biod.pnpi.spb.ru
/
alexxy
/
gromacs.git
/ search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
fix thread-safety issue in affinity layout detection
2013-05-30
Szilard Pall
fix thread-safety issue in affinity layout detection
commit
|
commitdiff
|
tree
2013-05-30
Szilard Pall
add workaround for clang on AMD with FMA
commit
|
commitdiff
|
tree
2013-05-30
Szilard Pall
fix thread offset + stride check
commit
|
commitdiff
|
tree
2013-05-27
Szilard Pall
minor function argument cleanup
commit
|
commitdiff
|
tree
2013-04-17
Szilard Pall
CUDA PME kernels with analytical Ewald correction
commit
|
commitdiff
|
tree
2013-02-10
Szilárd Páll
use legacy CUDA non-bonded kernels only on Fermi
commit
|
commitdiff
|
tree
2013-01-24
Szilard Pall
added back cuda.h includes to fix missing CUDA_VERSION
commit
|
commitdiff
|
tree
2013-01-18
Szilard Pall
remove unnecessary cmake messages
commit
|
commitdiff
|
tree
2013-01-18
Szilárd Páll
fix OpenMP detection on Mac OS broken by a6fee0b
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Páll
added missing cleanup of some nbnxn_cuda data
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Páll
use the compiler version provided by CMake >=2.8.9
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Páll
note the reason for auto-disabling GPU support in CMake
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Páll
clarify wording of GPU driver-related notes
commit
|
commitdiff
|
tree
2013-01-17
Szilard Pall
don't use polling with new driver
commit
|
commitdiff
|
tree
2013-01-15
Szilárd Páll
disable OpenMP with all OS X gcc 4.2-based compilers
commit
|
commitdiff
|
tree
2013-01-11
Szilard Pall
time the GPU force clearing async launch overhead
commit
|
commitdiff
|
tree
2013-01-11
Szilard Pall
console and log output improvements
commit
|
commitdiff
|
tree
2013-01-02
Szilard Pall
improved reporting of failed affinity setting
commit
|
commitdiff
|
tree
2012-12-20
Szilard Pall
fix incorrect gmx_fatal argument order
commit
|
commitdiff
|
tree
2012-12-18
Szilard Pall
issue error if GPU ID is provided with GPU acc. off
commit
|
commitdiff
|
tree
2012-12-05
Szilard Pall
don't warn during configuring if no GPUs were found
commit
|
commitdiff
|
tree
2012-12-05
Szilard Pall
first step toward moving OpenMM support to contrib
commit
|
commitdiff
|
tree
2012-12-05
Szilard Pall
don't auto-set nvcc host compiler with cmake >2.8.9
commit
|
commitdiff
|
tree
2012-11-30
Szilard Pall
force C++ linking of the gpu_utils
commit
|
commitdiff
|
tree
2012-11-29
Szilard Pall
made errors during GPU detection non-fatal
commit
|
commitdiff
|
tree
2012-11-29
Szilard Pall
fix cmake re-running failure introduced by ef1127f
commit
|
commitdiff
|
tree
2012-11-29
Szilard Pall
automation for setting GMX_GPU & cmake GPU detection
commit
|
commitdiff
|
tree
2012-11-29
Szilard Pall
don't print nonbonded kernel info with GMX_NO_NONBONDED
commit
|
commitdiff
|
tree
2012-11-28
Szilard Pall
enable GPU emulation without GPU support
commit
|
commitdiff
|
tree
2012-11-28
Szilard Pall
use tMPI API for thread affinity setting
commit
|
commitdiff
|
tree
2012-11-23
Szilard Pall
removed group non-boneded call with verlet scheme
commit
|
commitdiff
|
tree
2012-11-22
Szilard Pall
unset MPI detection leftover cache variables
commit
|
commitdiff
|
tree
2012-11-19
Szilard Pall
always mark as advanced leftover FindCUDA variables
commit
|
commitdiff
|
tree
2012-11-09
Szilard Pall
only use CPU_COUNT if it's available
commit
|
commitdiff
|
tree
2012-11-09
Szilard Pall
also preferentiate .lib with GMX_PREFER_STATIC_LIBS
commit
|
commitdiff
|
tree
2012-11-07
Szilard Pall
auto-set nvcc host compiler with FindMPI detection
commit
|
commitdiff
|
tree
2012-11-07
Szilard Pall
detect externally set CPU affinity
commit
|
commitdiff
|
tree
2012-11-02
Szilard Pall
don't execute any mpi_info/mpiname in the path
commit
|
commitdiff
|
tree
2012-10-31
Szilard Pall
fix internal/external OpenMP thread affinity clash
commit
|
commitdiff
|
tree
2012-10-25
Szilárd Páll
fix false positive gcc 4.7 warning in libxdrf
commit
|
commitdiff
|
tree
2012-10-24
Szilárd Páll
enable GMX_PREFER_STATIC_LIBS CMake option on Mac OS X
commit
|
commitdiff
|
tree
2012-10-22
Szilard Pall
fix CUDA non-bonded kernel pointer assignment
commit
|
commitdiff
|
tree
2012-10-02
Szilard Pall
added Verlet scheme and NxN non-bonded functionality
commit
|
commitdiff
|
tree
2012-09-03
Szilard Pall
Merge branch 'release-4-5-patches' into release-4-6
commit
|
commitdiff
|
tree
2012-07-03
Szilárd Páll
Merge "Minor formatting and consistency changes to...
commit
|
commitdiff
|
tree
2012-06-27
Szilard Pall
fixes typo gmx_omp introduced by 697bcdc
commit
|
commitdiff
|
tree
2012-06-25
Szilard Pall
introduce gmx_omp wrapper for the OpenMP API
commit
|
commitdiff
|
tree
2012-05-22
Szilard Pall
added explicit sqrtf to the float version of norm
commit
|
commitdiff
|
tree
2012-05-02
Szilard Pall
removed -finline-functions from the release gcc flags
commit
|
commitdiff
|
tree
2012-04-26
Szilard Pall
Corrected fourierspacing description
commit
|
commitdiff
|
tree
2012-04-26
Szilárd Páll
Merge "fixed initial COM motion removal with multiple...
commit
|
commitdiff
|
tree
2012-04-19
Szilard Pall
compiler flag fixes
commit
|
commitdiff
|
tree
2012-04-18
Szilard Pall
added missing #ifdef around #include "thread_mpi.h"
commit
|
commitdiff
|
tree
2012-04-15
Szilard Pall
enable command line option cheking in mdrun
commit
|
commitdiff
|
tree
2012-03-28
Szilard Pall
Merge branch 'release-4-5-patches' into release-4-6
commit
|
commitdiff
|
tree
2012-03-14
Szilard Pall
fixed appending OpenMP compiler option to flag list
commit
|
commitdiff
|
tree
2012-02-29
Szilard Pall
Merge branch 'release-4-5-patches' into release-4-6
commit
|
commitdiff
|
tree
2012-02-11
Szilárd Páll
Merge changes If0c2f9d9,Ic2a8ad82 into release-4-5...
commit
|
commitdiff
|
tree
2012-02-09
Szilard Pall
renamed GMX_THREADS to GMX_THREAD_MPI
commit
|
commitdiff
|
tree
2012-02-02
Szilárd Páll
Merge "Append all ICC Performance flags only to Release...
commit
|
commitdiff
|
tree
2012-02-02
Szilárd Páll
Merge "Merges in threading branch as one squashed commit...
commit
|
commitdiff
|
tree
2012-02-02
Szilard Pall
fixed confusing nonbonded kernel pointer initialization
commit
|
commitdiff
|
tree
2012-01-17
Szilard Pall
Fixed timing measurements.
commit
|
commitdiff
|
tree
2011-10-06
Szilárd Páll
Merge "Removed duplicate CMake functionality" into...
commit
|
commitdiff
|
tree
2011-04-08
Szilard Pall
fixed g_tune_pme to pass correctly boolean arguments...
commit
|
commitdiff
|
tree
2011-02-23
Szilard Pall
added cmake warning when the cache generated on another...
commit
|
commitdiff
|
tree
2011-02-11
Szilard Pall
fixed buggy detection of hostname and time of build...
commit
|
commitdiff
|
tree
2010-11-08
Szilard Pall
Merge branch 'release-4-5-patches' of git.gromacs.org...
commit
|
commitdiff
|
tree
2010-11-05
Szilard Pall
Merge branch 'release-4-5-patches' of git.gromacs.org...
commit
|
commitdiff
|
tree
2010-11-03
Szilard Pall
now it's possible to run binaries in the build tree...
commit
|
commitdiff
|
tree
2010-10-29
Szilard Pall
Merge branch 'release-4-5-patches' of git.gromacs.org...
commit
|
commitdiff
|
tree
2010-10-29
Szilard Pall
enabled GMX_PREFER_STATIC_LIBS CMake option for CYGWIN
commit
|
commitdiff
|
tree
2010-10-29
Szilard Pall
fixed the default for OpenMM plugin dir location (bug...
commit
|
commitdiff
|
tree
2010-10-29
Szilard Pall
fixed make install-mdrun issue (bug #605)
commit
|
commitdiff
|
tree
2010-10-29
Szilard Pall
(re)added "-dev" suffix for the CMake hardcoded version...
commit
|
commitdiff
|
tree
2010-10-29
Szilard Pall
added CMake option GMX_PREFER_STATIC_LIBS (also fixes...
commit
|
commitdiff
|
tree
2010-10-06
Szilard Pall
fixed syntax error from commit bd5b2724
commit
|
commitdiff
|
tree
2010-10-05
Szilard Pall
improved option compatibility checking with OpenMM
commit
|
commitdiff
|
tree
2010-10-01
Szilard Pall
make install-mdrun now installes shared libs (fix for...
commit
|
commitdiff
|
tree
2010-09-20
Szilard Pall
FindFFT?[F] scripts can use a path provided in FFTWx...
commit
|
commitdiff
|
tree
2010-09-08
Szilard Pall
Fixed binary/lib suffixing inconsistencies (bug 539)
commit
|
commitdiff
|
tree
2010-09-07
Szilard Pall
fixed warnings caused by some uninitialized variables
commit
|
commitdiff
|
tree
2010-09-06
Szilard Pall
Mark advanced variables/options that are not relevant...
commit
|
commitdiff
|
tree
2010-09-06
Szilard Pall
Mark advanced GMX_BINARY_SUFFIX and GMX_LIBS_SUFFIX...
commit
|
commitdiff
|
tree
2010-09-01
Szilard Pall
Updated list of supported GPUs
commit
|
commitdiff
|
tree
2010-08-31
Szilard Pall
Merge branch 'release-4-5-patches' of git://git.gromacs...
commit
|
commitdiff
|
tree
2010-08-31
Szilard Pall
Improved option disabling on switching to OpenMM build...
commit
|
commitdiff
|
tree
2010-08-31
Szilard Pall
fixed/improved cmake FFTW3 detection
commit
|
commitdiff
|
tree
2010-08-03
Szilard Pall
minor addition to previus gcc 4.1.x disabling commit
commit
|
commitdiff
|
tree
2010-08-03
Szilard Pall
Removed gcc 4.1.x check as bug 431 turned out to be...
commit
|
commitdiff
|
tree
2010-06-24
Szilard Pall
additional fix to commit c5d62af07d01b8, now libmd...
commit
|
commitdiff
|
tree
2010-06-24
Szilard Pall
Merge branch 'master' of git@git.gromacs.org:gromacs
commit
|
commitdiff
|
tree
2010-06-24
Szilard Pall
cmake support for user-defined binary prefixes, custom...
commit
|
commitdiff
|
tree
2010-06-20
Szilard Pall
Merge branch 'master' of git@git.gromacs.org:gromacs
commit
|
commitdiff
|
tree
2010-06-20
Szilard Pall
Fixed GCC version checking in cmake
commit
|
commitdiff
|
tree
2010-06-17
Szilard Pall
Merge branch 'master' of git@git.gromacs.org:gromacs
commit
|
commitdiff
|
tree
2010-06-17
Szilard Pall
fixed minor bug in openmm_wrapper.cpp
commit
|
commitdiff
|
tree
2010-06-17
Szilard Pall
Implemented (buggy) gcc 4.1.x check in cmake.
commit
|
commitdiff
|
tree
2010-06-10
Szilard Pall
fixed warnings in gmx_gpu_utils and openmm_wrapper
commit
|
commitdiff
|
tree
2010-06-10
Szilard Pall
Merge branch 'master' of git@git.gromacs.org:gromacs
commit
|
commitdiff
|
tree
next