BioD PNPI Git Repos - alexxy/gromacs.git/search

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2021-05-30	Andrey Alekseenko	Disable false-positive warnings for ICPX 2021.2.0	commit \| commitdiff \| tree
2021-05-28	Paul Bauer	Fix missing template declaration	commit \| commitdiff \| tree
2021-05-26	Szilárd Páll	Eliminate redundant GPU force reduction event dependency	commit \| commitdiff \| tree
2021-05-26	Mark Abraham	Fix clang-format	commit \| commitdiff \| tree
2021-05-20	Joe Jordan	Localize variables in gmx_pme_do	commit \| commitdiff \| tree
2021-05-20	Paul Bauer	Disable ArrayRefDeathTests when building without assertions	commit \| commitdiff \| tree
2021-05-19	Artem Zhmurov	Fix clang-format	commit \| commitdiff \| tree
2021-05-18	Andrey Alekseenko	Fix CMake 3.20 warnings when compiling with IntelLLVM	commit \| commitdiff \| tree
2021-05-18	Andrey Alekseenko	Remove unused StatisticsStatus values	commit \| commitdiff \| tree
2021-05-11	Andrey Alekseenko	Add SYCL implementation of X/V scale kernel	commit \| commitdiff \| tree
2021-04-23	Artem Zhmurov	Apply clang-11 fixes for fileio	commit \| commitdiff \| tree
2021-04-23	Andrey Alekseenko	Fix beningn GCC 10.2 Wstringop-truncation warnings	commit \| commitdiff \| tree
2021-04-23	Artem Zhmurov	Clang-11 fixes for PME and FFT	commit \| commitdiff \| tree
2021-04-22	Andrey Alekseenko	Fix buffer overrun when invalid value passed to numPbcDimensions	commit \| commitdiff \| tree
2021-04-22	Mark Abraham	Improve UpdateGroups testing infra	commit \| commitdiff \| tree
2021-04-22	Joe Jordan	Vectors in history_t	commit \| commitdiff \| tree
2021-04-21	Pascal Merz	Introduce TimeStep and Offset strong types	commit \| commitdiff \| tree
2021-04-20	Paul Bauer	Fix clang-format	commit \| commitdiff \| tree
2021-04-20	Joe Jordan	clang-tidy-11 fixes for utils	commit \| commitdiff \| tree
2021-04-20	ejjordan	clang-tidy-11 fixes mdrun tests	commit \| commitdiff \| tree
2021-04-20	ejjordan	clang-tidy-11 fixes for listed_forces	commit \| commitdiff \| tree
2021-04-11	Artem Zhmurov	Add early returns in clearDeviceBuffer(...) in OpenCL...	commit \| commitdiff \| tree
2021-04-11	Roland Schulz	Fix compile with Intel oneAPI 2021.2	commit \| commitdiff \| tree
2021-04-11	Joe Jordan	Pass ref_t to initialize_lambdas	commit \| commitdiff \| tree
2021-04-10	Dmitry Morozov	Fix several errors when compiling with MSVC	commit \| commitdiff \| tree
2021-04-10	ejjordan	Minor forcerec cleanup	commit \| commitdiff \| tree
2021-04-10	Kevin Boyd	Clean up leaks	commit \| commitdiff \| tree
2021-03-25	Berk Hess	Localize variables in do_lbfgs()	commit \| commitdiff \| tree
2021-03-25	Joe Jordan	Use more vectors for EnergyOutput private members	commit \| commitdiff \| tree
2021-03-23	ejjordan	More const ref in shellfc	commit \| commitdiff \| tree
2021-03-22	Mark Abraham	Use StringToEnumValueConverter and enumValueToString...	commit \| commitdiff \| tree
2021-03-21	Szilárd Páll	Rename sendFToPpCudaDirect	commit \| commitdiff \| tree
2021-03-19	Andrey Alekseenko	Store buffer without offset in GpuForceReduction::Impl...	commit \| commitdiff \| tree
2021-03-19	ejjordan	Use ArrayRef in gmx_pme_send_parameters	commit \| commitdiff \| tree
2021-03-15	Paul Bauer	Add another cool quote.	commit \| commitdiff \| tree
2021-03-15	Artem Zhmurov	Do not overallocate shiftVec and fshifts buffers in...	commit \| commitdiff \| tree
2021-03-14	Szilárd Páll	Use existing PME f ready event in PmeForceSenderGpu	commit \| commitdiff \| tree
2021-03-10	Artem Zhmurov	Rework atom locality validity checks	commit \| commitdiff \| tree
2021-03-09	Artem Zhmurov	Unify gpu_copy_xq_to_gpu(...) function	commit \| commitdiff \| tree
2021-03-08	Andrey Alekseenko	Fix "wait before marking" synchronization bug	commit \| commitdiff \| tree
2021-03-05	Andrey Alekseenko	Fix typo introduced during nbfp_comb refactoring	commit \| commitdiff \| tree
2021-03-05	Szilárd Páll	Clarify the SYCL subgroup size on different targets	commit \| commitdiff \| tree
2021-03-05	Mark Abraham	Fix clang-format and naming of static variable	commit \| commitdiff \| tree
2021-03-02	Paul Bauer	Fix nightly clang-tidy build	commit \| commitdiff \| tree
2021-03-01	Mark Abraham	Various fixes for gmx xpm2ps	commit \| commitdiff \| tree
2021-02-28	Joe Jordan	Use more const ref in domdec API	commit \| commitdiff \| tree
2021-02-24	Artem Zhmurov	Add tests on asynchronous host-to-device copy and back	commit \| commitdiff \| tree
2021-02-22	Paul Bauer	Remove raw pointer to gmx_reverse_top	commit \| commitdiff \| tree
2021-02-22	Berk Hess	Reduce use of gmx_domdec_t in domdec_topology.cpp	commit \| commitdiff \| tree
2021-02-22	Paul Bauer	Refactor md_enums	commit \| commitdiff \| tree
2021-02-19	Joe Jordan	Revome unused code from nsgrid	commit \| commitdiff \| tree
2021-02-19	Andrey Alekseenko	Correct docs and add safeguard for non-pulsed electric...	commit \| commitdiff \| tree
2021-02-19	Andrey Alekseenko	Replace sqrt with std::sqrt in mdatoms.cpp	commit \| commitdiff \| tree
2021-02-19	Artem Zhmurov	Unify and clarify a couple of macro definitions in...	commit \| commitdiff \| tree
2021-02-18	Paul Bauer	Fix doxygen in SYCL code	commit \| commitdiff \| tree
2021-02-18	Andrey Alekseenko	SYCL NBNXM offload support	commit \| commitdiff \| tree
2021-02-18	Andrey Alekseenko	Fix clang-8-cuda-10.0 container	commit \| commitdiff \| tree
2021-02-17	ejjordan	Remove dead function declarations from forcerec	commit \| commitdiff \| tree
2021-02-15	Andrey Alekseenko	Rework SYCL CMake machinery to be compatible with hipSYCL	commit \| commitdiff \| tree
2021-02-15	Pascal Merz	Make the restraint history const during force calculation	commit \| commitdiff \| tree
2021-02-09	Pascal Merz	Make temperature and pressure coupling enums enum classes	commit \| commitdiff \| tree
2021-02-08	Andrey Alekseenko	Disable FPE for SYCL builds	commit \| commitdiff \| tree
2021-02-05	Mark Abraham	Remove VMX SIMD	commit \| commitdiff \| tree
2021-02-02	Andrey Alekseenko	Remove deprecated env. vars GMX_OCL_NB_ANA_EWALD etc	commit \| commitdiff \| tree
2021-02-02	Szilárd Páll	Improve DLB recommendation	commit \| commitdiff \| tree
2021-02-02	Artem Zhmurov	Use make_unique instead of reset when private implementation...	commit \| commitdiff \| tree
2021-01-28	Paul Bauer	Fix NB-LIB copyright	commit \| commitdiff \| tree
2021-01-27	Andrey Alekseenko	SYCL: fix typo in a test and clean-up non-standard...	commit \| commitdiff \| tree
2021-01-25	Andrey Alekseenko	Update self-documentation in admin/git-pre-commit	commit \| commitdiff \| tree
2021-01-11	Mark Abraham	Remove mdrun-only build configuration	commit \| commitdiff \| tree
2021-01-09	Andrey Alekseenko	densityfit: Fix typo in use of iterators	commit \| commitdiff \| tree
2021-01-07	Paul Bauer	Write copyright output files as utf8	commit \| commitdiff \| tree
2021-01-06	Pascal Merz	Remove misleading const qualifier for inputrec in expanded...	commit \| commitdiff \| tree
2021-01-06	Pascal Merz	Fix lambda printing const qualifier	commit \| commitdiff \| tree
2020-12-17	Mark Abraham	Update CI image to OneAPI 2021.1.1, add ICC tests.	commit \| commitdiff \| tree
2020-12-11	Andrey Alekseenko	Update instructions in containers.rst	commit \| commitdiff \| tree
2020-11-11	Szilárd Páll	Fix gcc 9 "warning: ‘unused’ attribute ignored"	commit \| commitdiff \| tree
2020-11-10	Mark Abraham	Add move operations to GpuHaloExchange	commit \| commitdiff \| tree
2020-11-06	Andrey Alekseenko	Suggest environment variable to limit visible SYCL...	commit \| commitdiff \| tree
2020-11-05	Andrey Alekseenko	Slightly refactor AmdZen1 detection code	commit \| commitdiff \| tree
2020-11-02	Andrey Alekseenko	Rework handling of PATH-like variables in GMXRC.bash/zsh	commit \| commitdiff \| tree
2020-10-29	Andrey Alekseenko	Narrow-down Intel-specific #ifdef's	commit \| commitdiff \| tree
2020-10-28	Andrey Alekseenko	Make dispatchTemplatedFunction compatible with MSVC	commit \| commitdiff \| tree
2020-10-26	M. Eric Irrgang	Tell gmxapi to look for MPI, when appropriate.	commit \| commitdiff \| tree
2020-10-24	Paul Bauer	Disallow OpenMP on Windows in CI	commit \| commitdiff \| tree
2020-10-24	Szilárd Páll	Exclude CUDA 10.2 as well from C++17 compilation	commit \| commitdiff \| tree
2020-10-22	Artem Zhmurov	Use and properly initialize PRNG when hardware random...	commit \| commitdiff \| tree
2020-10-21	Andrey Alekseenko	Revert "densityfit: Fix inconsistent use of iterators"	commit \| commitdiff \| tree
2020-10-21	Andrey Alekseenko	densityfit: Fix inconsistent use of iterators	commit \| commitdiff \| tree
2020-10-19	Andrey Alekseenko	Fix random doxygen warnings and typos	commit \| commitdiff \| tree
2020-10-14	Andrey Alekseenko	Add static constexpr members to naming style guide	commit \| commitdiff \| tree
2020-10-08	Andrey Alekseenko	NBlibTest/IntegratorWorks: Initialize x's and v's	commit \| commitdiff \| tree
2020-10-06	Paul Bauer	Set proper deviceVendor with SYCL	commit \| commitdiff \| tree
2020-10-02	Joe Jordan	Add tests for setStringEntry	commit \| commitdiff \| tree
2020-09-30	Andrey Alekseenko	Squash SYCL DeviceContext and DeviceStream	commit \| commitdiff \| tree
2020-09-30	Andrey Alekseenko	Fix Doxygen formula generation	commit \| commitdiff \| tree

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