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alexxy/gromacs.git
2019-12-31 Artem ZhmurovAdd description of GMX_FORCE_UPDATE_DEFAULT_GPU dev... commit | commitdiff | tree | snapshot
2019-12-31 Artem ZhmurovFix gpuupdate matrix commit | commitdiff | tree | snapshot
2019-12-30 Mark AbrahamTests that verify serializer behaviours commit | commitdiff | tree | snapshot
2019-12-30 Mark AbrahamRemove use of tuple in LINCS code for GPU implementation commit | commitdiff | tree | snapshot
2019-12-30 Paul BauerFix build error with wrong name from cached cmake file commit | commitdiff | tree | snapshot
2019-12-29 Erik LindahlWrite TPR body as opaque XDR data in big-endian format commit | commitdiff | tree | snapshot
2019-12-28 Artem ZhmurovChange the behavior of the GPU update UI commit | commitdiff | tree | snapshot
2019-12-28 M. Eric IrrgangResolve CMake ambiguities for gmxapi Python package... commit | commitdiff | tree | snapshot
2019-12-28 Paul BauerChange releng to give information about Gitlab commit | commitdiff | tree | snapshot
2019-12-28 Paul BauerExtend information for GPU update commit | commitdiff | tree | snapshot
2019-12-28 Paul BauerExclude build-system files from CPack commit | commitdiff | tree | snapshot
2019-12-28 Mark AbrahamMerge "Merge origin/release-2019 into release-2020... commit | commitdiff | tree | snapshot
2019-12-28 Paul BauerRemove membed from features commit | commitdiff | tree | snapshot
2019-12-28 Paul BauerDeprecate support for Armv7 commit | commitdiff | tree | snapshot
2019-12-27 Artem ZhmurovAdd a note to the log file when -update gpu was set... commit | commitdiff | tree | snapshot
2019-12-27 Paul BauerAdd copyright check and improve cache usage commit | commitdiff | tree | snapshot
2019-12-27 Paul BauerMerge origin/release-2019 into release-2020 commit | commitdiff | tree | snapshot
2019-12-27 Artem ZhmurovClean bad auto-format in decidegpuusage doxygen comments commit | commitdiff | tree | snapshot
2019-12-27 M. Eric IrrgangUpdate intersphinx configuration. commit | commitdiff | tree | snapshot
2019-12-26 M. Eric IrrgangSet Sphinx default role. commit | commitdiff | tree | snapshot
2019-12-26 M. Eric IrrgangFix external web link. commit | commitdiff | tree | snapshot
2019-12-26 M. Eric IrrgangClean up Sphinx interpreted text in the default role. commit | commitdiff | tree | snapshot
2019-12-23 Paul BauerAdd files for Gitlab CI commit | commitdiff | tree | snapshot
2019-12-23 Paul BauerPrepare for GROMACS 2019.6 commit | commitdiff | tree | snapshot
2019-12-23 Paul BauerGROMACS version 2019.5 commit | commitdiff | tree | snapshot
2019-12-23 Paul BauerRevert "Fix that tests intended for multiple ranks... commit | commitdiff | tree | snapshot
2019-12-20 Alan GrayAdd user guide doc for GPU buffer ops and comms env... commit | commitdiff | tree | snapshot
2019-12-20 Paul BauerFix wrong header in release notes commit | commitdiff | tree | snapshot
2019-12-20 Christian BlauRemove problematic output of gmx angle commit | commitdiff | tree | snapshot
2019-12-20 Paul BauerGROMACS 2020 release candidate commit | commitdiff | tree | snapshot
2019-12-20 Szilárd PállEnable buffer ops when GMX_GPU_DD_COMMS is set commit | commitdiff | tree | snapshot
2019-12-19 Paul BauerFix regressiontests failing with ctest commit | commitdiff | tree | snapshot
2019-12-19 Alan GrayRelease note for GPU direct communications commit | commitdiff | tree | snapshot
2019-12-19 Alan GrayFix PME tuning issue when PME-PP communications are... commit | commitdiff | tree | snapshot
2019-12-19 Szilárd PállPP-PME load balancing improvements commit | commitdiff | tree | snapshot
2019-12-19 M. Eric IrrgangAdd issue tracking for deprecations. commit | commitdiff | tree | snapshot
2019-12-19 Berk HessFix mdrun appending invalidating energy files commit | commitdiff | tree | snapshot
2019-12-18 Alan GrayFix conditional on assertion for combining GPU Update... commit | commitdiff | tree | snapshot
2019-12-18 Szilárd PállAllow x D2H to overlap with GPU force compute commit | commitdiff | tree | snapshot
2019-12-18 M. Eric IrrgangUpdate reference to uncrustify and clang-format. commit | commitdiff | tree | snapshot
2019-12-18 Berk HessChange grompp decoupling SD warning to note commit | commitdiff | tree | snapshot
2019-12-18 Paul BauerAdd ability to set OMP and tMPI thread for ctest commit | commitdiff | tree | snapshot
2019-12-18 Paul BauerIgnore build host for CI builds commit | commitdiff | tree | snapshot
2019-12-17 Berk HessAdd note for COM removal with position restraints commit | commitdiff | tree | snapshot
2019-12-17 Artem ZhmurovClean-up buffer-ops CUDA kernels commit | commitdiff | tree | snapshot
2019-12-17 Paul BauerTest parallel mpi only with openmp commit | commitdiff | tree | snapshot
2019-12-17 Szilárd PállComment the use of waitCoordinatesCopiedToDevice commit | commitdiff | tree | snapshot
2019-12-17 Paul BauerSet correct dependency for doc build on gmxapi commit | commitdiff | tree | snapshot
2019-12-17 Paul BauerFix compiler warning about extra ; commit | commitdiff | tree | snapshot
2019-12-17 Szilárd PállAdd wallcycle counting to StatePropagatorDataGpu commit | commitdiff | tree | snapshot
2019-12-17 M. Eric IrrgangBe more specific with clang-format suggestions. commit | commitdiff | tree | snapshot
2019-12-17 Paul BauerFix formatting error commit | commitdiff | tree | snapshot
2019-12-17 Mark AbrahamFix that tests intended for multiple ranks run that way commit | commitdiff | tree | snapshot
2019-12-17 Pascal MerzFix exact continuation modular simulator commit | commitdiff | tree | snapshot
2019-12-16 Szilárd PállFix the GPU bonded stream with 1 PP + 1 PME rank commit | commitdiff | tree | snapshot
2019-12-16 Paul BauerFix torsion angle calculation commit | commitdiff | tree | snapshot
2019-12-15 Christian BlauFix densityfitting stalling and energies commit | commitdiff | tree | snapshot
2019-12-14 Mark AbrahamSimplify gmxapi RPATH handling commit | commitdiff | tree | snapshot
2019-12-13 Paul BauerCheck for using correct hwloc headers and runtime commit | commitdiff | tree | snapshot
2019-12-13 Artem ZhmurovClean up outdated comments in md.cpp commit | commitdiff | tree | snapshot
2019-12-12 Pascal MerzTest for expected output files commit | commitdiff | tree | snapshot
2019-12-12 Pascal MerzFix final configuration writing for modular simulator commit | commitdiff | tree | snapshot
2019-12-12 Szilárd PállAllow overlapping CPU force H2D with compute commit | commitdiff | tree | snapshot
2019-12-12 Christian BlauDensityfitting - enforce similarity increase with adapt... commit | commitdiff | tree | snapshot
2019-12-12 Artem ZhmurovAllow using GPU update with DD and update groups commit | commitdiff | tree | snapshot
2019-12-11 Artem ZhmurovEnable most of the pulling flavors with GPU update commit | commitdiff | tree | snapshot
2019-12-11 Mark AbrahamDocument DOMAINDECOMP(cr) correctly commit | commitdiff | tree | snapshot
2019-12-11 Artem ZhmurovClarify what setting zero to some output mdp options... commit | commitdiff | tree | snapshot
2019-12-11 M. Eric Irrganggmxapi landing page update. commit | commitdiff | tree | snapshot
2019-12-11 M. Eric Irrganggmxapi documentation readability improvements. commit | commitdiff | tree | snapshot
2019-12-11 M. Eric Irrganggmxapi documentation formatting improvements. commit | commitdiff | tree | snapshot
2019-12-10 Mark AbrahamSimplify gmxapi RPATH handling commit | commitdiff | tree | snapshot
2019-12-10 Artem ZhmurovSet GPU update to false in case of a rerun commit | commitdiff | tree | snapshot
2019-12-07 M. Eric IrrgangFinalize gmxapi 0.1 commit | commitdiff | tree | snapshot
2019-12-06 Mark AbrahamAvoid 386 O3 codegen bug commit | commitdiff | tree | snapshot
2019-12-06 M. Eric IrrgangAdd notes on MPI with gmxapi Python package. commit | commitdiff | tree | snapshot
2019-12-06 Artem ZhmurovPass array ref instead of casting to basic array in... commit | commitdiff | tree | snapshot
2019-12-06 Christian BlauChange arbitrary units to counts in RMSD distance distr... commit | commitdiff | tree | snapshot
2019-12-06 Mark AbrahamProvide more feedback when listed forces tests fail commit | commitdiff | tree | snapshot
2019-12-06 M. Eric Irrganggmxapi Python package usage prose. commit | commitdiff | tree | snapshot
2019-12-06 M. Eric IrrgangImprove pytest fixtures for directory management. commit | commitdiff | tree | snapshot
2019-12-05 Christian BlauRelax cross-correlation test precision commit | commitdiff | tree | snapshot
2019-12-04 Mark AbrahamAdded OpenCL build to release matrix commit | commitdiff | tree | snapshot
2019-12-04 Mark AbrahamRemoved unnecessary link_directories command for gtest commit | commitdiff | tree | snapshot
2019-12-04 Christian BlauRemove cutoff-scheme group from default mdout.mdp output commit | commitdiff | tree | snapshot
2019-12-03 Paul BauerThird beta release of GROMACS 2020 commit | commitdiff | tree | snapshot
2019-12-03 Paul BauerRevert "Enable GPU update with DD when GPU comm feature... commit | commitdiff | tree | snapshot
2019-12-03 Paul BauerFix nightly build by correctly defining several commit | commitdiff | tree | snapshot
2019-12-03 Alan GrayEnable GPU update with DD when GPU comm features are... commit | commitdiff | tree | snapshot
2019-12-02 Paul BauerSet update to run on GPU by default if possible commit | commitdiff | tree | snapshot
2019-12-02 Jonathan VincentHeuristics for switching between CUDA spread/gather... commit | commitdiff | tree | snapshot
2019-12-02 Berk HessAdd check for coupled constraints for CUDA update commit | commitdiff | tree | snapshot
2019-12-02 Berk HessExtract LINCS CUDA helper functions commit | commitdiff | tree | snapshot
2019-12-02 Christian BlauRelax test tolerance for cross correlation measure... commit | commitdiff | tree | snapshot
2019-12-01 Paul BauerUse DOI for citing in reference manual section commit | commitdiff | tree | snapshot
2019-12-01 Mark AbrahamFurther improve taskassignment exception handling commit | commitdiff | tree | snapshot
2019-11-29 Berk HessMerge "Merge branch release-2019 into release-2020... commit | commitdiff | tree | snapshot
2019-11-29 Paul BauerFix unaligned access with AVX512 commit | commitdiff | tree | snapshot
2019-11-29 Paul BauerFix build error without thread or regular mpi commit | commitdiff | tree | snapshot
2019-11-29 Artem ZhmurovPrint OpenCL error info in case of failed assertion... commit | commitdiff | tree | snapshot
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