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2013-06-27	Szilard Pall	Adapted clang-AMD-FMA workaround for both C and C++	commit \| commitdiff \| tree
2013-05-30	Szilard Pall	fix thread-safety issue in affinity layout detection	commit \| commitdiff \| tree
2013-05-30	Szilard Pall	add workaround for clang on AMD with FMA	commit \| commitdiff \| tree
2013-05-30	Szilard Pall	fix thread offset + stride check	commit \| commitdiff \| tree
2013-05-27	Szilard Pall	minor function argument cleanup	commit \| commitdiff \| tree
2013-04-17	Szilard Pall	CUDA PME kernels with analytical Ewald correction	commit \| commitdiff \| tree
2013-01-24	Szilard Pall	added back cuda.h includes to fix missing CUDA_VERSION	commit \| commitdiff \| tree
2013-01-18	Szilard Pall	remove unnecessary cmake messages	commit \| commitdiff \| tree
2013-01-17	Szilard Pall	don't use polling with new driver	commit \| commitdiff \| tree
2013-01-11	Szilard Pall	time the GPU force clearing async launch overhead	commit \| commitdiff \| tree
2013-01-11	Szilard Pall	console and log output improvements	commit \| commitdiff \| tree
2013-01-02	Szilard Pall	improved reporting of failed affinity setting	commit \| commitdiff \| tree
2012-12-20	Szilard Pall	fix incorrect gmx_fatal argument order	commit \| commitdiff \| tree
2012-12-18	Szilard Pall	issue error if GPU ID is provided with GPU acc. off	commit \| commitdiff \| tree
2012-12-05	Szilard Pall	don't warn during configuring if no GPUs were found	commit \| commitdiff \| tree
2012-12-05	Szilard Pall	first step toward moving OpenMM support to contrib	commit \| commitdiff \| tree
2012-12-05	Szilard Pall	don't auto-set nvcc host compiler with cmake >2.8.9	commit \| commitdiff \| tree
2012-11-30	Szilard Pall	force C++ linking of the gpu_utils	commit \| commitdiff \| tree
2012-11-29	Szilard Pall	made errors during GPU detection non-fatal	commit \| commitdiff \| tree
2012-11-29	Szilard Pall	fix cmake re-running failure introduced by ef1127f	commit \| commitdiff \| tree
2012-11-29	Szilard Pall	automation for setting GMX_GPU & cmake GPU detection	commit \| commitdiff \| tree
2012-11-29	Szilard Pall	don't print nonbonded kernel info with GMX_NO_NONBONDED	commit \| commitdiff \| tree
2012-11-28	Szilard Pall	enable GPU emulation without GPU support	commit \| commitdiff \| tree
2012-11-28	Szilard Pall	use tMPI API for thread affinity setting	commit \| commitdiff \| tree
2012-11-23	Szilard Pall	removed group non-boneded call with verlet scheme	commit \| commitdiff \| tree
2012-11-22	Szilard Pall	unset MPI detection leftover cache variables	commit \| commitdiff \| tree
2012-11-19	Szilard Pall	always mark as advanced leftover FindCUDA variables	commit \| commitdiff \| tree
2012-11-09	Szilard Pall	only use CPU_COUNT if it's available	commit \| commitdiff \| tree
2012-11-09	Szilard Pall	also preferentiate .lib with GMX_PREFER_STATIC_LIBS	commit \| commitdiff \| tree
2012-11-07	Szilard Pall	auto-set nvcc host compiler with FindMPI detection	commit \| commitdiff \| tree
2012-11-07	Szilard Pall	detect externally set CPU affinity	commit \| commitdiff \| tree
2012-11-02	Szilard Pall	don't execute any mpi_info/mpiname in the path	commit \| commitdiff \| tree
2012-10-31	Szilard Pall	fix internal/external OpenMP thread affinity clash	commit \| commitdiff \| tree
2012-10-22	Szilard Pall	fix CUDA non-bonded kernel pointer assignment	commit \| commitdiff \| tree
2012-10-02	Szilard Pall	added Verlet scheme and NxN non-bonded functionality	commit \| commitdiff \| tree
2012-09-03	Szilard Pall	Merge branch 'release-4-5-patches' into release-4-6	commit \| commitdiff \| tree
2012-06-27	Szilard Pall	fixes typo gmx_omp introduced by 697bcdc	commit \| commitdiff \| tree
2012-06-25	Szilard Pall	introduce gmx_omp wrapper for the OpenMP API	commit \| commitdiff \| tree
2012-05-22	Szilard Pall	added explicit sqrtf to the float version of norm	commit \| commitdiff \| tree
2012-05-02	Szilard Pall	removed -finline-functions from the release gcc flags	commit \| commitdiff \| tree
2012-04-26	Szilard Pall	Corrected fourierspacing description	commit \| commitdiff \| tree
2012-04-19	Szilard Pall	compiler flag fixes	commit \| commitdiff \| tree
2012-04-18	Szilard Pall	added missing #ifdef around #include "thread_mpi.h"	commit \| commitdiff \| tree
2012-04-15	Szilard Pall	enable command line option cheking in mdrun	commit \| commitdiff \| tree
2012-03-28	Szilard Pall	Merge branch 'release-4-5-patches' into release-4-6	commit \| commitdiff \| tree
2012-03-14	Szilard Pall	fixed appending OpenMP compiler option to flag list	commit \| commitdiff \| tree
2012-02-29	Szilard Pall	Merge branch 'release-4-5-patches' into release-4-6	commit \| commitdiff \| tree
2012-02-09	Szilard Pall	renamed GMX_THREADS to GMX_THREAD_MPI	commit \| commitdiff \| tree
2012-02-02	Szilard Pall	fixed confusing nonbonded kernel pointer initialization	commit \| commitdiff \| tree
2012-01-17	Szilard Pall	Fixed timing measurements.	commit \| commitdiff \| tree
2011-04-08	Szilard Pall	fixed g_tune_pme to pass correctly boolean arguments...	commit \| commitdiff \| tree
2011-02-23	Szilard Pall	added cmake warning when the cache generated on another...	commit \| commitdiff \| tree
2011-02-11	Szilard Pall	fixed buggy detection of hostname and time of build...	commit \| commitdiff \| tree
2010-11-08	Szilard Pall	Merge branch 'release-4-5-patches' of git.gromacs.org...	commit \| commitdiff \| tree
2010-11-05	Szilard Pall	Merge branch 'release-4-5-patches' of git.gromacs.org...	commit \| commitdiff \| tree
2010-11-03	Szilard Pall	now it's possible to run binaries in the build tree...	commit \| commitdiff \| tree
2010-10-29	Szilard Pall	Merge branch 'release-4-5-patches' of git.gromacs.org...	commit \| commitdiff \| tree
2010-10-29	Szilard Pall	enabled GMX_PREFER_STATIC_LIBS CMake option for CYGWIN	commit \| commitdiff \| tree
2010-10-29	Szilard Pall	fixed the default for OpenMM plugin dir location (bug...	commit \| commitdiff \| tree
2010-10-29	Szilard Pall	fixed make install-mdrun issue (bug #605)	commit \| commitdiff \| tree
2010-10-29	Szilard Pall	(re)added "-dev" suffix for the CMake hardcoded version...	commit \| commitdiff \| tree
2010-10-29	Szilard Pall	added CMake option GMX_PREFER_STATIC_LIBS (also fixes...	commit \| commitdiff \| tree
2010-10-06	Szilard Pall	fixed syntax error from commit bd5b2724	commit \| commitdiff \| tree
2010-10-05	Szilard Pall	improved option compatibility checking with OpenMM	commit \| commitdiff \| tree
2010-10-05	Szilard Pall	improved option compatibility checking with OpenMM	commit \| commitdiff \| tree
2010-10-05	Szilard Pall	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-10-01	Szilard Pall	make install-mdrun now installes shared libs (fix for...	commit \| commitdiff \| tree
2010-09-20	Szilard Pall	FindFFT?[F] scripts can use a path provided in FFTWx...	commit \| commitdiff \| tree
2010-09-10	Szilard Pall	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-09-10	Szilard Pall	Merge remote branch 'origin/release-4-5-patches'	commit \| commitdiff \| tree
2010-09-09	Szilard Pall	Merge branch 'master' of git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-09-09	Szilard Pall	added gmx_membed.c to CMakeLists.txt for mdrun	commit \| commitdiff \| tree
2010-09-08	Szilard Pall	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree
2010-09-08	Szilard Pall	Fixed binary/lib suffixing inconsistencies (bug 539)	commit \| commitdiff \| tree
2010-09-07	Szilard Pall	fixed warnings caused by some uninitialized variables	commit \| commitdiff \| tree
2010-09-06	Szilard Pall	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree
2010-09-06	Szilard Pall	Mark advanced variables/options that are not relevant...	commit \| commitdiff \| tree
2010-09-06	Szilard Pall	Mark advanced GMX_BINARY_SUFFIX and GMX_LIBS_SUFFIX...	commit \| commitdiff \| tree
2010-09-01	Szilard Pall	Updated list of supported GPUs	commit \| commitdiff \| tree
2010-08-31	Szilard Pall	Merge branch 'release-4-5-patches' of git://git.gromacs...	commit \| commitdiff \| tree
2010-08-31	Szilard Pall	Improved option disabling on switching to OpenMM build...	commit \| commitdiff \| tree
2010-08-31	Szilard Pall	fixed/improved cmake FFTW3 detection	commit \| commitdiff \| tree
2010-08-03	Szilard Pall	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree
2010-08-03	Szilard Pall	minor addition to previus gcc 4.1.x disabling commit	commit \| commitdiff \| tree
2010-08-03	Szilard Pall	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree
2010-08-03	Szilard Pall	Removed gcc 4.1.x check as bug 431 turned out to be...	commit \| commitdiff \| tree
2010-06-24	Szilard Pall	additional fix to commit c5d62af07d01b8, now libmd...	commit \| commitdiff \| tree
2010-06-24	Szilard Pall	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-06-24	Szilard Pall	cmake support for user-defined binary prefixes, custom...	commit \| commitdiff \| tree
2010-06-20	Szilard Pall	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-06-20	Szilard Pall	Fixed GCC version checking in cmake	commit \| commitdiff \| tree
2010-06-17	Szilard Pall	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-06-17	Szilard Pall	fixed minor bug in openmm_wrapper.cpp	commit \| commitdiff \| tree
2010-06-17	Szilard Pall	Implemented (buggy) gcc 4.1.x check in cmake.	commit \| commitdiff \| tree
2010-06-10	Szilard Pall	fixed warnings in gmx_gpu_utils and openmm_wrapper	commit \| commitdiff \| tree
2010-06-10	Szilard Pall	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-06-10	Szilard Pall	fixed logging output in do_md_openmm	commit \| commitdiff \| tree
2010-06-03	Szilard Pall	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-06-01	Szilard Pall	Merge branch 'master' of git@git.gromacs.org:gromacs	commit \| commitdiff \| tree
2010-06-01	Szilard Pall	fixed OpenMM interaction type check	commit \| commitdiff \| tree
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