BioD PNPI Git Repos - alexxy/gromacs.git/search

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2015-12-08	Mark Abraham	Merge branch 'release-5-0' into release-5-1	commit \| commitdiff \| tree
2015-12-08	Mark Abraham	Fix Trotter integration	commit \| commitdiff \| tree
2015-11-24	Mark Abraham	Fix error in multi-sim communication	commit \| commitdiff \| tree
2015-11-14	Mark Abraham	Fix walltime measurement with bgclang	commit \| commitdiff \| tree
2015-11-11	Mark Abraham	Merge release-5-0 into release-5-1	commit \| commitdiff \| tree
2015-11-10	Mark Abraham	Bump patch version to prepare for 5.1.2	commit \| commitdiff \| tree
2015-11-04	Mark Abraham	Version 5.1.1	commit \| commitdiff \| tree
2015-10-28	Mark Abraham	Suppress warnings when we have OpenCL 2.0 support	commit \| commitdiff \| tree
2015-10-19	Mark Abraham	Fix cycle subcounters	commit \| commitdiff \| tree
2015-10-14	Mark Abraham	Merge release-5-0 into release-5-1	commit \| commitdiff \| tree
2015-10-14	Mark Abraham	Version bumps after release	commit \| commitdiff \| tree
2015-10-14	Mark Abraham	Version 5.0.7	commit \| commitdiff \| tree
2015-10-13	Mark Abraham	Merge branch release-4-6 into release-5-0	commit \| commitdiff \| tree
2015-10-07	Mark Abraham	Fixed FFTW detection status message location	commit \| commitdiff \| tree
2015-10-05	Mark Abraham	Merge release-5-0 into release-5-1	commit \| commitdiff \| tree
2015-10-03	Mark Abraham	Fix FindFFTW behaviour	commit \| commitdiff \| tree
2015-10-03	Mark Abraham	Fix mdrun -nb auto -rerun with GPU and energy groups	commit \| commitdiff \| tree
2015-09-26	Mark Abraham	Fix reaction-field warning message	commit \| commitdiff \| tree
2015-09-06	Mark Abraham	Add GROMACS 5 paper to paper lists	commit \| commitdiff \| tree
2015-08-19	Mark Abraham	Harden FindSphinx.cmake	commit \| commitdiff \| tree
2015-08-14	Mark Abraham	Bump patch version to prepare for 5.1.1	commit \| commitdiff \| tree
2015-08-14	Mark Abraham	Version 5.1	commit \| commitdiff \| tree
2015-08-13	Mark Abraham	Make it easier to find selection help	commit \| commitdiff \| tree
2015-08-13	Mark Abraham	Make it easier to find selection help	commit \| commitdiff \| tree
2015-08-13	Mark Abraham	Re-enable multi-GPU support in OpenCL for thread MPI	commit \| commitdiff \| tree
2015-08-13	Mark Abraham	Documentation fixes	commit \| commitdiff \| tree
2015-08-13	Mark Abraham	Avoid FP exception with empty .mdp file	commit \| commitdiff \| tree
2015-08-12	Mark Abraham	Add documentation for energygrps with GPUs	commit \| commitdiff \| tree
2015-08-12	Mark Abraham	Add to author lists	commit \| commitdiff \| tree
2015-08-11	Mark Abraham	Abort if PME tuning is active and counters reset	commit \| commitdiff \| tree
2015-08-10	Mark Abraham	Require tune_pme to take -mdrun parameter	commit \| commitdiff \| tree
2015-08-08	Mark Abraham	Merge branch release-5-0 into release-5-1	commit \| commitdiff \| tree
2015-08-08	Mark Abraham	Fix docs of ftypes of dihedrals	commit \| commitdiff \| tree
2015-08-06	Mark Abraham	Fix FindNVML.cmake	commit \| commitdiff \| tree
2015-08-06	Mark Abraham	Fix thread-affinity checking	commit \| commitdiff \| tree
2015-08-05	Mark Abraham	Fix em dash in new reference	commit \| commitdiff \| tree
2015-08-04	Mark Abraham	Merge release-5-0 into release-5-1	commit \| commitdiff \| tree
2015-08-03	Mark Abraham	Fix use of wrongly-named GCC minor-version variable	commit \| commitdiff \| tree
2015-08-03	Mark Abraham	Fix possible linking of libxml2 to zlib	commit \| commitdiff \| tree
2015-07-26	Mark Abraham	Merge branch release-5-0 into release-5-1	commit \| commitdiff \| tree
2015-07-26	Mark Abraham	Stop mdrun printing potentially undefined value	commit \| commitdiff \| tree
2015-07-26	Mark Abraham	Version bumps after new release	commit \| commitdiff \| tree
2015-07-24	Mark Abraham	Version 5.0.6	commit \| commitdiff \| tree
2015-07-19	Mark Abraham	Update advice about grompp -t	commit \| commitdiff \| tree
2015-07-08	Mark Abraham	Give bTypePerturbed a valid initial value	commit \| commitdiff \| tree
2015-07-08	Mark Abraham	Fix grompp .edr IO estimate for free-energy calcs	commit \| commitdiff \| tree
2015-07-06	Mark Abraham	First 5.1 release candidate	commit \| commitdiff \| tree
2015-07-03	Mark Abraham	Fix ThreadMPI GPU assumptions	commit \| commitdiff \| tree
2015-06-30	Mark Abraham	Document how to add and use NVML support	commit \| commitdiff \| tree
2015-06-30	Mark Abraham	Avoid GPU data race also with OpenCL	commit \| commitdiff \| tree
2015-06-30	Mark Abraham	Add support for flushing WDDM queue	commit \| commitdiff \| tree
2015-06-29	Mark Abraham	Merge "Merge branch release-5-0"	commit \| commitdiff \| tree
2015-06-29	Mark Abraham	Merge branch release-5-0	commit \| commitdiff \| tree
2015-06-29	Mark Abraham	Documented build types in developer guide	commit \| commitdiff \| tree
2015-06-29	Mark Abraham	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree
2015-06-29	Mark Abraham	Add MSAN build type	commit \| commitdiff \| tree
2015-06-29	Mark Abraham	Fix all use of nbnxn_simd.h	commit \| commitdiff \| tree
2015-06-27	Mark Abraham	Merge release-5-0 into master	commit \| commitdiff \| tree
2015-06-26	Mark Abraham	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree
2015-06-26	Mark Abraham	Fix mdrun -confout sometimes affecting final .edr frame	commit \| commitdiff \| tree
2015-06-25	Mark Abraham	Merge "Merge release-5-0 into master"	commit \| commitdiff \| tree
2015-06-25	Mark Abraham	Merge release-5-0 into master	commit \| commitdiff \| tree
2015-06-24	Mark Abraham	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree
2015-06-18	Mark Abraham	Fix typo in GMX_BUILD_OWN_FFTW message	commit \| commitdiff \| tree
2015-06-16	Mark Abraham	Stop people installing into the build tree	commit \| commitdiff \| tree
2015-06-16	Mark Abraham	Move code for managing mdrun -cpi and -append	commit \| commitdiff \| tree
2015-06-16	Mark Abraham	Fix pairs_nb not recognized as part of moleculetype	commit \| commitdiff \| tree
2015-06-16	Mark Abraham	Add unit tests for ArrayRef	commit \| commitdiff \| tree
2015-06-12	Mark Abraham	Fix commandline test data	commit \| commitdiff \| tree
2015-06-11	Mark Abraham	Merge "Merge branch release-4-6 into release-5-0" into...	commit \| commitdiff \| tree
2015-06-11	Mark Abraham	Handle timing better in Jenkins	commit \| commitdiff \| tree
2015-06-11	Mark Abraham	Clean up vsite interaction clean-up code	commit \| commitdiff \| tree
2015-06-09	Mark Abraham	Document limitations of trjconv -dump	commit \| commitdiff \| tree
2015-06-09	Mark Abraham	Merge branch release-4-6 into release-5-0	commit \| commitdiff \| tree
2015-06-05	Mark Abraham	Remove gmx_simd_check_and_reset_overflow	commit \| commitdiff \| tree
2015-06-04	Mark Abraham	Fix naming from "Gromacs" to "GROMACS"	commit \| commitdiff \| tree
2015-05-27	Mark Abraham	Fix warnings from GCC 5	commit \| commitdiff \| tree
2015-05-26	Mark Abraham	Avoid possible floating-point exception	commit \| commitdiff \| tree
2015-05-26	Mark Abraham	Convert ewald module to C++	commit \| commitdiff \| tree
2015-05-26	Mark Abraham	Fix use of hard-coded temporary filename	commit \| commitdiff \| tree
2015-05-23	Mark Abraham	Fix misuse of gmx_simd_check_and_reset_overflow	commit \| commitdiff \| tree
2015-05-21	Mark Abraham	Add integration test for empty domain	commit \| commitdiff \| tree
2015-05-19	Mark Abraham	Add checks for correct use of SIMD headers.	commit \| commitdiff \| tree
2015-05-19	Mark Abraham	Refactor FFTW setup	commit \| commitdiff \| tree
2015-05-17	Mark Abraham	Merge branch origin/release-5-0	commit \| commitdiff \| tree
2015-05-16	Mark Abraham	Suppress GCC5 warnings with internal Boost	commit \| commitdiff \| tree
2015-05-14	Mark Abraham	Fix own-FFTW build	commit \| commitdiff \| tree
2015-05-13	Mark Abraham	Version bumps after new release	commit \| commitdiff \| tree
2015-05-13	Mark Abraham	Version 5.0.5	commit \| commitdiff \| tree
2015-05-12	Mark Abraham	Fix uninitialized fields in grompp t_state	commit \| commitdiff \| tree
2015-05-11	Mark Abraham	Work around gcc 5 warnings with Google Test	commit \| commitdiff \| tree
2015-05-10	Mark Abraham	Merge "Merge branch release-5-0"	commit \| commitdiff \| tree
2015-05-09	Mark Abraham	Merge branch release-5-0	commit \| commitdiff \| tree
2015-05-06	Mark Abraham	Fixed recently-introduced couple-lambda warning message	commit \| commitdiff \| tree
2015-05-06	Mark Abraham	Fix SIMD unit tests on BG/Q	commit \| commitdiff \| tree
2015-05-05	Mark Abraham	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree
2015-04-30	Mark Abraham	Move GPU implementation to new interface	commit \| commitdiff \| tree
2015-04-28	Mark Abraham	Add application-clock NVML-based support for Quadro...	commit \| commitdiff \| tree
2015-04-27	Mark Abraham	Clean up remnants in mdrun	commit \| commitdiff \| tree
2015-04-24	Mark Abraham	Add developer docs for new documentation infrastructure	commit \| commitdiff \| tree
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