\end{enumerate}
Or, as a sequence of commands to execute:
\begin{verbatim}
-tar xfz gromacs-4.6.tar.gz
-cd gromacs-4.6
+tar xfz gromacs-4.6.1.tar.gz
+cd gromacs-4.6.1
mkdir build
cd build
cmake .. -DGMX_BUILD_OWN_FFTW=ON
acceleration available for implicit solvent simulations in
\gromacs{} at the moment. However, the long-term plan is to enable
this functionality in core Gromacs, and not have the OpenMM
-interface supported by the \gromacs team. RIght now there might be
-some build issues for OpenMM, but they should be fixed by release 4.6.1.
+interface supported by the \gromacs team. Right now there are
+some build issues for OpenMM.
If you wish to run in parallel on multiple machines across a network,
you will need to have
example, download the source tarball and use
% TODO: keep up to date with new releases!
\begin{verbatim}
-$ tar xfz gromacs-4.6.tgz
-$ cd gromacs-4.6
+$ tar xfz gromacs-4.6.1.tgz
+$ cd gromacs-4.6.1
$ mkdir build-cmake
$ cd build-cmake
$ cmake ..
\verb+-DREGRESSIONTEST_DOWNLOAD+, and run \verb+make check+.
\gromacs{} will automatically download and run the tests for you.
Alternatively, you can download and unpack the tarball yourself from
-\url{http://gerrit.gromacs.org/download/regressiontests-4.6.tar.gz},
+\url{http://gerrit.gromacs.org/download/regressiontests-4.6.1.tar.gz},
and use the advanced \cmake{} option \verb+REGRESSIONTEST_PATH+ to
specify the path to the unpacked tarball, which will then be used for
testing. If this doesn't work, then please read on.
\subsubsection{BlueGene/P}
There is currently no native acceleration on this platform, but the
-default plain C kernels will work. Toolchain files will be improved in
-\gromacs{} 4.6.1.
+default plain C kernels will work.
\subsubsection{BlueGene/Q}
This is the architecture of the K computer, which uses Fujitsu Sparc64viiifx
chips. Gromacs-4.6 will build with default C kernels on this architecture,
-and Gromacs-4.6.1 will add accelerated kernels and a custom toolchain.
+and Gromacs-4.6.2 will add accelerated kernels and a custom toolchain.
\section{Tested platforms}