From: Anatoly <Titov_AI@pnpi.nrcki.ru>
Date: Tue, 28 Jul 2020 13:31:53 +0000 (+0300)
Subject: - added some template basis for future tests
X-Git-Url: http://biod.pnpi.spb.ru/gitweb/?a=commitdiff_plain;h=a889543452c91a01e7d9be576e2381501980641a;p=alexxy%2Fgromacs-spacetimecorr.git

- added some template basis for future tests
---

diff --git a/src/spacetimecorrtests.cpp b/src/spacetimecorrtests.cpp
index 21a05d5..c50c306 100644
--- a/src/spacetimecorrtests.cpp
+++ b/src/spacetimecorrtests.cpp
@@ -10,6 +10,33 @@
 #include "newfit.h"
 #include "corrtype.h"
 
+TEST( corrTests, corrTests_trajectoryPartition )
+{
+    correlationType testCorrs;
+    std::vector< RVec >                                         testReference;
+    testReference.resize(0);
+    std::vector< std::vector < std::vector < unsigned int > > > testSels;
+    testSels.resize(0);
+    std::vector< int >                                          testIndex;
+    testIndex.resize(0);
+    RVec                                                        a; a[0] = 1; a[1] = 2; a[2] = 3;
+
+    testSels.resize(1);
+    testSels[0].resize(1);
+    testSels[0][0].resize(0);
+    for (unsigned int i = 0; i < 100; i++) {
+        testReference.push_back(a);
+        testSels[0][0].push_back(i);
+        testIndex.push_back(i);
+    }
+    testCorrs.reference = testReference;
+    testCorrs.selections = testSels;
+    testCorrs.index = testIndex;
+
+    testCorrs.trajectoryPartition();
+    // по аналогии проверить различные варианты дробления молекулы
+}
+
 TEST( corrTests, corrTests_setDefaults )
 {
     std::vector< std::string >                                  testResNms;
@@ -18,6 +45,8 @@ TEST( corrTests, corrTests_setDefaults )
     testReference.resize(0);
     std::vector< std::vector < std::vector < unsigned int > > > testSels;
     testSels.resize(0);
+    std::vector< int >                                          testIndex;
+    testIndex.resize(0);
 
     int                                                         testTau_jump            = 100;
     int                                                         testWindow              = 1000;
@@ -27,8 +56,7 @@ TEST( corrTests, corrTests_setDefaults )
     std::string                                                 testOutPutName          = "testString";
     RVec                                                        a; a[0] = 1; a[1] = 2; a[2] = 3;
     correlationType                                             testCorrs;
-    std::vector< int >                                          testIndex;
-    testIndex.resize(0);
+
 
     testSels.resize(1);
     testSels[0].resize(1);
@@ -59,28 +87,55 @@ TEST( corrTests, corrTests_setDefaults )
     }
 }
 
-TEST( corrTests, corrTests_trajectoryPartition )
-{
-    // разбиение молекулы на куски исходя из доменов и распределение невошедшей части к доменам
-}
-
 TEST( corrTests, corrTests_correlationEval )
 {
+    std::vector< std::vector< RVec > > testTraj;
+    testTraj.resize(0);
+    RVec testA;
+    for (unsigned int i0 = 0; i0 < 1000; i0++) {
+        testTraj.resize(testTraj.size() + 1);
+        for (unsigned int i1 = 0; i1 < 10; i1++) {
+            testA[0] = std::sin(i0 * 2 * M_PI / 1000);
+            testA[1] = std::sin(i0 * 2 * M_PI / 1000);
+            testA[2] = std::sin(i0 * 2 * M_PI / 1000);
+            testTraj.back().push_back(testA);
+        }
+    }
     // вычисление корреляционных матриц на основе траектории
 }
 
 TEST( corrTests, corrTests_graphCalculations )
 {
+    std::vector< std::vector< std::vector< double > > >                                     matrixes;
+    std::vector< std::vector< std::pair< double, int > > >                                  graph;
+    std::vector< std::vector< unsigned int > >                                              subGraphPoints;
+    std::vector< std::vector< std::pair< unsigned int, unsigned int > > >                   subGraphRbr;
+    std::vector< int >                                                                      index;
+    std::vector< RVec >                                                                     reference;
+
+
+
     // создание графа на основе посчитанных матриц
 }
 
 TEST( corrTests, corrTests_graphBackBoneEvaluation )
 {
+    std::vector< int >                                                                      index;
+    std::vector< std::vector< std::pair< double, int > > >                                  graph;
+    std::vector< std::vector< unsigned int > >                                              subGraphPoints;
+    std::vector< std::vector< std::pair< unsigned int, unsigned int > > >                   subGraphRbr;
+    std::vector< std::vector< std::vector< std::pair< unsigned int, unsigned int > > > >    subGraphRouts;
+
+
+
+
     // выделение остовного(?) графа на базе полного графа
 }
 
 TEST( corrTests, corrTests_update )
 {
+    // инициализация
+    // траектория
     // основная работа программы целиком
 }