From: Szilard Pall <pszilard@cbr.su.se>
Date: Thu, 12 Apr 2012 15:13:59 +0000 (+0200)
Subject: enable command line option cheking in mdrun
X-Git-Url: http://biod.pnpi.spb.ru/gitweb/?a=commitdiff_plain;h=5a784fffabd82edfa3f71375150ee82e73352174;p=alexxy%2Fgromacs.git

enable command line option cheking in mdrun

Command line option checking has been disabled in mdrun. This can cause
unexpected issues e.g. when mdrun disregards an option with a typo.

Note that a few tools (g_tune_pme, g_pme_error, and g_membed) also omit
option checking, but these either rely on this "feature" or are in process
of rewriting/fixing for 4.6 which will implement the checkin. refs #922

Change-Id: I855c2dc0f2ebb09edfce92eb4a7b63fa144a5f4d
---

diff --git a/src/kernel/mdrun.c b/src/kernel/mdrun.c
index 012a330c92..81b8a4ee3f 100644
--- a/src/kernel/mdrun.c
+++ b/src/kernel/mdrun.c
@@ -518,10 +518,8 @@ int main(int argc,char *argv[])
   if (MASTER(cr))
     CopyRight(stderr, argv[0]);
 
-  PCA_Flags = (PCA_KEEP_ARGS | PCA_NOEXIT_ON_ARGS | PCA_CAN_SET_DEFFNM
-	       | (MASTER(cr) ? 0 : PCA_QUIET));
+  PCA_Flags = (PCA_CAN_SET_DEFFNM | (MASTER(cr) ? 0 : PCA_QUIET));
   
-
   /* Comment this in to do fexist calls only on master
    * works not with rerun or tables at the moment
    * also comment out the version of init_forcerec in md.c