alexxy/gromacs.git
2019-05-02 Berk HessChange nbnxm FEP pointer to unique_ptr
2019-05-02 Mark AbrahamEnhance path search functions
2019-04-30 Artem ZhmurovCUDA version of SETTLE algorithm with basic tests
2019-04-30 Mark AbrahamTest the output of "gmx mdrun help"
2019-04-30 Berk HessAdd con/destructor for t_forcetable
2019-04-30 Berk HessConvert DispersionCorrection to a class
2019-04-29 Artem ZhmurovFix for the CUDA version of LINCS
2019-04-28 Artem ZhmurovCUDA version of LINCS constraints.
2019-04-27 Christian Blaumrc density map reading/writing
2019-04-27 Christian BlauThree dimensional coordiante transformation.
2019-04-26 Paul BauerAdd C++ coordinate file writing method.
2019-04-25 Szilárd PállFix clang warning about NULL use
2019-04-25 Szilárd PállAvoid using AtomLocality::Count as a valid value
2019-04-25 Christian Blaudensity fitting forces
2019-04-25 Artem ZhmurovImprovements for energy output test.
2019-04-25 Paul BauerAdd Interface to change coordinate file info
2019-04-25 Mark AbrahamUpdate style guide about class enums
2019-04-24 Szilárd PállFix CUDA fallback shmem gather reduction
2019-04-23 Mark AbrahamClarify pushing of interaction types
2019-04-23 Mark AbrahamUpdated clang -Weverything checks to clang-7
2019-04-22 Christian BlauThree dimensional gauss transform
2019-04-22 Christian BlauOne dimensional Gaussian function on lattice.
2019-04-18 Berk HessRemove nbnxm kernel type from pairlist generation
2019-04-18 Berk HessRemove charge groups from domdec and localtop
2019-04-18 Szilárd PállFix warnings & consolidate declarations
2019-04-18 Mark AbrahamCreate gmx::compat::optional
2019-04-18 Mark AbrahamMove pull work struct out of inputrec
2019-04-18 Mark AbrahamImprove swapcoords session lifetime management
2019-04-18 Paul BauerUpdate clang-tidy to check for dangling references
2019-04-18 Berk HessFix pdb-related issues
2019-04-17 Berk HessRemove group scheme search code
2019-04-17 Berk HessSimplify vsite PBC handling
2019-04-17 Prashanth KanduriMove shellfc code to the mdrun module
2019-04-17 Paul BauerEnable printing of known issues in commandline
2019-04-17 Paul BauerCreate gmx::compat::string_view
2019-04-17 Mark AbrahamFix post-submit
2019-04-17 Berk HessReduce nbnxm CPU kernel arguments
2019-04-17 Berk HessSimplify nbnxm shift force handling
2019-04-16 Szilárd PállMove functions operating on enerdata out of force.cpp
2019-04-16 Berk HessSimplify nbnxm buffer clearing
2019-04-16 Berk HessRemove RF_excl_correction()
2019-04-16 Szilárd PállRemove "coarse load balancing vars" from forcerec
2019-04-16 Paul BauerRefactor t_pindex
2019-04-16 Szilárd PállGroup scheme related cleanup
2019-04-16 Mark AbrahamRemoved mdrun -gcom
2019-04-16 Szilárd PállRemove Group scheme neighbor search wrapper
2019-04-16 Artem ZhmurovFix for the memory access error in constraints test.
2019-04-16 ejjordanDie with helpful note in case of incorrect input to...
2019-04-15 ejjordanfix formatting of editconf note
2019-04-10 Mark AbrahamStart making IMD and swap model IMDModule
2019-04-10 M. Eric IrrgangAdd GROMACS library dependency to gmxapi package.
2019-04-10 M. Eric IrrgangUse pybind11 to make a minimal C++ Python extension.
2019-04-10 Mark AbrahamReuse rvecs_differ in InteractiveMD module
2019-04-10 Mark AbrahamMake ImdSession into a Pimpl-ed class with factory...
2019-04-10 Mark AbrahamReform IMD module
2019-04-09 M. Eric IrrgangIntroduce gmxapi operations and basic data model.
2019-04-09 M. Eric Irrganggmxapi 2019 Q1/Q2 project roadmap.
2019-04-08 M. Eric IrrgangRemove stale "TODO".
2019-04-07 Paul BauerRemove t_topology from two preprocess tools
2019-04-05 Christian Blaudensityfitting - MDModule declaration
2019-04-05 Szilárd PállRevert "Temporarily disable ARM HPC compiler in post...
2019-04-04 Carsten KutznerEarly exit from mdrun if group scheme is detected in...
2019-04-04 Artem ZhmurovRemove isPressureCouplingStep(...)
2019-04-04 Paul BauerUpdate developer guide for changes to Gerrit
2019-04-04 Artem ZhmurovRemove isTemperatureCouplingStep(...)
2019-04-03 Mark AbrahamInitial deactivation of group scheme.
2019-04-03 Paul BauerFix post submit
2019-04-02 Paul BauerRefactor gpp_bond_atomtype
2019-04-02 Paul BauerAdd std::string case insensitive compare
2019-04-02 Paul BauerRefactor gmx_group_t to SimulationAtomGroups
2019-04-02 Paul BauerFix simulated annealing and add test
2019-04-02 Szilárd PállTemporarily disable ARM HPC compiler in post-submit
2019-04-01 Mark AbrahamMove MDModules initialization earlier
2019-04-01 Mark AbrahamMove enerdata ownership to mdrunner
2019-03-31 David van der... Removed confusing gpp_atomtype functions.
2019-03-29 M. Eric IrrgangPlumbing for gmxapi 2019 Q1/Q2 project roadmap.
2019-03-28 Berk HessSimplify nbnxm final force reduction
2019-03-28 Berk HessMove early return for nbnxm force reduction
2019-03-28 Berk HessMove PairlistSet declaration
2019-03-28 Roland SchulzFix UB vector usage
2019-03-28 Berk HessMove nbnxm domainSetup to GridSet
2019-03-28 Berk HessExtract nbnxm PairlistSets
2019-03-28 Mark AbrahamMove DomdecOptions into its own header
2019-03-28 Artem ZhmurovGPU naming conventions
2019-03-27 Berk HessFix nbnxm OpenCL with cluster size 4
2019-03-27 Prashanth KanduriMoving put_atoms_in_box_omp() to pbc.h
2019-03-27 Prashanth KanduriGetting rid of use_GPU(nbv) function
2019-03-27 Prashanth KanduriMove stat function declarations to a new stat.h
2019-03-26 Szilárd PállSkip PBC calculation when there are no listed forces
2019-03-26 Szilárd Pálldo_force_cutsVERLET cleanup
2019-03-25 Berk HessConvert nbnxn_pairlist_set_t to class PairlistSet
2019-03-25 Artem ZhmurovRemove unused headers
2019-03-25 Mark AbrahamSupport ArrayRef of EnumerationArray
2019-03-25 M. Eric IrrgangRemove uses of std::iterator mix-in.
2019-03-25 Mark AbrahamConvert gmx dump to module
2019-03-22 Christian Blaudensityfitting - serializer for mrc header data.
2019-03-22 Paul BauerAdd simple tests for symbol table
2019-03-21 Szilárd PállReorder PBC setup in do_force_lowlevel
2019-03-20 Berk HessMove around PairSearch code
2019-03-20 Mark AbrahamClean up mdrun help description
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