alexxy/gromacs.git
2018-07-05 Roland SchulzFix compiler warnings in OCL
2018-07-04 Roland SchulzEnable more warnings for Clang 6
2018-07-04 Roland SchulzFix ManageLmfit
2018-07-03 Roland SchulzFix post-submit issues
2018-07-03 Mark AbrahamFix clang CUDA build
2018-07-03 Roland SchulzChange ArrayRef::size_type to signed
2018-07-03 Berk HessConvert gmx_hash_t to C++
2018-07-03 Roland Schulzclang-tidy: misc-misplaced-widening-cast
2018-07-03 Roland Schulzclang-tidy: misc-misplaced-const
2018-07-03 Roland Schulzclang-tidy: more misc+readability
2018-07-03 Berk HessLocalize variables in dd_redistribute_cg()
2018-07-02 Berk HessConvert DD DLB cell size handling to C++
2018-07-02 Mark AbrahamRemove some pieces from forcerec.h
2018-07-02 Berk HessFix recent bug with 2D/3D DLB
2018-07-01 Roland SchulzEnable clang-tidy NullDereference
2018-07-01 Roland Schulzclang-tidy: readability-non-const-parameter (2/2)
2018-07-01 Berk HessRemoved smalloc.h from many DD files
2018-06-30 Roland Schulzclang-tidy: misc-string-compare+perf-value-param
2018-06-29 Roland Schulzclang-tidy: readability-non-const-parameter (1/2)
2018-06-29 Berk HessConvert gmx_domdec_constraints_t to C++
2018-06-29 Berk HessConvert gmx_domdec_specat_comm_t to C++
2018-06-29 Berk HessInitialize DD DLB variable
2018-06-29 Berk HessNew quote from a referee
2018-06-29 Roland Schulzclang-tidy: misc-suspicious-missing-comma
2018-06-29 Roland Schulzclang-tidy: add modernize nullptr & emplace
2018-06-29 Mark AbrahamNew quote from ISC2018
2018-06-29 Roland Schulzclang-tidy: readibility redundant
2018-06-29 Roland Schulzclang-tidy: misleading-indentation+noexcept-move
2018-06-29 Roland Schulzclang-tidy: Enable bugprone-integer-division
2018-06-29 Roland SchulzAdd clang-tidy to pre-submit
2018-06-28 Berk HessRename atomGroups in gmx_domdec_t to atomGrouping
2018-06-28 Berk HessClean up dd_move_cellx()
2018-06-28 Berk HessConvert gmx_domdec_sort_t to C++
2018-06-28 Berk HessChange BlockRanges to class RangePartitioning
2018-06-28 Roland Schulzclang-tidy: 4 readability checks
2018-06-28 Roland Schulzclang-tidy: performance-type-promotion-in-math-fn
2018-06-28 Roland SchulzClang-tidy: enable further tests
2018-06-27 Berk HessFix bug with 2D/3D triclinic DD
2018-06-27 Berk HessBase vacuum DD on atom coordinates
2018-06-27 Berk HessAdd consistency check to DDAtomRanges
2018-06-27 Berk HessPartial conversion of gmx_domdec_comm_t to C++
2018-06-27 Berk HessTemplate and overload dd_sendrecv functions
2018-06-27 Berk HessCorrect DD zone size loop bound
2018-06-25 Aleksei IupinovMove vectype_ops.clh into gpu_utils
2018-06-25 Aleksei IupinovMove the PME GPU kernel launch functions into pme-gpu...
2018-06-25 Mark AbrahamTest both internal and external clFFT build in Jenkins
2018-06-25 Mark AbrahamFix unused variable warnings
2018-06-24 Roland SchulzAllow GMX_OCL_DEBUG for any vendor
2018-06-23 Roland Schulzclang-tidy: Enable most bugprone checks
2018-06-23 Roland SchulzAllow to enable clang-tidy with GMX_CLANG_TIDY
2018-06-22 Mark AbrahamUpdate energy and trajectory frame types
2018-06-14 Kevin BoydChanged documentation on common errors during minimization
2018-06-14 Berk HessMinimization now detects infinite forces
2018-06-14 Aleksei IupinovEnsure PME with OpenCL does not attempt to pin
2018-06-14 Berk HessIntroduced DDAtomRanges class
2018-06-13 Mark AbrahamCall Constraints::setConstraints with other setup code
2018-06-13 Berk HessRemove LINCS prints to log file
2018-06-13 Mark AbrahamUse initializer lists for Lincs and Task
2018-06-13 Mark AbrahamUse more containers and views for constraints code
2018-06-13 Berk HessPartial conversion of gmx_domdec_t to C++
2018-06-13 Mark AbrahamBump lmfit support to version 7
2018-06-12 Mark AbrahamPrepare for GROMACS 2019 release notes
2018-06-12 David van der... Let gmx nmeig print thermochemistry.
2018-06-07 Paul BauerChange use of t_inpfile to std::vector
2018-06-07 Paul BauerRemove macros in input file reading
2018-06-07 Aleksei IupinovCompile most of PME GPU host code with OpenCL
2018-06-06 Berk HessClean up make_at2con
2018-06-06 Mark AbrahamMove IMD initialization and fuse DD setup
2018-06-06 Kevin BoydAdded to PME on GPU information in mdrun performance
2018-06-05 Mark AbrahamMake proper BoxDeformation class
2018-06-05 Berk HessMake nbnxn_grid_t counts and sizes arrays
2018-06-05 Mark AbrahamSeparate flexible constraint counting
2018-06-05 Mark AbrahamMake Constraints a proper class
2018-06-04 Mark AbrahamUpdate Awh initialization and lifetime management
2018-06-04 Mark AbrahamRemove redundant shell-code fatal errors
2018-06-04 Szilárd PállFix timing of clFFT kernels
2018-06-04 Magnus LundborgWrite lambdas and box to TNG at correct intervals
2018-06-01 Kevin BoydCosmetic fixes to mdp documentation
2018-05-31 Aleksei IupinovMerge pme.cu into pme-gpu-internal.cpp
2018-05-31 Aleksei IupinovPME OpenCL 3D FFT transform is implemented, using clFFT
2018-05-31 Aleksei IupinovMove pme-timings.cu to pme-gpu-timings.cpp
2018-05-31 Aleksei IupinovPrefer linking to system clFFT rather than bundled one
2018-05-31 Aleksei IupinovMove the PmeGpuSpecific structure into pme-gpu-types...
2018-05-31 Aleksei IupinovAdded the bundled clFFT into OpenCL builds
2018-05-31 Aleksei IupinovAdd GpuEventSynchronizer class
2018-05-31 Aleksei IupinovGather the PME GPU constants/macros in a single header
2018-05-30 Aleksei IupinovMake PME GPU structures use DeviceBuffer
2018-05-30 Roland SchulzFix MSAN build-type and error
2018-05-29 Szilárd PállSwitch to CUDA 9.2 + gcc 7
2018-05-28 Aleksei IupinovSupport persistent device context-derived data in PME...
2018-05-25 Mark AbrahamClean up force.h and its use
2018-05-24 Mark AbrahamRemove bDomDec from t_forcerec
2018-05-24 Berk HessFix grompp bug with blocks of same molecules
2018-05-24 Mark AbrahamMove responsibility for bonded threading decomposition
2018-05-24 Mark AbrahamRelocate GPU initialization for PME
2018-05-24 Berk HessSimplify idef_fe in calc_listed_lambda
2018-05-24 Mark AbrahamReform Ewald-module cmake handling
2018-05-24 Berk HessChange nbs in nbv to std::unique
2018-05-24 Berk HessConvert gmx_domdec_master_t to C++
2018-05-23 Mark AbrahamClean up PME testing
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