options->addOption(gmx::SelectionOption("sel")
.storeVector(&sel_)
.required().dynamicMask().multiValue()
- .description("select residue and domains to form a rigid skeleton / -sf"));
+ .description("select pepride and colors / -sf"));
// Add option for output file name
- options->addOption(gmx::FileNameOption("dat").filetype(gmx::eftOptionFileType_NR).inputFile()
+ options->addOption(gmx::FileNameOption("dat").filetype(gmx::eftGenericData).inputFile()
.store(&fnBetaListsDat).description("a file to make dynamic beta lists"));
// Add option for output file name
- options->addOption(gmx::FileNameOption("out").filetype(gmx::eftOptionFileType_NR).outputFile()
+ options->addOption(gmx::FileNameOption("out").filetype(gmx::eftGenericData).outputFile()
.store(&fnOut).defaultBasename("colorAngles")
.description("Index file for the algorithm output."));
// Add option for effRad constant