added circles output

diff --git a/src/spirals.cpp b/src/spirals.cpp
index be2471e05ec8bba18d82909951e8b026e7817474..38c95d0efc94a1051ff33eeed3a2187356c20467 100644 (file)
--- a/src/spirals.cpp
+++ b/src/spirals.cpp
@@ -386,23 +386,27 @@ Spirals::finishAnalysis(int /*nframes*/)
         for (int j = 0; j < monomers[i].size(); j++) {
             std::fprintf(file, "%3.2f %3.2f %3.2f\n", monomers[i][j][0], monomers[i][j][1], monomers[i][j][2]);
         }
+        std::fprintf(file, "\n");
         for (int j = 0; j < kernel[i].krnl.size(); j++) {
             std::fprintf(file, "%3.2f %3.2f %3.2f\n", kernel[i].krnl[j][0], kernel[i].krnl[j][1], kernel[i].krnl[j][2]);
         }
-        std::fprintf(file, "\n");
+        std::fprintf(file, "\n\n");
     }
     std::fclose(file);
 
 
 
-    /*file = std::fopen("spiral_dist.txt", "w+");
-    for (int i = 0; i < spiral_dist.size(); i++) {
-        for (int j = 0; j < spiral_dist[i].size(); j++) {
-            std::fprintf(file, "%3.2Lf\n", spiral_dist[i][j]);
+    file = std::fopen("circles_points.txt", "w+");
+    for (int i = 0; i < circles.size(); i++) {
+        for (int j = 0; j < circles[i].size(); j++) {
+            for (int k = 0; k < circles[i][j].size(); k++) {
+                std::fprintf(file, "%3.2f ", circles[i][j][k]);
+            }
+            std::fprintf(file, "\n");
         }
         std::fprintf(file, "\n");
     }
-    std::fclose(file);*/
+    std::fclose(file);
 }
 
 void