asdsadas

diff --git a/src/dssptools.cpp b/src/dssptools.cpp
index 80548472cb1767d7b76b45da07811e49b048f3ff..272bb7d98bbdeb0ba9ddbe1ca0ae3a62da2a60cf 100644 (file)
--- a/src/dssptools.cpp
+++ b/src/dssptools.cpp
@@ -260,9 +260,9 @@ void secondaryStructures::analyzeBridgesAndLaddersPatterns(){
 
 void secondaryStructures::analyzeTurnsAndHelicesPatterns(){
     for(const turnsTypes &i : { turnsTypes::Turn_4, turnsTypes::Turn_3, turnsTypes::Turn_5 }){
-        for(std::size_t j {0}; j + (static_cast<std::size_t>(i)) < SecondaryStructuresStatusMap.size(); ++j){
-            if ( hasHBondBetween(j, j + (static_cast<std::size_t>(i))) && NoChainBreaksBetween(j, j + (static_cast<std::size_t>(i))) ){
-                SecondaryStructuresStatusMap[j + (static_cast<std::size_t>(i))].setStatus(HelixPositions::End, i);
+        for(std::size_t j {0}; j + static_cast<std::size_t>(i) < SecondaryStructuresStatusMap.size(); ++j){
+            if ( hasHBondBetween(j, j + (static_cast<std::size_t>(i))) && NoChainBreaksBetween(j, j + static_cast<std::size_t>(i)) ){
+                SecondaryStructuresStatusMap[j + static_cast<std::size_t>(i)].setStatus(HelixPositions::End, i);
 
                 for (std::size_t k {1}; k < (static_cast<std::size_t>(i)); ++k){
                     if( SecondaryStructuresStatusMap[j + k].getStatus(i) == HelixPositions::None ){
@@ -338,9 +338,9 @@ void secondaryStructures::analyzePPHelicesPatterns(){}
 
 std::string secondaryStructures::patternSearch(){
 
-    analyzeBridgesAndLaddersPatterns();
+//    analyzeBridgesAndLaddersPatterns();
     analyzeTurnsAndHelicesPatterns();
-    analyzePPHelicesPatterns();
+//    analyzePPHelicesPatterns();
 
 //    for(std::size_t i {0}; i < ResInfoMap->size(); ++i){
 //        std::cout << (*ResInfoMap)[i].info->nr << " " << *((*ResInfoMap)[i].info->name) << std::endl;