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Merge remote-tracking branch 'gerrit/release-4-6'
2012-06-24
Teemu Murtola
Merge remote-tracking branch 'gerrit/release-4-6'
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2012-06-13
Teemu Murtola
Updates to selection online help.
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2012-06-13
Teemu Murtola
Remove unnecessary *-impl.h files.
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2012-06-01
Teemu Murtola
More config.h cleanup.
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2012-05-30
Teemu Murtola
Make get_libdir() robust when run from build tree.
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2012-05-30
Teemu Murtola
Fix use after free in g_anaeig projection code.
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2012-05-30
Teemu Murtola
Fixed some memory leaks.
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2012-05-29
Teemu Murtola
Improve 'g_ana help'.
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2012-05-29
Teemu Murtola
Generic handling of online help topics.
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2012-05-29
Teemu Murtola
Additional features to TextTableFormatter.
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2012-05-29
Teemu Murtola
Separated string formatting used only for help.
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2012-05-29
Teemu Murtola
Reorganize linear algebra code.
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2012-05-24
Teemu Murtola
Merge "Code cleanup to avoid name collisions" into...
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2012-05-24
Teemu Murtola
Improve gmx::test::CommandLine.
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2012-05-24
Teemu Murtola
Improve analysisdata reference checks.
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2012-05-24
Teemu Murtola
Move common test code to testutils.
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2012-05-22
Teemu Murtola
Fixed 'g_ana select' broken by I8806b3e0.
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2012-05-20
Teemu Murtola
Remove unused defines from config.h, part 3.
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2012-05-20
Teemu Murtola
Remove unused defines from config.h, part 2.
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2012-05-20
Teemu Murtola
Remove unused defines from config.h, part 1.
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2012-05-19
Teemu Murtola
Simplify selection parsing methods signature.
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2012-05-19
Teemu Murtola
Option parsing through SelectionOptionManager.
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2012-05-18
Teemu Murtola
Simpler required selection input from a file.
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2012-05-18
Teemu Murtola
Split option code away from SelectionCollection.
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2012-05-17
Teemu Murtola
Merge "Fixing more clang warnings" into release-4-6
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2012-05-17
Teemu Murtola
Utility class for temporary unit testing files.
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2012-05-16
Teemu Murtola
Add C++ methods for accessing binary name etc.
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2012-05-16
Teemu Murtola
Remove libtool-specific hacks from oenv.c.
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2012-05-15
Teemu Murtola
Merge "Membed code merge from release-4-6"
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2012-05-14
Teemu Murtola
Fix clang warning introduced by new clang version.
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2012-05-09
Teemu Murtola
Simplify build system for unit tests.
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2012-05-09
Teemu Murtola
Detect module name from symlinks.
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2012-05-08
Teemu Murtola
Merge "Remove g_luck."
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2012-05-08
Teemu Murtola
Print list of modules with 'g_ana help'.
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2012-05-08
Teemu Murtola
Use gmx::File throughout CommandLineHelpWriter.
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2012-05-07
Teemu Murtola
Merge branch 'gerrit/release-4-5-patches' into release-4-6
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2012-05-07
Teemu Murtola
Generic handling for multiple cmd-line modules.
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2012-05-07
Teemu Murtola
Helper class for command-line utility tests.
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2012-05-07
Teemu Murtola
Remove libtool-specific hacks from statutil.c.
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2012-05-07
Teemu Murtola
Print default file names for command-line help.
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2012-05-05
Teemu Murtola
Set project version to 5.0-dev.
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2012-05-05
Teemu Murtola
Clean up cmake version generation.
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2012-05-05
Teemu Murtola
Drop support for pre-1.5.3 git for version info.
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2012-05-05
Teemu Murtola
Fix cmake version info generation.
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2012-05-05
Teemu Murtola
Removed autoconf version info generation.
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2012-05-03
Teemu Murtola
Remove g_luck.
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2012-05-03
Teemu Murtola
Remove replace.* and use replaceAll() in wman.c.
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2012-05-03
Teemu Murtola
Replace "%t" in option descriptions with time unit.
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2012-05-03
Teemu Murtola
Add "replace all" functionality to format.h.
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2012-05-03
Teemu Murtola
Add shared test fixture for string tests.
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2012-05-03
Teemu Murtola
Initial implementation of selection file input.
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2012-05-03
Teemu Murtola
Move OptionInfo to abstractoption.cpp.
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2012-05-03
Teemu Murtola
Implement markup substitution in command-line help.
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2012-05-03
Teemu Murtola
Rewrote command line help writer.
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2012-05-03
Teemu Murtola
Use GMX_NATIVE_WINDOWS in path.cpp.
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2012-05-02
Teemu Murtola
Move HAVE_CXX11 define to gmx_header_config.h.
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2012-05-02
Teemu Murtola
Move gmx_header_config under utility/.
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2012-05-02
Teemu Murtola
Removed unused code from src/kernel/.
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2012-05-02
Teemu Murtola
Make output_env struct properly private/opaque.
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2012-05-02
Teemu Murtola
Remove unused magic.h.
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2012-05-02
Teemu Murtola
Remove #include <config.h> from pull_rotation.h.
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2012-05-02
Teemu Murtola
Merge "Merge release-4-6 into master"
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2012-05-02
Teemu Murtola
Add tests for PDB-specific selection methods.
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2012-05-01
Teemu Murtola
Remove unnecessary uses of gmx_header_config.h.
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2012-05-01
Teemu Murtola
Remove unused files.
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2012-04-28
Teemu Murtola
Merge "Fix for sigaction" into release-4-6
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2012-04-27
Teemu Murtola
Fix version info generation for autoconf.
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2012-04-26
Teemu Murtola
Fix File::readToString() on Windows.
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2012-04-26
Teemu Murtola
More error checking to gmx::File.
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2012-04-26
Teemu Murtola
Move string array concatenation to format.h.
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2012-04-26
Teemu Murtola
Add text formatting classes.
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2012-04-26
Teemu Murtola
Misc. option fixes.
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2012-04-23
Teemu Murtola
Fix 'make install'.
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2012-04-23
Teemu Murtola
Better names for FileNameOption methods.
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2012-04-23
Teemu Murtola
Add a simple C++ file wrapper class.
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2012-04-21
Teemu Murtola
Split command line parsing to separate directory.
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2012-04-18
Teemu Murtola
Merge two separate nbsearch.h files.
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2012-04-18
Teemu Murtola
Split FileNameOption into a separate file.
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2012-04-18
Teemu Murtola
More reorganization of cmdlinehelpwriter.*.
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2012-04-18
Teemu Murtola
Renamed AsciiHelpWriter to CommandLineHelpWriter.
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2012-04-18
Teemu Murtola
Remove unused interactive code from indexutil.*.
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2012-04-17
Teemu Murtola
Merge fatalerror into utility.
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2012-04-16
Teemu Murtola
Add documentation for template.cpp.
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2012-04-15
Teemu Murtola
Updated Doxygen comments for selections.
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2012-04-14
Teemu Murtola
Merge "Clarified warning message" into release-4-5...
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2012-04-14
Teemu Murtola
Merge "Clarified warning string" into release-4-5-patches
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2012-04-14
Teemu Murtola
Enable command-line options for unit tests.
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2012-04-12
Teemu Murtola
Read PDB information in read_tps_conf().
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2012-04-11
Teemu Murtola
Removed Selection::indexGroup().
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2012-04-10
Teemu Murtola
Clean-up selection poscalc implementation.
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2012-04-10
Teemu Murtola
More comments for trajectoryanalysis.
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2012-04-10
Teemu Murtola
More comments for analysisdata.
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2012-04-03
Teemu Murtola
Removed unnecessary header.
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2012-04-01
Teemu Murtola
Replaced a default parameter with separate method.
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2012-04-01
Teemu Murtola
Improve selection interface (remove some pointers).
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2012-04-01
Teemu Murtola
Merge "Fixing interprocedular clang analyzer warnings."
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2012-03-30
Teemu Murtola
Fixing interprocedular clang analyzer warnings.
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2012-03-26
Teemu Murtola
Updates to template documentation.
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2012-03-26
Teemu Murtola
Fix more Doxygen warnings.
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2012-03-19
Teemu Murtola
Fix doxygen warnings in test code.
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