alexxy/gromacs.git
2018-12-22 Paul BauerFix mdrun -nb GPU on non-gpu builds
2018-12-22 Szilárd PállRuntime check of device OpenCL support
2018-12-22 Mark AbrahamFix unused parameter warning
2018-12-22 Aleksei IupinovAdd a sanity check for OpenCL devices
2018-12-22 Jiannan LiuMissing factor of 2 in cos-acceleration
2018-12-21 Szilárd PállMake jenkins own-fftw verify use local tarball
2018-12-20 Szilárd PállFix CUDA compiled target-device compatibility check
2018-12-20 Szilárd PállCorrect CUDA compatibility check
2018-12-20 Szilárd PállMerge "Merge branch release-2018 into release-2019...
2018-12-19 M. Eric IrrgangRestrict number of OpenMP threads during testing.
2018-12-17 Szilárd PállFix GMX_BUILD_OWN_FFTW_URL CMake cache entry type
2018-12-17 Paul BauerAdd matrix entry to test external FFTW build
2018-12-17 Paul BauerFix FFTW build
2018-12-17 Paul BauerCopy parallelisation info from old webpage
2018-12-17 Paul BauerMerge branch release-2018 into release-2019
2018-12-14 Berk HessFix LINCS triangle constraining with OpenMP
2018-12-14 Paul BauerGROMACS 2019 Release candidate
2018-12-14 Berk HessFixed nullptr derefence in LINCS error
2018-12-14 Magnus LundborgSet HAVE_LMFIT properly
2018-12-14 Berk HessFix LINCS triangle constraining with OpenMP
2018-12-14 Szilárd PállEnable ARMPL in the armclang build
2018-12-13 Roland SchulzRemove unused MdrunComparisonFixture
2018-12-13 Szilárd PállAvoid spurious timing in bonded GPU launch subcounter
2018-12-13 Szilárd PállDocument the FP exception in cuFFT 7.0
2018-12-12 Berk HessTemporary fix for OpenCL PME gather
2018-12-12 Szilárd PállImprove DLB report/note
2018-12-11 Paul BauerProperly check for MSVC in build script
2018-12-11 Szilárd PállTweak the bonded GPU energy copy/wait operations
2018-12-11 Berk HessFix update groups with 2D/3D DLB
2018-12-11 Berk HessMake large PME grids work on GPU
2018-12-11 Berk HessDocument mdrun mdp option modification
2018-12-10 Paul BauerDisable gmxapi by default
2018-12-10 Mark AbrahamMake only mdrun report process ID
2018-12-10 Pascal MerzFailproof signal conversion
2018-12-10 Paul BauerMake release notes html only
2018-12-10 Paul BauerChange toctree depth in PDF manual
2018-12-09 Mark AbrahamFix POWER8 and POWER9 build
2018-12-06 boristimUpdates to do_dssp
2018-12-06 Szilárd PállAdd Bonded GPU launch overhead cycle subcounter
2018-12-06 Szilárd PállSwap the order of GPU bonded and nonbonded launch
2018-12-06 Szilárd PállFix conditional in nonlocal nbnxn GPU work skipping
2018-12-06 Szilárd PállSplit nbnxn input copy and kernel launch
2018-12-05 Szilárd PállCorrect thread count in the PME GPU reduction
2018-12-05 Berk HessAdd update groups to parallelization docs
2018-12-05 Berk HessMake large PME grids work on GPU
2018-12-03 Mark AbrahamMove responsibility for PME reduction to its module
2018-12-03 Paul BauerFix energy history reading
2018-11-30 Paul BauerRecreate flowchart figure
2018-11-29 Paul BauerMore fixes for ImageMagick test script
2018-11-29 Viacheslav... Added reference-manual entry for MiMiC
2018-11-29 Paul BauerFix energy history reading
2018-11-29 Magnus LundborgMake pull with COM from previous step work with MPI
2018-11-29 Paul BauerMake Imagemagick availability more visible
2018-11-29 Mark AbrahamRemoved erronous manual variable handling
2018-11-29 Paul BauerFix reference manual image sizes
2018-11-29 Paul BauerFix reference manual doc build
2018-11-28 Paul BauerFix gcc-8 warnings
2018-11-28 Mark AbrahamIntroduce GpuBonded
2018-11-27 Szilárd PállAdd ARMPL support to admin script
2018-11-27 Szilárd PállAdd tweaks to support ARMPL for FFTs
2018-11-26 Paul BauerFix newline printing in -v output
2018-11-26 Berk HessFix FP exception in pull code
2018-11-26 Mark AbrahamClean up initial log output
2018-11-22 Mark AbrahamIntroduce PpForceWorkload
2018-11-22 Paul BauerPrepare for 2019 release candidate
2018-11-22 Paul BauerGROMACS 2019 third beta release
2018-11-21 Paul BauerMerge branch release-2018 into release-2019
2018-11-20 Mark AbrahamPartial revert of "Fix inefficient shell minimization"
2018-11-19 Joe Jordanfix unused variable warning from gmxapi compilation
2018-11-19 Mark AbrahamFix inefficient shell minimization
2018-11-18 David van der... Added citation for new analysis functionality.
2018-11-16 M. Eric IrrgangExpand gmxapi testing to include thread-MPI.
2018-11-16 M. Eric IrrgangRemove extraneous CMake config.
2018-11-16 Berk Hessgrompp now checks tau-p>=2*tau-t with NH+PR
2018-11-15 Paul BauerRefine FindSphinx
2018-11-15 M. Eric IrrgangNote GMX_ENABLE_CCACHE in build system docs.
2018-11-15 Mark AbrahamFix checkpoint restart of tpr with infinite step count
2018-11-15 Paul BauerRework GMXAPI tests
2018-11-15 Mark AbrahamRelax arbitrary tolerance on rerun test
2018-11-14 Mark AbrahamFix OpenCL mdrun from installed path
2018-11-14 Alan GrayAdded Alan and Jon to List of Contributers
2018-11-14 Mark AbrahamMore warning suppressions for QMMM code
2018-11-14 M. Eric IrrgangNote GMXAPI CMake variables and build targets.
2018-11-12 Paul BauerUpdate to prepare for 2018.5 point release
2018-11-12 Joe JordanAdd coolquotes
2018-11-12 Paul BauerVersion 2018.4
2018-11-11 Viacheslav... Fixing segfault in parallel MiMiC QM/MM runs
2018-11-11 David van der... Fix entropy calculation in gmx anaeig
2018-11-09 Mark AbrahamDisabled FPE checking for non-release builds
2018-11-09 David van der... Change get_atom_index to allow multiple molecules.
2018-11-08 Paul BauerGive error when rerun with identical file names
2018-11-08 Paul BauerIssue fatal error if checkpoint does not suit the .tpr
2018-11-08 Paul BauerActually fix gmx helix segmentation fault
2018-11-08 Berk HessFix bug with DD for dims without PBC
2018-11-08 Mark AbrahamPragma warning suppressins for icc+windows
2018-11-07 Szilárd PállRe-enable the armclang post-submit build
2018-11-07 Mark AbrahamSuppress clang warnings about QMMM code
2018-11-07 Paul BauerMark new cmake variables advanced
2018-11-07 Szilárd PállEliminate macro that expands to variable in PME GPU
2018-11-07 Szilárd PállEnsure minimum exec width of the PME OpenCL kernels
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