BioD PNPI Git Repos - alexxy/gromacs.git/commit

biod.pnpi.spb.ru / alexxy / gromacs.git / commit

author	Teemu Murtola <teemu.murtola@cbr.su.se>
	Wed, 17 Nov 2010 19:42:53 +0000 (21:42 +0200)
committer	Teemu Murtola <teemu.murtola@cbr.su.se>
	Wed, 17 Nov 2010 19:42:53 +0000 (21:42 +0200)
commit	5786270463d521cb98f8aefeb7c97c241ff35301
tree	e092c8a8e5f701ab99672e6ec8001fc41f055165	tree \| snapshot
parent	1940cc6535cf6ca99db11f2b470eedfe1839384d	commit \| diff

Moved src/mdlib/ to src/gromacs/mdlib/.

All the files there now link into a libgromacs library.

88 files changed:

src/CMakeLists.txt		diff \| blob \| history
src/gromacs/CMakeLists.txt		diff \| blob \| history
src/gromacs/libgromacs.pc.cmakein	[new file with mode: 0644]	blob
src/gromacs/mdlib/CMakeLists.txt	[new file with mode: 0644]	blob
src/gromacs/mdlib/calcmu.c	[moved from src/mdlib/calcmu.c with 100% similarity]	blob \| history
src/gromacs/mdlib/calcvir.c	[moved from src/mdlib/calcvir.c with 100% similarity]	blob \| history
src/gromacs/mdlib/clincs.c	[moved from src/mdlib/clincs.c with 100% similarity]	blob \| history
src/gromacs/mdlib/constr.c	[moved from src/mdlib/constr.c with 100% similarity]	blob \| history
src/gromacs/mdlib/coupling.c	[moved from src/mdlib/coupling.c with 100% similarity]	blob \| history
src/gromacs/mdlib/csettle.c	[moved from src/mdlib/csettle.c with 100% similarity]	blob \| history
src/gromacs/mdlib/domdec.c	[moved from src/mdlib/domdec.c with 100% similarity]	blob \| history
src/gromacs/mdlib/domdec_box.c	[moved from src/mdlib/domdec_box.c with 100% similarity]	blob \| history
src/gromacs/mdlib/domdec_con.c	[moved from src/mdlib/domdec_con.c with 100% similarity]	blob \| history
src/gromacs/mdlib/domdec_network.c	[moved from src/mdlib/domdec_network.c with 100% similarity]	blob \| history
src/gromacs/mdlib/domdec_setup.c	[moved from src/mdlib/domdec_setup.c with 100% similarity]	blob \| history
src/gromacs/mdlib/domdec_top.c	[moved from src/mdlib/domdec_top.c with 100% similarity]	blob \| history
src/gromacs/mdlib/ebin.c	[moved from src/mdlib/ebin.c with 100% similarity]	blob \| history
src/gromacs/mdlib/edsam.c	[moved from src/mdlib/edsam.c with 100% similarity]	blob \| history
src/gromacs/mdlib/ewald.c	[moved from src/mdlib/ewald.c with 100% similarity]	blob \| history
src/gromacs/mdlib/fft5d.c	[moved from src/mdlib/fft5d.c with 100% similarity]	blob \| history
src/gromacs/mdlib/fft5d.h	[moved from src/mdlib/fft5d.h with 100% similarity]	blob \| history
src/gromacs/mdlib/force.c	[moved from src/mdlib/force.c with 100% similarity]	blob \| history
src/gromacs/mdlib/forcerec.c	[moved from src/mdlib/forcerec.c with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn.c	[moved from src/mdlib/genborn.c with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_allvsall.c	[moved from src/mdlib/genborn_allvsall.c with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_allvsall.h	[moved from src/mdlib/genborn_allvsall.h with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_allvsall_sse2_double.c	[moved from src/mdlib/genborn_allvsall_sse2_double.c with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_allvsall_sse2_double.h	[moved from src/mdlib/genborn_allvsall_sse2_double.h with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_allvsall_sse2_single.c	[moved from src/mdlib/genborn_allvsall_sse2_single.c with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_allvsall_sse2_single.h	[moved from src/mdlib/genborn_allvsall_sse2_single.h with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_sse2_double.c	[moved from src/mdlib/genborn_sse2_double.c with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_sse2_double.h	[moved from src/mdlib/genborn_sse2_double.h with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_sse2_single.c	[moved from src/mdlib/genborn_sse2_single.c with 100% similarity]	blob \| history
src/gromacs/mdlib/genborn_sse2_single.h	[moved from src/mdlib/genborn_sse2_single.h with 100% similarity]	blob \| history
src/gromacs/mdlib/ghat.c	[moved from src/mdlib/ghat.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_fft.c	[moved from src/mdlib/gmx_fft.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_fft_acml.c	[moved from src/mdlib/gmx_fft_acml.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_fft_fftpack.c	[moved from src/mdlib/gmx_fft_fftpack.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_fft_fftw2.c	[moved from src/mdlib/gmx_fft_fftw2.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_fft_fftw3.c	[moved from src/mdlib/gmx_fft_fftw3.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_fft_mkl.c	[moved from src/mdlib/gmx_fft_mkl.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_parallel_3dfft.c	[moved from src/mdlib/gmx_parallel_3dfft.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_qhop_db.h	[moved from src/mdlib/gmx_qhop_db.h with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_qhop_db_test.c	[moved from src/mdlib/gmx_qhop_db_test.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_qhop_parm.c	[moved from src/mdlib/gmx_qhop_parm.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_qhop_parm.h	[moved from src/mdlib/gmx_qhop_parm.h with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_qhop_xml.c	[moved from src/mdlib/gmx_qhop_xml.c with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_qhop_xml.h	[moved from src/mdlib/gmx_qhop_xml.h with 100% similarity]	blob \| history
src/gromacs/mdlib/gmx_wallcycle.c	[moved from src/mdlib/gmx_wallcycle.c with 100% similarity]	blob \| history
src/gromacs/mdlib/groupcoord.c	[moved from src/mdlib/groupcoord.c with 100% similarity]	blob \| history
src/gromacs/mdlib/groupcoord.h	[moved from src/mdlib/groupcoord.h with 100% similarity]	blob \| history
src/gromacs/mdlib/init.c	[moved from src/mdlib/init.c with 100% similarity]	blob \| history
src/gromacs/mdlib/mdatom.c	[moved from src/mdlib/mdatom.c with 100% similarity]	blob \| history
src/gromacs/mdlib/mdebin.c	[moved from src/mdlib/mdebin.c with 100% similarity]	blob \| history
src/gromacs/mdlib/mdebin_bar.c	[moved from src/mdlib/mdebin_bar.c with 100% similarity]	blob \| history
src/gromacs/mdlib/mdebin_bar.h	[moved from src/mdlib/mdebin_bar.h with 100% similarity]	blob \| history
src/gromacs/mdlib/minimize.c	[moved from src/mdlib/minimize.c with 100% similarity]	blob \| history
src/gromacs/mdlib/mvxvf.c	[moved from src/mdlib/mvxvf.c with 100% similarity]	blob \| history
src/gromacs/mdlib/ns.c	[moved from src/mdlib/ns.c with 100% similarity]	blob \| history
src/gromacs/mdlib/nsgrid.c	[moved from src/mdlib/nsgrid.c with 100% similarity]	blob \| history
src/gromacs/mdlib/partdec.c	[moved from src/mdlib/partdec.c with 100% similarity]	blob \| history
src/gromacs/mdlib/perf_est.c	[moved from src/mdlib/perf_est.c with 100% similarity]	blob \| history
src/gromacs/mdlib/pme.c	[moved from src/mdlib/pme.c with 100% similarity]	blob \| history
src/gromacs/mdlib/pme_pp.c	[moved from src/mdlib/pme_pp.c with 100% similarity]	blob \| history
src/gromacs/mdlib/pppm.c	[moved from src/mdlib/pppm.c with 100% similarity]	blob \| history
src/gromacs/mdlib/pull.c	[moved from src/mdlib/pull.c with 100% similarity]	blob \| history
src/gromacs/mdlib/pull_rotation.c	[moved from src/mdlib/pull_rotation.c with 100% similarity]	blob \| history
src/gromacs/mdlib/pullutil.c	[moved from src/mdlib/pullutil.c with 100% similarity]	blob \| history
src/gromacs/mdlib/qm_gamess.c	[moved from src/mdlib/qm_gamess.c with 100% similarity]	blob \| history
src/gromacs/mdlib/qm_gaussian.c	[moved from src/mdlib/qm_gaussian.c with 100% similarity]	blob \| history
src/gromacs/mdlib/qm_mopac.c	[moved from src/mdlib/qm_mopac.c with 100% similarity]	blob \| history
src/gromacs/mdlib/qm_orca.c	[moved from src/mdlib/qm_orca.c with 100% similarity]	blob \| history
src/gromacs/mdlib/qmmm.c	[moved from src/mdlib/qmmm.c with 100% similarity]	blob \| history
src/gromacs/mdlib/rf_util.c	[moved from src/mdlib/rf_util.c with 100% similarity]	blob \| history
src/gromacs/mdlib/shakef.c	[moved from src/mdlib/shakef.c with 100% similarity]	blob \| history
src/gromacs/mdlib/shellfc.c	[moved from src/mdlib/shellfc.c with 100% similarity]	blob \| history
src/gromacs/mdlib/sim_util.c	[moved from src/mdlib/sim_util.c with 100% similarity]	blob \| history
src/gromacs/mdlib/stat.c	[moved from src/mdlib/stat.c with 100% similarity]	blob \| history
src/gromacs/mdlib/tables.c	[moved from src/mdlib/tables.c with 100% similarity]	blob \| history
src/gromacs/mdlib/tgroup.c	[moved from src/mdlib/tgroup.c with 100% similarity]	blob \| history
src/gromacs/mdlib/tpi.c	[moved from src/mdlib/tpi.c with 100% similarity]	blob \| history
src/gromacs/mdlib/update.c	[moved from src/mdlib/update.c with 100% similarity]	blob \| history
src/gromacs/mdlib/vcm.c	[moved from src/mdlib/vcm.c with 100% similarity]	blob \| history
src/gromacs/mdlib/vsite.c	[moved from src/mdlib/vsite.c with 100% similarity]	blob \| history
src/gromacs/mdlib/wall.c	[moved from src/mdlib/wall.c with 100% similarity]	blob \| history
src/gromacs/mdlib/wnblist.c	[moved from src/mdlib/wnblist.c with 100% similarity]	blob \| history
src/kernel/CMakeLists.txt		diff \| blob \| history
src/tools/CMakeLists.txt		diff \| blob \| history

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