Changes to enable Amber99
authorErik Lindahl <lindahl@cbr.su.se>
Wed, 21 Jul 2010 20:44:55 +0000 (22:44 +0200)
committerErik Lindahl <lindahl@cbr.su.se>
Wed, 21 Jul 2010 20:44:55 +0000 (22:44 +0200)
commitc96fb795221b524ff9a9a427b484d3c2a7531206
treeffa7c1a39dc422e176c41e17d1c5379ac7761af6
parentf9885d8cb3b2f22e92231bcda279547bebe18105
Changes to enable Amber99
44 files changed:
share/top/amber99.ff/#gbsa.itp# [new file with mode: 0644]
share/top/amber99.ff/.#gbsa.itp [new symlink]
share/top/amber99.ff/Makefile.am [new file with mode: 0644]
share/top/amber99.ff/aminoacids.arn [new file with mode: 0644]
share/top/amber99.ff/aminoacids.bak [new file with mode: 0644]
share/top/amber99.ff/aminoacids.c.tdb [new file with mode: 0644]
share/top/amber99.ff/aminoacids.hdb [new file with mode: 0644]
share/top/amber99.ff/aminoacids.n.tdb [new file with mode: 0644]
share/top/amber99.ff/aminoacids.r2b [new file with mode: 0644]
share/top/amber99.ff/aminoacids.rtp [new file with mode: 0644]
share/top/amber99.ff/aminoacids.vsd [new file with mode: 0644]
share/top/amber99.ff/atomtypes.atp [new file with mode: 0644]
share/top/amber99.ff/dna.hdb [new file with mode: 0644]
share/top/amber99.ff/dna.r2b [new file with mode: 0644]
share/top/amber99.ff/dna.rtp [new file with mode: 0644]
share/top/amber99.ff/ffbon.itp [new file with mode: 0644]
share/top/amber99.ff/ffnb.itp [new file with mode: 0644]
share/top/amber99.ff/forcefield.doc [new file with mode: 0644]
share/top/amber99.ff/forcefield.itp [new file with mode: 0644]
share/top/amber99.ff/gbsa.itp [new file with mode: 0644]
share/top/amber99.ff/ions.itp [new file with mode: 0644]
share/top/amber99.ff/out1 [new file with mode: 0644]
share/top/amber99.ff/outx [new file with mode: 0644]
share/top/amber99.ff/rna.hdb [new file with mode: 0644]
share/top/amber99.ff/rna.r2b [new file with mode: 0644]
share/top/amber99.ff/rna.rtp [new file with mode: 0644]
share/top/amber99.ff/tip3p.itp [new file with mode: 0644]
share/top/amber99.ff/tip4p.itp [new file with mode: 0644]
share/top/amber99.ff/tip4pEW.itp [new file with mode: 0644]
share/top/amber99.ff/tip5p.itp [new file with mode: 0644]
share/top/amber99.ff/tmp1 [new file with mode: 0644]
share/top/amber99.ff/tmp2 [new file with mode: 0644]
share/top/amber99.ff/urea.itp [new file with mode: 0644]
share/top/amber99.ff/watermodels.dat [new file with mode: 0644]
share/top/aminoacids.dat
share/top/charmm27.ff/aminoacids.arn
share/top/charmm27.ff/aminoacids.r2b
share/top/oplsaa.ff/aminoacids.r2b
share/top/oplsaa.ff/aminoacids.rtp
src/gmxlib/bondfree.c
src/kernel/convparm.c
src/kernel/gen_vsite.c
src/kernel/pdb2gmx.c
src/kernel/toppush.c