Removed dihedrals from GLY .rtp entry.

This is the only FF file that uses these dihedrals for GLY,
which prevent the generation of a topology involving GLY-PRO
because of the assumption that +H exists. Removing all explicit
[dihedrals] to conform to the same format as all other AMBER FF.

Change-Id: Iccce7d7d8351390ebea717f161e17a4179e15077

diff --git a/share/top/amber03.ff/aminoacids.rtp b/share/top/amber03.ff/aminoacids.rtp
index da49d9b10fd7baa1632787447822d42559729ce2..0c36f000cc12d8e323be7f338f88c38d8b9f4406 100644 (file)
--- a/share/top/amber03.ff/aminoacids.rtp
+++ b/share/top/amber03.ff/aminoacids.rtp
@@ -213,16 +213,6 @@
     CA     C
      C     O
     -C     N
- [ dihedrals ]
-    CA     C    +N    +H    
-     O     C    +N    +H    
-    -C     N    CA     C    
-    CA     C    +N   +CA    
-     O     C    +N   +CA    
-    -C     N    CA   HA1    
-    -C     N    CA   HA2    
-   HA1    CA     C    +N    
-   HA2    CA     C    +N    
  [ impropers ]
     -C    CA     N     H
     CA    +N     C     O