	commit \| commitdiff \| tree \| snapshot
2015-04-30	Michael Shirts	Fix for rarely occuring replica exchange error.	commit \| commitdiff \| tree \| snapshot
2015-04-28	Berk Hess	Re-enabled FMA for AVX-128-FMA	commit \| commitdiff \| tree \| snapshot
2015-04-17	Berk Hess	Correct -ntmpi auto for intel nehalem and older	commit \| commitdiff \| tree \| snapshot
2015-04-09	David van der...	Clarified comments for time-dependent electric fields.	commit \| commitdiff \| tree \| snapshot
2015-04-08	David van der...	Fixed incorrect output of gb_algorith as sa_algorithm.	commit \| commitdiff \| tree \| snapshot
2015-04-01	Berk Hess	Corrected force-switch manual section	commit \| commitdiff \| tree \| snapshot
2015-03-19	Mark Abraham	Made error message more generic	commit \| commitdiff \| tree \| snapshot
2015-03-17	Roland Schulz	Fix linking with static libxml2	commit \| commitdiff \| tree \| snapshot
2015-03-05	Mark Abraham	Fix Andersen thermostats	commit \| commitdiff \| tree \| snapshot
2015-02-24	Ake Sandgren	The test for HAVE_CXX11_REGEX fails since it doesn...	commit \| commitdiff \| tree \| snapshot
2015-02-24	Ake Sandgren	Checks should use correct CMAKE_REQUIRED_ variables	commit \| commitdiff \| tree \| snapshot
2015-02-14	Erik Marklund	gmx hbond no longer removes PBC when none is present	commit \| commitdiff \| tree \| snapshot
2015-02-12	Vedran Miletić	Fix removal of symlinks created during installation	commit \| commitdiff \| tree \| snapshot
2015-02-12	Roland Schulz	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2015-02-12	Berk Hess	Re-fixed PME bug with high OpenMP thread count	commit \| commitdiff \| tree \| snapshot
2015-02-04	Berk Hess	Correct CUDA kernel energy flag	commit \| commitdiff \| tree \| snapshot
2015-02-02	Mark Abraham	Avoid near-silent generation of zero energies	commit \| commitdiff \| tree \| snapshot
2015-02-02	Mark Abraham	Fix use of simd.h	commit \| commitdiff \| tree \| snapshot
2015-01-23	Mark Abraham	Update FindCUDA work-around	commit \| commitdiff \| tree \| snapshot
2015-01-21	Berk Hess	Corrected RDTSCP warning text	commit \| commitdiff \| tree \| snapshot
2015-01-16	Mark Abraham	Fix BlueGene/Q build with recent CMake	commit \| commitdiff \| tree \| snapshot
2015-01-15	Berk Hess	Fix allocation issue with VV integrator	commit \| commitdiff \| tree \| snapshot
2015-01-14	Mark Abraham	Fix and suppress warnings on BlueGene/Q	commit \| commitdiff \| tree \| snapshot
2015-01-08	Mark Abraham	Handle ivec* correctly in DD error message	commit \| commitdiff \| tree \| snapshot
2014-12-22	Berk Hess	Fixed pbc=xy + 2 walls + Verlet scheme	commit \| commitdiff \| tree \| snapshot
2014-12-22	Berk Hess	Fix bug FE + GPU + 2/3D domain decomposition	commit \| commitdiff \| tree \| snapshot
2014-12-18	Roland Schulz	Fix CMP0054 cmake 3.1.0 warnings	commit \| commitdiff \| tree \| snapshot
2014-12-15	Mark Abraham	Version bumps after new release	commit \| commitdiff \| tree \| snapshot
2014-12-15	Mark Abraham	Version 5.0.4	commit \| commitdiff \| tree \| snapshot
2014-12-15	Mark Abraham	Merge "Merge release-4-6 into release-5-0" into release-5-0	commit \| commitdiff \| tree \| snapshot
2014-12-11	Mark Abraham	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2014-12-11	Berk Hess	Added grompp error for pulling to negative distance	commit \| commitdiff \| tree \| snapshot
2014-12-10	Szilard Pall	Fix nstep command line override print	commit \| commitdiff \| tree \| snapshot
2014-12-09	Berk Hess	Fix recent bug with trilinic 1D DD	commit \| commitdiff \| tree \| snapshot
2014-12-09	Mark Abraham	Version bumps after new release	commit \| commitdiff \| tree \| snapshot
2014-12-09	Mark Abraham	Version 5.0.3	commit \| commitdiff \| tree \| snapshot
2014-12-09	Carsten Kutzner	Make tune_pme understand the "-nsteps" option. Fixes...	commit \| commitdiff \| tree \| snapshot
2014-12-08	Berk Hess	Fixed pull coord init with rate!=0, t_start!=0	commit \| commitdiff \| tree \| snapshot
2014-12-08	Mark Abraham	Fix group-scheme bug with changing LJ parameters in FE	commit \| commitdiff \| tree \| snapshot
2014-12-08	Berk Hess	Added PBC note to comm-mode=angular warning	commit \| commitdiff \| tree \| snapshot
2014-12-08	Carsten Kutzner	Fixed a typo in the manual.	commit \| commitdiff \| tree \| snapshot
2014-12-05	Berk Hess	Clarified grompp pull error messages	commit \| commitdiff \| tree \| snapshot
2014-12-05	Berk Hess	Avoid race on dvdl with Verlet+OpenMP+LINCS+FE+VV	commit \| commitdiff \| tree \| snapshot
2014-12-01	Berk Hess	Added warning for unnecessary soft-core	commit \| commitdiff \| tree \| snapshot
2014-11-29	Christian Wennberg	Fixed typo in amber99sb-ildn force field	commit \| commitdiff \| tree \| snapshot
2014-11-27	Mark Abraham	Remove use of interaction_mask_indices on BG/Q	commit \| commitdiff \| tree \| snapshot
2014-11-27	Mark Abraham	Merge branch release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2014-11-26	Roland Schulz	Fix clang with boost 1.46.1 and 1.47	commit \| commitdiff \| tree \| snapshot
2014-11-26	Ake Sandgren	Fix problem with mixed affinity mask on different nodes.	commit \| commitdiff \| tree \| snapshot
2014-11-26	Berk Hess	Fixed triclinic 1xNx1 domain decomposition	commit \| commitdiff \| tree \| snapshot
2014-11-25	Berk Hess	Fixed twin-range + freeze + constraints	commit \| commitdiff \| tree \| snapshot
2014-11-24	Berk Hess	Avoid NaN in rlist buffer calculation	commit \| commitdiff \| tree \| snapshot
2014-11-24	Magnus Lundborg	When writing TNG the input must contain molecule data.	commit \| commitdiff \| tree \| snapshot
2014-11-24	David van der...	Added warnings for ewald-geometry and surface-epsilon	commit \| commitdiff \| tree \| snapshot
2014-11-12	Berk Hess	Corrected parameter for sorting on search grid	commit \| commitdiff \| tree \| snapshot
2014-11-12	Berk Hess	Fix DD bonded interaction range print	commit \| commitdiff \| tree \| snapshot
2014-11-12	Carsten Kutzner	Updated some .mdp file variables to use "-" instead...	commit \| commitdiff \| tree \| snapshot
2014-11-09	Justin Lemkul	Removed spurious GLY dihedral in AMBER03.	commit \| commitdiff \| tree \| snapshot
2014-11-09	Viveca Lindahl	Fixed typo in cmake warning.	commit \| commitdiff \| tree \| snapshot
2014-11-09	Roland Schulz	Backport valgrind suppression	commit \| commitdiff \| tree \| snapshot
2014-10-29	Teemu Murtola	Improve analysis nbsearch grid mapping	commit \| commitdiff \| tree \| snapshot
2014-10-28	Teemu Murtola	Avoid common.h inclusion in CUDA code	commit \| commitdiff \| tree \| snapshot
2014-10-20	Berk Hess	Removed f_novirsum reduction in Verlet scheme	commit \| commitdiff \| tree \| snapshot
2014-10-20	Carsten Kutzner	Fix order of ED/swap blocks during checkpoint reading.	commit \| commitdiff \| tree \| snapshot
2014-10-17	Mark Abraham	Extend gmock to turn off socket listener	commit \| commitdiff \| tree \| snapshot
2014-10-13	Mark Abraham	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2014-10-07	Berk Hess	Fixes issue with vsiten and Verlet buffers	commit \| commitdiff \| tree \| snapshot
2014-10-06	Mark Abraham	Fix trjconv -split not closing files	commit \| commitdiff \| tree \| snapshot
2014-10-01	Mark Abraham	Version bumps after new release	commit \| commitdiff \| tree \| snapshot
2014-10-01	Mark Abraham	Version 5.0.2	commit \| commitdiff \| tree \| snapshot
2014-10-01	Carsten Kutzner	Allow gmx tune_pme to skip the check for command-line...	commit \| commitdiff \| tree \| snapshot
2014-09-30	Szilard Pall	Fix incorrect LJ cut-off with GPU + PME tuning	commit \| commitdiff \| tree \| snapshot
2014-09-30	Berk Hess	Avoid DLB with overloaded PME ranks	commit \| commitdiff \| tree \| snapshot
2014-09-30	Berk Hess	Added GPU local wait to load balancing	commit \| commitdiff \| tree \| snapshot
2014-09-30	Erik Lindahl	Avoid using function calls in OpenMP directives	commit \| commitdiff \| tree \| snapshot
2014-09-29	Berk Hess	Domain decomposition now checks the rlist buffer	commit \| commitdiff \| tree \| snapshot
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