BioD PNPI Git Repos - alexxy/gromacs.git/commit

biod.pnpi.spb.ru / alexxy / gromacs.git / commit

author	lindahl <lindahl>
	Fri, 10 Oct 2008 04:37:33 +0000 (04:37 +0000)
committer	lindahl <lindahl>
	Fri, 10 Oct 2008 04:37:33 +0000 (04:37 +0000)
commit	7c2cdfb48c4c57b9519ec065b156329680511f4f
tree	1a1d846ca3f12690cff5e139713b964c444dea79	tree \| snapshot
parent	f24eb7316ffcf8e118f07bea4eb678061acbff59	commit \| diff

Merged in changes from final 4.0 release into head branch.

261 files changed:

acinclude.m4		diff \| blob \| history
admin/gromacs-mpi.spec		diff \| blob \| history
admin/gromacs.spec		diff \| blob \| history
admin/mkhtml		diff \| blob \| history
admin/mktex		diff \| blob \| history
admin/programs.txt		diff \| blob \| history
config/config.guess		diff \| blob \| history
config/config.sub		diff \| blob \| history
config/ltmain.sh		diff \| blob \| history
configure.ac		diff \| blob \| history
include/gmx_ana.h		diff \| blob \| history
include/gmx_arpack.h		diff \| blob \| history
include/gmx_blas.h		diff \| blob \| history
include/gmx_lapack.h		diff \| blob \| history
include/gmx_random.h		diff \| blob \| history
include/gmx_wallcycle.h		diff \| blob \| history
include/mpelogging.h		diff \| blob \| history
include/perf_est.h		diff \| blob \| history
include/qmmm.h		diff \| blob \| history
include/shellfc.h		diff \| blob \| history
include/tpxio.h		diff \| blob \| history
include/types/ns.h		diff \| blob \| history
include/types/qmmmrec.h		diff \| blob \| history
include/vec.h		diff \| blob \| history
man/man1/Makefile.am		diff \| blob \| history
man/man1/anadock.1		diff \| blob \| history
man/man1/do_dssp.1		diff \| blob \| history
man/man1/editconf.1		diff \| blob \| history
man/man1/eneconv.1		diff \| blob \| history
man/man1/g_anaeig.1		diff \| blob \| history
man/man1/g_analyze.1		diff \| blob \| history
man/man1/g_angle.1		diff \| blob \| history
man/man1/g_bond.1		diff \| blob \| history
man/man1/g_bundle.1		diff \| blob \| history
man/man1/g_chi.1		diff \| blob \| history
man/man1/g_cluster.1		diff \| blob \| history
man/man1/g_clustsize.1		diff \| blob \| history
man/man1/g_confrms.1		diff \| blob \| history
man/man1/g_covar.1		diff \| blob \| history
man/man1/g_current.1	[new file with mode: 0644]	blob
man/man1/g_density.1		diff \| blob \| history
man/man1/g_densmap.1		diff \| blob \| history
man/man1/g_dielectric.1		diff \| blob \| history
man/man1/g_dih.1		diff \| blob \| history
man/man1/g_dipoles.1		diff \| blob \| history
man/man1/g_disre.1		diff \| blob \| history
man/man1/g_dist.1		diff \| blob \| history
man/man1/g_dyndom.1		diff \| blob \| history
man/man1/g_enemat.1		diff \| blob \| history
man/man1/g_energy.1		diff \| blob \| history
man/man1/g_filter.1		diff \| blob \| history
man/man1/g_gyrate.1		diff \| blob \| history
man/man1/g_h2order.1		diff \| blob \| history
man/man1/g_hbond.1		diff \| blob \| history
man/man1/g_helix.1		diff \| blob \| history
man/man1/g_helixorient.1	[new file with mode: 0644]	blob
man/man1/g_lie.1		diff \| blob \| history
man/man1/g_mdmat.1		diff \| blob \| history
man/man1/g_mindist.1		diff \| blob \| history
man/man1/g_morph.1		diff \| blob \| history
man/man1/g_msd.1		diff \| blob \| history
man/man1/g_nmeig.1		diff \| blob \| history
man/man1/g_nmens.1		diff \| blob \| history
man/man1/g_nmtraj.1		diff \| blob \| history
man/man1/g_order.1		diff \| blob \| history
man/man1/g_polystat.1	[new file with mode: 0644]	blob
man/man1/g_potential.1		diff \| blob \| history
man/man1/g_principal.1	[new file with mode: 0644]	blob
man/man1/g_rama.1		diff \| blob \| history
man/man1/g_rdf.1		diff \| blob \| history
man/man1/g_rms.1		diff \| blob \| history
man/man1/g_rmsdist.1		diff \| blob \| history
man/man1/g_rmsf.1		diff \| blob \| history
man/man1/g_rotacf.1		diff \| blob \| history
man/man1/g_saltbr.1		diff \| blob \| history
man/man1/g_sas.1		diff \| blob \| history
man/man1/g_sdf.1	[new file with mode: 0644]	blob
man/man1/g_sgangle.1		diff \| blob \| history
man/man1/g_sham.1		diff \| blob \| history
man/man1/g_sorient.1		diff \| blob \| history
man/man1/g_spatial.1	[new file with mode: 0644]	blob
man/man1/g_spol.1	[new file with mode: 0644]	blob
man/man1/g_tcaf.1		diff \| blob \| history
man/man1/g_traj.1		diff \| blob \| history
man/man1/g_vanhove.1	[new file with mode: 0644]	blob
man/man1/g_velacc.1		diff \| blob \| history
man/man1/g_wham.1		diff \| blob \| history
man/man1/genbox.1		diff \| blob \| history
man/man1/genconf.1		diff \| blob \| history
man/man1/genion.1		diff \| blob \| history
man/man1/genrestr.1	[new file with mode: 0644]	blob
man/man1/gmxcheck.1		diff \| blob \| history
man/man1/gmxdump.1		diff \| blob \| history
man/man1/grompp.1		diff \| blob \| history
man/man1/highway.1		diff \| blob \| history
man/man1/make_edi.1		diff \| blob \| history
man/man1/make_ndx.1		diff \| blob \| history
man/man1/mdrun.1		diff \| blob \| history
man/man1/mk_angndx.1		diff \| blob \| history
man/man1/ngmx.1		diff \| blob \| history
man/man1/pdb2gmx.1		diff \| blob \| history
man/man1/protonate.1		diff \| blob \| history
man/man1/sigeps.1	[new file with mode: 0644]	blob
man/man1/tpbconv.1		diff \| blob \| history
man/man1/trjcat.1		diff \| blob \| history
man/man1/trjconv.1		diff \| blob \| history
man/man1/trjorder.1		diff \| blob \| history
man/man1/wheel.1		diff \| blob \| history
man/man1/x2top.1		diff \| blob \| history
man/man1/xpm2ps.1		diff \| blob \| history
man/man1/xrama.1		diff \| blob \| history
share/html/gmxfaq.html		diff \| blob \| history
share/html/online.html		diff \| blob \| history
share/html/online/cpt.html		diff \| blob \| history
share/html/online/dat.html		diff \| blob \| history
share/html/online/dlg.html		diff \| blob \| history
share/html/online/do_dssp.html		diff \| blob \| history
share/html/online/edi.html		diff \| blob \| history
share/html/online/editconf.html		diff \| blob \| history
share/html/online/edo.html		diff \| blob \| history
share/html/online/edr.html		diff \| blob \| history
share/html/online/ene.html		diff \| blob \| history
share/html/online/eneconv.html		diff \| blob \| history
share/html/online/eps.html		diff \| blob \| history
share/html/online/files.html		diff \| blob \| history
share/html/online/flow.html		diff \| blob \| history
share/html/online/g87.html		diff \| blob \| history
share/html/online/g96.html		diff \| blob \| history
share/html/online/g_anaeig.html		diff \| blob \| history
share/html/online/g_analyze.html		diff \| blob \| history
share/html/online/g_angle.html		diff \| blob \| history
share/html/online/g_bond.html		diff \| blob \| history
share/html/online/g_bundle.html		diff \| blob \| history
share/html/online/g_chi.html		diff \| blob \| history
share/html/online/g_cluster.html		diff \| blob \| history
share/html/online/g_confrms.html		diff \| blob \| history
share/html/online/g_covar.html		diff \| blob \| history
share/html/online/g_density.html		diff \| blob \| history
share/html/online/g_densmap.html		diff \| blob \| history
share/html/online/g_dielectric.html		diff \| blob \| history
share/html/online/g_dih.html		diff \| blob \| history
share/html/online/g_dipoles.html		diff \| blob \| history
share/html/online/g_disre.html		diff \| blob \| history
share/html/online/g_dist.html		diff \| blob \| history
share/html/online/g_dyndom.html		diff \| blob \| history
share/html/online/g_enemat.html		diff \| blob \| history
share/html/online/g_energy.html		diff \| blob \| history
share/html/online/g_gyrate.html		diff \| blob \| history
share/html/online/g_h2order.html		diff \| blob \| history
share/html/online/g_hbond.html		diff \| blob \| history
share/html/online/g_helix.html		diff \| blob \| history
share/html/online/g_lie.html		diff \| blob \| history
share/html/online/g_mdmat.html		diff \| blob \| history
share/html/online/g_mindist.html		diff \| blob \| history
share/html/online/g_morph.html		diff \| blob \| history
share/html/online/g_msd.html		diff \| blob \| history
share/html/online/g_nmeig.html		diff \| blob \| history
share/html/online/g_nmens.html		diff \| blob \| history
share/html/online/g_nmtraj.html		diff \| blob \| history
share/html/online/g_order.html		diff \| blob \| history
share/html/online/g_potential.html		diff \| blob \| history
share/html/online/g_rama.html		diff \| blob \| history
share/html/online/g_rdf.html		diff \| blob \| history
share/html/online/g_rms.html		diff \| blob \| history
share/html/online/g_rmsdist.html		diff \| blob \| history
share/html/online/g_rmsf.html		diff \| blob \| history
share/html/online/g_rotacf.html		diff \| blob \| history
share/html/online/g_saltbr.html		diff \| blob \| history
share/html/online/g_sas.html		diff \| blob \| history
share/html/online/g_sgangle.html		diff \| blob \| history
share/html/online/g_sham.html		diff \| blob \| history
share/html/online/g_sorient.html		diff \| blob \| history
share/html/online/g_tcaf.html		diff \| blob \| history
share/html/online/g_traj.html		diff \| blob \| history
share/html/online/g_velacc.html		diff \| blob \| history
share/html/online/genbox.html		diff \| blob \| history
share/html/online/genconf.html		diff \| blob \| history
share/html/online/genion.html		diff \| blob \| history
share/html/online/genpr.html		diff \| blob \| history
share/html/online/getting_started.html		diff \| blob \| history
share/html/online/gmxcheck.html		diff \| blob \| history
share/html/online/gmxdemo.html		diff \| blob \| history
share/html/online/gmxdump.html		diff \| blob \| history
share/html/online/gro.html		diff \| blob \| history
share/html/online/grompp.html		diff \| blob \| history
share/html/online/hat.html		diff \| blob \| history
share/html/online/highway.html		diff \| blob \| history
share/html/online/itp.html		diff \| blob \| history
share/html/online/log.html		diff \| blob \| history
share/html/online/m2p.html		diff \| blob \| history
share/html/online/make_edi.html		diff \| blob \| history
share/html/online/make_ndx.html		diff \| blob \| history
share/html/online/map.html		diff \| blob \| history
share/html/online/mdp.html		diff \| blob \| history
share/html/online/mdp_opt.html		diff \| blob \| history
share/html/online/mdrun.html		diff \| blob \| history
share/html/online/methanol.html		diff \| blob \| history
share/html/online/mixed.html		diff \| blob \| history
share/html/online/mk_angndx.html		diff \| blob \| history
share/html/online/mtx.html		diff \| blob \| history
share/html/online/ndx.html		diff \| blob \| history
share/html/online/ngmx.html		diff \| blob \| history
share/html/online/out.html		diff \| blob \| history
share/html/online/pdb.html		diff \| blob \| history
share/html/online/pdb2gmx.html		diff \| blob \| history
share/html/online/protonate.html		diff \| blob \| history
share/html/online/protunf.html		diff \| blob \| history
share/html/online/rtp.html		diff \| blob \| history
share/html/online/speptide.html		diff \| blob \| history
share/html/online/tex.html		diff \| blob \| history
share/html/online/top.html		diff \| blob \| history
share/html/online/tpa.html		diff \| blob \| history
share/html/online/tpb.html		diff \| blob \| history
share/html/online/tpbconv.html		diff \| blob \| history
share/html/online/tpr.html		diff \| blob \| history
share/html/online/trj.html		diff \| blob \| history
share/html/online/trjcat.html		diff \| blob \| history
share/html/online/trjconv.html		diff \| blob \| history
share/html/online/trjorder.html		diff \| blob \| history
share/html/online/trr.html		diff \| blob \| history
share/html/online/water.html		diff \| blob \| history
share/html/online/wheel.html		diff \| blob \| history
share/html/online/x2top.html		diff \| blob \| history
share/html/online/xpm.html		diff \| blob \| history
share/html/online/xpm2ps.html		diff \| blob \| history
share/html/online/xrama.html		diff \| blob \| history
share/html/online/xtc.html		diff \| blob \| history
share/html/online/xvg.html		diff \| blob \| history
share/html/online/yourown.html		diff \| blob \| history
share/template/Makefile.am		diff \| blob \| history
share/top/specbond.dat		diff \| blob \| history
src/gmxlib/confio.c		diff \| blob \| history
src/gmxlib/gmx_blas/Makefile.am		diff \| blob \| history
src/gmxlib/gmx_blas/blas_copyright	[new file with mode: 0644]	blob
src/gmxlib/gmx_lapack/Makefile.am		diff \| blob \| history
src/gmxlib/gmx_lapack/lapack_copyright	[new file with mode: 0644]	blob
src/gmxlib/libxdrf.c		diff \| blob \| history
src/gmxlib/mtop_util.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_free_energy.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_generic.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel/mknb_innerloop.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_ia64_double/ia64_cpuid.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_ia64_single/ia64_cpuid.h		diff \| blob \| history
src/gmxlib/pdbio.c		diff \| blob \| history
src/gmxlib/topsort.c		diff \| blob \| history
src/gmxlib/tpxio.c		diff \| blob \| history
src/kernel/convparm.c		diff \| blob \| history
src/kernel/gmxcpp.h		diff \| blob \| history
src/kernel/pdb2gmx.c		diff \| blob \| history
src/mdlib/gmx_fft_mkl.c		diff \| blob \| history
src/mdlib/gmx_wallcycle.c		diff \| blob \| history
src/mdlib/perf_est.c		diff \| blob \| history
src/mdlib/shellfc.c		diff \| blob \| history
src/mdlib/wall.c		diff \| blob \| history
src/tools/correl.c		diff \| blob \| history
src/tools/correl.h		diff \| blob \| history
src/tools/gmx_genpr.c		diff \| blob \| history
src/tools/gmx_principal.c		diff \| blob \| history
src/tools/gmx_rmsf.c		diff \| blob \| history
src/tools/gmx_sas.c		diff \| blob \| history
src/tools/nsc.c		diff \| blob \| history

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