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Fix HTML links that contain file extensions
2014-07-11 Teemu MurtolaFix HTML links that contain file extensions
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2014-07-08 Teemu MurtolaMake selections ignore \r in input
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2014-07-05 Teemu MurtolaReinstantiate unsorted index group check
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2014-07-05 Teemu MurtolaUpdate some installation-related docs
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2014-07-01 Teemu MurtolaAdjust include directory order for some corner cases
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2014-06-29 Teemu MurtolaRemove some hardcoded selection string buffers
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2014-06-28 Teemu MurtolaRemove overeager selection index group check
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2014-05-22 Teemu MurtolaFix static group list indices in selection prompt
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2014-05-01 Teemu MurtolaFix incorrect limits in FloatOptionStorage
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2014-04-07 Teemu MurtolaDoxygen documentation for version.h
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2014-04-04 Teemu MurtolaRemove ancient SGI-specific code
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2014-04-04 Teemu MurtolaClean up gmx_fatal.*
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2014-04-02 Teemu MurtolaMove string2.* to utility/cstringutil.*
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2014-04-01 Teemu MurtolaMove smalloc.h to utility/
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2014-03-31 Teemu MurtolaRemove #include <...> for local files in gmx-view
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2014-03-31 Teemu MurtolaClean up smalloc.h
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2014-03-31 Teemu MurtolaMove some math headers away from legacyheaders/
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2014-03-31 Teemu MurtolaRemove dependency on commandline/ from oenv.cpp
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2014-03-30 Teemu MurtolaClean up string2.h-related includes
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2014-03-29 Teemu MurtolaOptimize intermodule dependencies
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2014-03-29 Teemu MurtolaImprove version information handling
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2014-03-29 Teemu MurtolaBetter include dependency graph generator
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2014-03-27 Teemu MurtolaMove include dependency checks to doc-check
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2014-03-27 Teemu MurtolaBetter automated Doxygen documentation checker
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2014-03-27 Teemu MurtolaMisc. Doxygen fixes
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2014-03-27 Teemu MurtolaMove thread_mpi to src/external/
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2014-03-24 Teemu MurtolaRemove gmxpreprocess from include path
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2014-03-18 Teemu MurtolaRemove interactive help from core selection parser
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2014-03-18 Teemu MurtolaImprove interactive selection input
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2014-03-17 Teemu MurtolaUpdate manual analysis section
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2014-03-11 Teemu MurtolaFix misc. Doxygen issues
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2014-03-08 Teemu MurtolaRemove some unnecessary declarations
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2014-03-02 Teemu MurtolaFix incorrect grid cell size in g_sas -nopbc
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2014-03-01 Teemu MurtolaMove default library path search to program context
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2014-02-28 Teemu MurtolaResidual SIMD Doxygen improvements
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2014-02-28 Teemu MurtolaMisc. Doxygen configuration changes
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2014-02-28 Teemu MurtolaConvert gmx-sas to the C++ framework
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2014-02-28 Teemu MurtolaAdd support for non-uniform X axis in array data
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2014-02-27 Teemu MurtolaImprove support for data sets in C++ tools
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2014-02-27 Teemu MurtolaImprove floating point comparisons in unit tests
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2014-02-26 Teemu MurtolaMisc. Doxygen build system improvements
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2014-02-26 Teemu MurtolaFix GMX_PRIu32 and GMX_PRIu64 for MSVC
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2014-02-20 Teemu MurtolaAdd documentation for using Doxygen
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2014-02-16 Teemu MurtolaImprove man page formatting slightly
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2014-02-16 Teemu MurtolaFix default enum values in help output
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2014-02-15 Teemu MurtolaFix some broken links in HTML pages
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2014-02-09 Teemu MurtolaShell completions through Options
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2014-02-09 Teemu MurtolaMake 'gmx -h' invariant wrt. provided options
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2014-02-09 Teemu MurtolaRemove old help formatting code
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2014-02-09 Teemu MurtolaMake FileNameOption behave more like old filenm parser
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2014-02-09 Teemu MurtolaImplement synopsis for help output
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2014-02-09 Teemu MurtolaRefactor new help formatting implementation
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2014-02-08 Teemu MurtolaFix & update docs for GMX_TEST_OPTIONS
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2014-02-06 Teemu MurtolaFix build of share/template when installed
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2014-02-03 Teemu MurtolaMerge "Merge release-4-6 into master"
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2014-02-03 Teemu MurtolaOptimize Doxygen build
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2014-02-02 Teemu MurtolaFix segfault in 'gmx -h'
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2014-02-02 Teemu MurtolaGet rid of src/programs/gmx/
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2014-02-02 Teemu MurtolaSimplify Options::setDescription() usage
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2014-02-02 Teemu MurtolaExtend valgrind suppressions for OpenMPI
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2014-02-01 Teemu MurtolaFix some issues reported by 'make depcheck doccheck'
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2014-01-31 Teemu MurtolaOverview docs for unit testing
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2014-01-30 Teemu MurtolaFix shell completions of ffMULT options
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2014-01-30 Teemu MurtolaOverview docs for wrapper binary implementation
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2014-01-30 Teemu MurtolaOverview docs for using Gromacs as a library
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2014-01-30 Teemu MurtolaRename ProgramInfo to CommandLineProgramContext
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2014-01-30 Teemu MurtolaRefactor ProgramInfo use
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2014-01-30 Teemu MurtolaMove command listing to 'gmx help commands'
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2014-01-29 Teemu MurtolaFixes to filename shell completions
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2014-01-29 Teemu MurtolaPrint common options to 'gmx -h'
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2014-01-29 Teemu MurtolaMerge "Merge branch 'release-4-6'"
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2014-01-28 Teemu MurtolaShell completion export from the wrapper binary
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2014-01-28 Teemu MurtolaExtend version information output
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2014-01-27 Teemu MurtolaSimplify ProgramInfo
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2014-01-22 Teemu MurtolaUse local ProgramInfo in CommandLineModuleManager
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2014-01-21 Teemu MurtolaRemove unused split.h
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2014-01-21 Teemu MurtolaImprove file name option help
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2014-01-20 Teemu MurtolaFix test reference data
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2014-01-20 Teemu MurtolaRewrite help output from Options
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2014-01-19 Teemu MurtolaFix installed headers
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2014-01-19 Teemu MurtolaMove md5.* to fileio/
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2014-01-19 Teemu MurtolaMove strdb.* to src/gromacs/fileio/
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2014-01-16 Teemu MurtolaFix build with GMX_BUILD_UNITTESTS=OFF
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2014-01-15 Teemu MurtolaSupport for 64-bit int and real valued Options
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2014-01-15 Teemu MurtolaRemove unused PCA_KEEP_ARGS
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2014-01-15 Teemu MurtolaUnit tests for parse_common_args()
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2014-01-15 Teemu MurtolaSimplify C array handling in C++ code
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2014-01-15 Teemu MurtolaReorganize shared unit test code
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2014-01-14 Teemu MurtolaDon't install links.dat
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2014-01-14 Teemu MurtolaSplit CommandLineHelpModule into a separate file
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2014-01-14 Teemu MurtolaFix line wrapping for long options
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2014-01-13 Teemu MurtolaMove writeps.* into fileio/
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2014-01-13 Teemu MurtolaMove gmxcomplex.h to gromacs/math/
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2014-01-13 Teemu MurtolaFix installation of HTML manual
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2014-01-09 Teemu MurtolaAdd messages for skipped tests in make check
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2014-01-09 Teemu MurtolaFix copyright check in admin/uncrustify.sh
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2014-01-08 Teemu MurtolaMove gmx_sort.* to src/gromacs/utility/
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2014-01-07 Teemu MurtolaMove gstat.h to gmxana/
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2014-01-07 Teemu MurtolaImprove include dependency script
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2014-01-05 Teemu MurtolaSupport for default values for SelectionOption
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