BioD PNPI Git Repos - alexxy/gromacs.git/history

biod.pnpi.spb.ru / alexxy / gromacs.git / history

2013-04-29	Mark Abraham	Merge "Update linking to MKL and document same" into...	blob \| commitdiff \| raw
2013-04-26	Mark Abraham	Update linking to MKL and document same	blob \| commitdiff \| raw
2013-04-19	Teemu Murtola	Merge branch 'release-4-5-patches'	blob \| commitdiff \| raw \| diff to current
2013-04-13	David van der Spoel	Merge "added mdrun check for Verlet+perturbed atoms...	blob \| commitdiff \| raw \| diff to current
2013-03-26	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-03-12	Mark Abraham	Merge "fix broken things in mkhtml" into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-03-11	Mark Abraham	Merge "Fixes linkage with FFTW + MKL for BLAS/LAPACK...	blob \| commitdiff \| raw \| diff to current
2013-03-06	Roland Schulz	Merge "fixed PME time print with -ntomp_pme != -ntomp...	blob \| commitdiff \| raw \| diff to current
2013-03-05	Mark Abraham	New patch release 4.6.1	blob \| commitdiff \| raw \| diff to current
2013-03-05	Mark Abraham	Fix regressiontests automated download	blob \| commitdiff \| raw \| diff to current
2013-03-05	Mark Abraham	Warn if X11 was not found and the user wanted it	blob \| commitdiff \| raw \| diff to current
2013-02-20	Christoph Junghans	Bump shared object version to 8	blob \| commitdiff \| raw \| diff to current
2013-02-20	Mark Abraham	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-02-18	Roland Schulz	Issue errors/warnings for ICC before 12.0.0	blob \| commitdiff \| raw \| diff to current
2013-02-15	Mark Abraham	Bump shared object version to 7	blob \| commitdiff \| raw \| diff to current
2013-02-15	Mark Abraham	Merge "Unwinds flag dependencies in g_order." into...	blob \| commitdiff \| raw \| diff to current
2013-02-15	Mark Abraham	Merge "use legacy CUDA non-bonded kernels only on Fermi...	blob \| commitdiff \| raw \| diff to current
2013-02-13	Roland Schulz	Merge "improve setup of multiple tf tables" into releas...	blob \| commitdiff \| raw \| diff to current
2013-02-13	Roland Schulz	Merge "Updated FindGSL.cmake to version written by...	blob \| commitdiff \| raw \| diff to current
2013-02-12	Mark Abraham	Merge "PME-only counters are now reset with -maxh ...	blob \| commitdiff \| raw \| diff to current
2013-02-12	Christoph Junghans	Updated FindGSL.cmake to version written by me.	blob \| commitdiff \| raw \| diff to current
2013-02-08	Mark Abraham	Merge "added back cuda.h includes to fix missing CUDA_V...	blob \| commitdiff \| raw \| diff to current
2013-02-08	Mark Abraham	Merge "Fixed flop counting for generic cg/adress kernel...	blob \| commitdiff \| raw \| diff to current
2013-02-08	Mark Abraham	Merge "cmake: fixed typo in template CMakeLists.txt...	blob \| commitdiff \| raw \| diff to current
2013-02-05	Christoph Junghans	Merge "Documented what GMX_CPU_ACCELERATION really...	blob \| commitdiff \| raw \| diff to current
2013-02-05	Mark Abraham	Documented what GMX_CPU_ACCELERATION really means	blob \| commitdiff \| raw \| diff to current
2013-01-25	Christoph Junghans	Merge "Moved a few comments back into position" into...	blob \| commitdiff \| raw \| diff to current
2013-01-22	Mark Abraham	Merge "Illegal acceleration defaulted to QPX" into...	blob \| commitdiff \| raw \| diff to current
2013-01-22	Mark Abraham	Merge "Re-licenced FindGROMACS.cmake (was written by...	blob \| commitdiff \| raw \| diff to current
2013-01-22	Roland Schulz	Illegal acceleration defaulted to QPX	blob \| commitdiff \| raw \| diff to current
2013-01-22	Mark Abraham	Merge "Fix TOUPPER usage" into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-22	Mark Abraham	Merge "added missing cleanup of some nbnxn_cuda data...	blob \| commitdiff \| raw \| diff to current
2013-01-22	Roland Schulz	Fix TOUPPER usage	blob \| commitdiff \| raw \| diff to current
2013-01-21	Christoph Junghans	Merge "Set version info for 4.6.x release series" into...	blob \| commitdiff \| raw \| diff to current
2013-01-19	Roland Schulz	Release 4.5.6	blob \| commitdiff \| raw \| diff to current
2013-01-18	Mark Abraham	Set version info for 4.6.x release series	blob \| commitdiff \| raw \| diff to current
2013-01-18	Mark Abraham	New major release: 4.6	blob \| commitdiff \| raw \| diff to current
2013-01-18	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-18	Mark Abraham	Fixing copyright issues and code contributors	blob \| commitdiff \| raw \| diff to current
2013-01-18	Erik Lindahl	Merge "remove unnecessary cmake messages" into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-18	Erik Lindahl	Merge "fix OpenMP detection on Mac OS broken by a6fee0b...	blob \| commitdiff \| raw \| diff to current
2013-01-18	Szilárd Páll	fix OpenMP detection on Mac OS broken by a6fee0b	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Merge "Remove unnecessary ICC flags affecting performan...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Merge "improved CUDA kernel performance by pre-loading...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Christoph Junghans	Merge "Added note about make_edi and flooding in ED...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Christoph Junghans	Merge "use the compiler version provided by CMake ...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Szilárd Páll	Merge changes I930b316c,Iea4283e0,I103648f8 into releas...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Merge branch 'release-4-5-patches' into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-17	Roland Schulz	Merge "clarify wording of GPU driver-related notes...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Roland Schulz	Run regressiontests from build	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Finally move OpenMM to contrib	blob \| commitdiff \| raw \| diff to current
2013-01-16	Christoph Junghans	Remove debug statment	blob \| commitdiff \| raw \| diff to current
2013-01-15	Roland Schulz	Fix missing replacement/typo	blob \| commitdiff \| raw \| diff to current
2013-01-15	Mark Abraham	Merge "Hid nbnxn kernel names behind a lookup function...	blob \| commitdiff \| raw \| diff to current
2013-01-15	Christoph Junghans	Merge "disable OpenMP with all OS X gcc 4.2-based compi...	blob \| commitdiff \| raw \| diff to current
2013-01-15	Sander Pronk	Merge "Continuation of documentation for expanded ensem...	blob \| commitdiff \| raw \| diff to current
2013-01-15	Szilárd Páll	disable OpenMP with all OS X gcc 4.2-based compilers	blob \| commitdiff \| raw \| diff to current
2013-01-13	Christoph Junghans	Merge "Remove unused bfunc.h." into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-13	Christoph Junghans	Merge "Clarified some comments & warnings about thread...	blob \| commitdiff \| raw \| diff to current
2013-01-13	Christoph Junghans	Merge "Manage BlueGene/Q configuration" into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-13	Christoph Junghans	Merge "Changed defaults for building shared libraries...	blob \| commitdiff \| raw \| diff to current
2013-01-13	Mark Abraham	Manage BlueGene/Q configuration	blob \| commitdiff \| raw \| diff to current
2013-01-13	Mark Abraham	Changed defaults for building shared libraries	blob \| commitdiff \| raw \| diff to current
2013-01-11	Christoph Junghans	Merge "Fix CUDA being quiet and mark all CUDA_* as...	blob \| commitdiff \| raw \| diff to current
2013-01-11	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-11	Erik Lindahl	Merge "fixed nbnxn no LJ comb.rule AVX256 PME kernel...	blob \| commitdiff \| raw \| diff to current
2013-01-11	Roland Schulz	Merge "Handle compiler flags more flexibly" into releas...	blob \| commitdiff \| raw \| diff to current
2013-01-10	Mark Abraham	Merge "Revert default rlist/rvdw/rcoulomb to valid...	blob \| commitdiff \| raw \| diff to current
2013-01-10	Mark Abraham	Merge "fixed bug with Verlet + DD + bonded atom communi...	blob \| commitdiff \| raw \| diff to current
2013-01-10	Roland Schulz	Handle compiler flags more flexibly	blob \| commitdiff \| raw \| diff to current
2013-01-10	Erik Lindahl	Disallow the use of Clang to compile AVX_128_FMA	blob \| commitdiff \| raw \| diff to current
2013-01-10	Roland Schulz	Merge "Move Windows shared/static options to later...	blob \| commitdiff \| raw \| diff to current
2013-01-10	Roland Schulz	Merge "Remove workaround" into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-10	Roland Schulz	Move Windows shared/static options to later point	blob \| commitdiff \| raw \| diff to current
2013-01-10	Roland Schulz	Remove workaround	blob \| commitdiff \| raw \| diff to current
2013-01-10	Mark Abraham	Merge "Fixes SSE/AVX compilation under Windows" into...	blob \| commitdiff \| raw \| diff to current
2013-01-10	Erik Lindahl	Fixes SSE/AVX compilation under Windows	blob \| commitdiff \| raw \| diff to current
2013-01-09	Erik Lindahl	Merge "Corrected gmxcheck output for Gromos96 bonds...	blob \| commitdiff \| raw \| diff to current
2013-01-09	Roland Schulz	Merge "Added work-around for gcc bug in AVX intrinsincs...	blob \| commitdiff \| raw \| diff to current
2013-01-09	Roland Schulz	Merge "[tools] g_sans - add trajectory avereging" into...	blob \| commitdiff \| raw \| diff to current
2013-01-09	Erik Lindahl	Added work-around for gcc bug in AVX intrinsincs formal...	blob \| commitdiff \| raw \| diff to current
2013-01-08	Roland Schulz	Merge "Reduce use of monolithic sets of compiler flags...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "fixed nbnxn AVX-256 Ewald table pointer alignmen...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Mark Abraham	Reduce use of monolithic sets of compiler flags	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "cmake: remove double-negative quotes logic"...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "Print out atom numbers in g_rmsf" into release...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "Ignore bool cast warning for MSVC and C++" into...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Christoph Junghans	cmake: remove double-negative quotes logic	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "improved reporting of failed affinity setting...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "Fixed format error in online manual." into relea...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "Fixed a bug that with multiple exchanges" into...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "Essential dynamics: fixed restarts when ED group...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Roland Schulz	Merge "minor speed-up and code clean-up in nbnxn kernel...	blob \| commitdiff \| raw \| diff to current
2013-01-07	Christoph Junghans	Merge "Make gmx_cpuid.h self-standing." into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-04	Teemu Murtola	Merge "Minor fixes to g_angle help description." into...	blob \| commitdiff \| raw \| diff to current
2013-01-04	Mark Abraham	Set CMake module search path at a better time	blob \| commitdiff \| raw \| diff to current
2013-01-04	Teemu Murtola	Merge "Add missing defines to PKG_CFLAGS" into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-04	Teemu Murtola	Merge "Fixed error message for zwitterion residues...	blob \| commitdiff \| raw \| diff to current
2013-01-03	Christoph Junghans	Add missing defines to PKG_CFLAGS	blob \| commitdiff \| raw \| diff to current
2013-01-03	Roland Schulz	Merge "Fixed GMXRC so we are not polluting standard...	blob \| commitdiff \| raw \| diff to current
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