BioD PNPI Git Repos - alexxy/gromacs.git/commit

biod.pnpi.spb.ru / alexxy / gromacs.git / commit

author	Roland Schulz <roland@utk.edu>
	Fri, 18 Jan 2013 01:07:27 +0000 (20:07 -0500)
committer	Gerrit Code Review <gerrit@gerrit.gromacs.org>
	Fri, 18 Jan 2013 20:22:06 +0000 (21:22 +0100)
commit	3339ffd6be2736541b928446de39ce51293449c6
tree	4d42efa0c255d7e8b43fdb46992dd67f5215a4f0	tree \| snapshot
parent	66ff3d6e8bf65cce7b3008e65719e333da5e83e3	commit \| diff

Code beautification with uncrustify

We are going to try to keep our eyeballs from bleeding when we
read prehistoric code from this project while maintaining it.
So we need a point in time where release-4-6 gets beautiful
in tandem with master. That time is now.

At some point we hope to be able to do this automatically so
we can have reviewers concentrate on code quality and not
formatting trivia. But we have to do a whole-of-project
fix first.

Refs #845

Change-Id: I8e99228cc118f75c0831e8297c171fcbbabc8f73

894 files changed:

admin/uncrustify.cfg	[new file with mode: 0644]	blob
include/3dview.h		diff \| blob \| history
include/assert.h		diff \| blob \| history
include/atomprop.h		diff \| blob \| history
include/bondf.h		diff \| blob \| history
include/calcgrid.h		diff \| blob \| history
include/calch.h		diff \| blob \| history
include/calcmu.h		diff \| blob \| history
include/chargegroup.h		diff \| blob \| history
include/checkpoint.h		diff \| blob \| history
include/confio.h		diff \| blob \| history
include/constr.h		diff \| blob \| history
include/copyrite.h		diff \| blob \| history
include/coulomb.h		diff \| blob \| history
include/disre.h		diff \| blob \| history
include/do_fit.h		diff \| blob \| history
include/domdec.h		diff \| blob \| history
include/domdec_network.h		diff \| blob \| history
include/ebin.h		diff \| blob \| history
include/edsam.h		diff \| blob \| history
include/enxio.h		diff \| blob \| history
include/ffscanf.h		diff \| blob \| history
include/filenm.h		diff \| blob \| history
include/force.h		diff \| blob \| history
include/futil.h		diff \| blob \| history
include/gbutil.h		diff \| blob \| history
include/gen_ad.h		diff \| blob \| history
include/genborn.h		diff \| blob \| history
include/gmx_ana.h		diff \| blob \| history
include/gmx_arpack.h		diff \| blob \| history
include/gmx_avx_double.h		diff \| blob \| history
include/gmx_avx_single.h		diff \| blob \| history
include/gmx_blas.h		diff \| blob \| history
include/gmx_cpuid.h		diff \| blob \| history
include/gmx_cyclecounter.h		diff \| blob \| history
include/gmx_fatal.h		diff \| blob \| history
include/gmx_fatal_collective.h		diff \| blob \| history
include/gmx_fft.h		diff \| blob \| history
include/gmx_ga2la.h		diff \| blob \| history
include/gmx_hash.h		diff \| blob \| history
include/gmx_lapack.h		diff \| blob \| history
include/gmx_math_x86_avx_128_fma_double.h		diff \| blob \| history
include/gmx_math_x86_avx_128_fma_single.h		diff \| blob \| history
include/gmx_math_x86_avx_256_double.h		diff \| blob \| history
include/gmx_math_x86_avx_256_single.h		diff \| blob \| history
include/gmx_math_x86_sse2_double.h		diff \| blob \| history
include/gmx_math_x86_sse2_single.h		diff \| blob \| history
include/gmx_math_x86_sse4_1_double.h		diff \| blob \| history
include/gmx_math_x86_sse4_1_single.h		diff \| blob \| history
include/gmx_matrix.h		diff \| blob \| history
include/gmx_omp_nthreads.h		diff \| blob \| history
include/gmx_parallel_3dfft.h		diff \| blob \| history
include/gmx_random.h		diff \| blob \| history
include/gmx_simd_macros.h		diff \| blob \| history
include/gmx_sort.h		diff \| blob \| history
include/gmx_statistics.h		diff \| blob \| history
include/gmx_system_xdr.h		diff \| blob \| history
include/gmx_thread_affinity.h		diff \| blob \| history
include/gmx_wallcycle.h		diff \| blob \| history
include/gmx_x86_avx_128_fma.h		diff \| blob \| history
include/gmx_x86_avx_256.h		diff \| blob \| history
include/gmx_x86_simd_double.h		diff \| blob \| history
include/gmx_x86_simd_single.h		diff \| blob \| history
include/gmx_x86_sse2.h		diff \| blob \| history
include/gmx_x86_sse4_1.h		diff \| blob \| history
include/gmxcomplex.h		diff \| blob \| history
include/gmxcpp.h		diff \| blob \| history
include/gmxfio.h		diff \| blob \| history
include/gpp_atomtype.h		diff \| blob \| history
include/gpp_nextnb.h		diff \| blob \| history
include/gpu_utils.h		diff \| blob \| history
include/grompp.h		diff \| blob \| history
include/gstat.h		diff \| blob \| history
include/hackblock.h		diff \| blob \| history
include/histogram.h		diff \| blob \| history
include/index.h		diff \| blob \| history
include/indexutil.h		diff \| blob \| history
include/invblock.h		diff \| blob \| history
include/macros.h		diff \| blob \| history
include/main.h		diff \| blob \| history
include/mainpage.h		diff \| blob \| history
include/maths.h		diff \| blob \| history
include/matio.h		diff \| blob \| history
include/md5.h		diff \| blob \| history
include/md_logging.h		diff \| blob \| history
include/md_support.h		diff \| blob \| history
include/mdatoms.h		diff \| blob \| history
include/mdebin.h		diff \| blob \| history
include/mdrun.h		diff \| blob \| history
include/mpelogging.h		diff \| blob \| history
include/mshift.h		diff \| blob \| history
include/mtop_util.h		diff \| blob \| history
include/mtxio.h		diff \| blob \| history
include/mvdata.h		diff \| blob \| history
include/names.h		diff \| blob \| history
include/nbnxn_cuda_data_mgmt.h		diff \| blob \| history
include/network.h		diff \| blob \| history
include/nonbonded.h		diff \| blob \| history
include/nrama.h		diff \| blob \| history
include/nrjac.h		diff \| blob \| history
include/nrnb.h		diff \| blob \| history
include/ns.h		diff \| blob \| history
include/nsgrid.h		diff \| blob \| history
include/oenv.h		diff \| blob \| history
include/orires.h		diff \| blob \| history
include/partdec.h		diff \| blob \| history
include/pbc.h		diff \| blob \| history
include/pdb2top.h		diff \| blob \| history
include/pdbio.h		diff \| blob \| history
include/perf_est.h		diff \| blob \| history
include/physics.h		diff \| blob \| history
include/pmalloc_cuda.h		diff \| blob \| history
include/pme.h		diff \| blob \| history
include/princ.h		diff \| blob \| history
include/pull.h		diff \| blob \| history
include/pull_rotation.h		diff \| blob \| history
include/qmmm.h		diff \| blob \| history
include/random.h		diff \| blob \| history
include/rbin.h		diff \| blob \| history
include/readinp.h		diff \| blob \| history
include/resall.h		diff \| blob \| history
include/rmpbc.h		diff \| blob \| history
include/selection.h		diff \| blob \| history
include/selmethod.h		diff \| blob \| history
include/selvalue.h		diff \| blob \| history
include/sfactor.h		diff \| blob \| history
include/shellfc.h		diff \| blob \| history
include/shift.h		diff \| blob \| history
include/sighandler.h		diff \| blob \| history
include/sim_util.h		diff \| blob \| history
include/smalloc.h		diff \| blob \| history
include/sortwater.h		diff \| blob \| history
include/sparsematrix.h		diff \| blob \| history
include/split.h		diff \| blob \| history
include/splitter.h		diff \| blob \| history
include/statutil.h		diff \| blob \| history
include/strdb.h		diff \| blob \| history
include/string2.h		diff \| blob \| history
include/symtab.h		diff \| blob \| history
include/sysstuff.h		diff \| blob \| history
include/tables.h		diff \| blob \| history
include/tgroup.h		diff \| blob \| history
include/thread_mpi.h		diff \| blob \| history
include/thread_mpi/atomic.h		diff \| blob \| history
include/thread_mpi/atomic/cycles.h		diff \| blob \| history
include/thread_mpi/atomic/gcc.h		diff \| blob \| history
include/thread_mpi/atomic/gcc_ia64.h		diff \| blob \| history
include/thread_mpi/atomic/gcc_intrinsics.h		diff \| blob \| history
include/thread_mpi/atomic/gcc_ppc.h		diff \| blob \| history
include/thread_mpi/atomic/gcc_spinlock.h		diff \| blob \| history
include/thread_mpi/atomic/gcc_x86.h		diff \| blob \| history
include/thread_mpi/atomic/msvc.h		diff \| blob \| history
include/thread_mpi/atomic/suncc-sparc.h		diff \| blob \| history
include/thread_mpi/atomic/xlc_ppc.h		diff \| blob \| history
include/thread_mpi/barrier.h		diff \| blob \| history
include/thread_mpi/collective.h		diff \| blob \| history
include/thread_mpi/event.h		diff \| blob \| history
include/thread_mpi/hwinfo.h		diff \| blob \| history
include/thread_mpi/list.h		diff \| blob \| history
include/thread_mpi/lock.h		diff \| blob \| history
include/thread_mpi/mpi_bindings.h		diff \| blob \| history
include/thread_mpi/mutex.h		diff \| blob \| history
include/thread_mpi/numa_malloc.h		diff \| blob \| history
include/thread_mpi/system_error.h		diff \| blob \| history
include/thread_mpi/threads.h		diff \| blob \| history
include/thread_mpi/tmpi.h		diff \| blob \| history
include/thread_mpi/visibility.h		diff \| blob \| history
include/thread_mpi/wait.h		diff \| blob \| history
include/tmpi.h		diff \| blob \| history
include/topsort.h		diff \| blob \| history
include/toputil.h		diff \| blob \| history
include/tpxio.h		diff \| blob \| history
include/trajana.h		diff \| blob \| history
include/trnio.h		diff \| blob \| history
include/txtdump.h		diff \| blob \| history
include/typedefs.h		diff \| blob \| history
include/types/atoms.h		diff \| blob \| history
include/types/block.h		diff \| blob \| history
include/types/commrec.h		diff \| blob \| history
include/types/energy.h		diff \| blob \| history
include/types/enums.h		diff \| blob \| history
include/types/fcdata.h		diff \| blob \| history
include/types/filenm.h		diff \| blob \| history
include/types/force_flags.h		diff \| blob \| history
include/types/forcerec.h		diff \| blob \| history
include/types/genborn.h		diff \| blob \| history
include/types/globsig.h		diff \| blob \| history
include/types/graph.h		diff \| blob \| history
include/types/group.h		diff \| blob \| history
include/types/hw_info.h		diff \| blob \| history
include/types/idef.h		diff \| blob \| history
include/types/ifunc.h		diff \| blob \| history
include/types/inputrec.h		diff \| blob \| history
include/types/interaction_const.h		diff \| blob \| history
include/types/ishift.h		diff \| blob \| history
include/types/iteratedconstraints.h		diff \| blob \| history
include/types/matrix.h		diff \| blob \| history
include/types/mdatom.h		diff \| blob \| history
include/types/nb_verlet.h		diff \| blob \| history
include/types/nblist.h		diff \| blob \| history
include/types/nbnxn_cuda_types_ext.h		diff \| blob \| history
include/types/nbnxn_pairlist.h		diff \| blob \| history
include/types/nlistheuristics.h		diff \| blob \| history
include/types/nrnb.h		diff \| blob \| history
include/types/ns.h		diff \| blob \| history
include/types/nsgrid.h		diff \| blob \| history
include/types/oenv.h		diff \| blob \| history
include/types/pbc.h		diff \| blob \| history
include/types/qmmmrec.h		diff \| blob \| history
include/types/simple.h		diff \| blob \| history
include/types/state.h		diff \| blob \| history
include/types/symtab.h		diff \| blob \| history
include/types/topology.h		diff \| blob \| history
include/types/trx.h		diff \| blob \| history
include/update.h		diff \| blob \| history
include/vcm.h		diff \| blob \| history
include/vec.h		diff \| blob \| history
include/viewit.h		diff \| blob \| history
include/visibility.h		diff \| blob \| history
include/vsite.h		diff \| blob \| history
include/warninp.h		diff \| blob \| history
include/wgms.h		diff \| blob \| history
include/wman.h		diff \| blob \| history
include/writeps.h		diff \| blob \| history
include/xdrf.h		diff \| blob \| history
include/xtcio.h		diff \| blob \| history
include/xvgr.h		diff \| blob \| history
src/gmxlib/3dview.c		diff \| blob \| history
src/gmxlib/atomprop.c		diff \| blob \| history
src/gmxlib/bondfree.c		diff \| blob \| history
src/gmxlib/calcgrid.c		diff \| blob \| history
src/gmxlib/calch.c		diff \| blob \| history
src/gmxlib/chargegroup.c		diff \| blob \| history
src/gmxlib/checkpoint.c		diff \| blob \| history
src/gmxlib/cinvsqrtdata.c		diff \| blob \| history
src/gmxlib/confio.c		diff \| blob \| history
src/gmxlib/copyrite.c		diff \| blob \| history
src/gmxlib/crecipdata.c		diff \| blob \| history
src/gmxlib/debugb.h		diff \| blob \| history
src/gmxlib/disre.c		diff \| blob \| history
src/gmxlib/dlb.h		diff \| blob \| history
src/gmxlib/do_fit.c		diff \| blob \| history
src/gmxlib/enxio.c		diff \| blob \| history
src/gmxlib/ewald_util.c		diff \| blob \| history
src/gmxlib/ffscanf.c		diff \| blob \| history
src/gmxlib/filenm.c		diff \| blob \| history
src/gmxlib/futil.c		diff \| blob \| history
src/gmxlib/gbutil.c		diff \| blob \| history
src/gmxlib/gmx_arpack.c		diff \| blob \| history
src/gmxlib/gmx_cpuid.c		diff \| blob \| history
src/gmxlib/gmx_cyclecounter.c		diff \| blob \| history
src/gmxlib/gmx_detect_hardware.c		diff \| blob \| history
src/gmxlib/gmx_fatal.c		diff \| blob \| history
src/gmxlib/gmx_matrix.c		diff \| blob \| history
src/gmxlib/gmx_omp.c		diff \| blob \| history
src/gmxlib/gmx_omp_nthreads.c		diff \| blob \| history
src/gmxlib/gmx_random.c		diff \| blob \| history
src/gmxlib/gmx_random_gausstable.h		diff \| blob \| history
src/gmxlib/gmx_sort.c		diff \| blob \| history
src/gmxlib/gmx_system_xdr.c		diff \| blob \| history
src/gmxlib/gmx_thread_affinity.c		diff \| blob \| history
src/gmxlib/gmxcpp.c		diff \| blob \| history
src/gmxlib/gmxfio.c		diff \| blob \| history
src/gmxlib/gmxfio_asc.c		diff \| blob \| history
src/gmxlib/gmxfio_bin.c		diff \| blob \| history
src/gmxlib/gmxfio_int.h		diff \| blob \| history
src/gmxlib/gmxfio_rw.c		diff \| blob \| history
src/gmxlib/gmxfio_xdr.c		diff \| blob \| history
src/gmxlib/gpu_utils/dummy.cpp		diff \| blob \| history
src/gmxlib/gpu_utils/memtestG80_core.h		diff \| blob \| history
src/gmxlib/ifunc.c		diff \| blob \| history
src/gmxlib/index.c		diff \| blob \| history
src/gmxlib/inputrec.c		diff \| blob \| history
src/gmxlib/invblock.c		diff \| blob \| history
src/gmxlib/invsqrt_test.c		diff \| blob \| history
src/gmxlib/libxdrf.c		diff \| blob \| history
src/gmxlib/main.c		diff \| blob \| history
src/gmxlib/maths.c		diff \| blob \| history
src/gmxlib/matio.c		diff \| blob \| history
src/gmxlib/md5.c		diff \| blob \| history
src/gmxlib/md_logging.c		diff \| blob \| history
src/gmxlib/minvert.h		diff \| blob \| history
src/gmxlib/molfile_plugin.h		diff \| blob \| history
src/gmxlib/mshift.c		diff \| blob \| history
src/gmxlib/mtop_util.c		diff \| blob \| history
src/gmxlib/mtxio.c		diff \| blob \| history
src/gmxlib/mvdata.c		diff \| blob \| history
src/gmxlib/names.c		diff \| blob \| history
src/gmxlib/network.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_free_energy.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_free_energy.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_generic.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_generic.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_generic_adress.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_generic_adress.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_generic_cg.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_generic_cg.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_128_fma_double/kernelutil_x86_avx_128_fma_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_128_fma_double/nb_kernel_avx_128_fma_double.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_128_fma_double/nb_kernel_avx_128_fma_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_128_fma_single/kernelutil_x86_avx_128_fma_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_128_fma_single/nb_kernel_avx_128_fma_single.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_128_fma_single/nb_kernel_avx_128_fma_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_256_double/kernelutil_x86_avx_256_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_256_double/nb_kernel_avx_256_double.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_256_double/nb_kernel_avx_256_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_256_single/kernelutil_x86_avx_256_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_256_single/nb_kernel_avx_256_single.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_avx_256_single/nb_kernel_avx_256_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse2_double/kernelutil_x86_sse2_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse2_double/nb_kernel_sse2_double.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse2_double/nb_kernel_sse2_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse2_single/kernelutil_x86_sse2_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse2_single/nb_kernel_sse2_single.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse2_single/nb_kernel_sse2_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse4_1_double/kernelutil_x86_sse4_1_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse4_1_double/nb_kernel_sse4_1_double.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse4_1_double/nb_kernel_sse4_1_double.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse4_1_single/kernelutil_x86_sse4_1_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse4_1_single/nb_kernel_sse4_1_single.c		diff \| blob \| history
src/gmxlib/nonbonded/nb_kernel_sse4_1_single/nb_kernel_sse4_1_single.h		diff \| blob \| history
src/gmxlib/nonbonded/nonbonded.c		diff \| blob \| history
src/gmxlib/nrama.c		diff \| blob \| history
src/gmxlib/nrjac.c		diff \| blob \| history
src/gmxlib/nrnb.c		diff \| blob \| history
src/gmxlib/oenv.c		diff \| blob \| history
src/gmxlib/orires.c		diff \| blob \| history
src/gmxlib/pargs.c		diff \| blob \| history
src/gmxlib/pbc.c		diff \| blob \| history
src/gmxlib/pdbio.c		diff \| blob \| history
src/gmxlib/princ.c		diff \| blob \| history
src/gmxlib/rando.c		diff \| blob \| history
src/gmxlib/random.c		diff \| blob \| history
src/gmxlib/rbin.c		diff \| blob \| history
src/gmxlib/readinp.c		diff \| blob \| history
src/gmxlib/replace.c		diff \| blob \| history
src/gmxlib/replace.h		diff \| blob \| history
src/gmxlib/rmpbc.c		diff \| blob \| history
src/gmxlib/selection/compiler.c		diff \| blob \| history
src/gmxlib/selection/evaluate.c		diff \| blob \| history
src/gmxlib/selection/evaluate.h		diff \| blob \| history
src/gmxlib/selection/keywords.h		diff \| blob \| history
src/gmxlib/selection/mempool.c		diff \| blob \| history
src/gmxlib/selection/params.c		diff \| blob \| history
src/gmxlib/selection/parsetree.c		diff \| blob \| history
src/gmxlib/selection/parsetree.h		diff \| blob \| history
src/gmxlib/selection/scanner_internal.c		diff \| blob \| history
src/gmxlib/selection/scanner_internal.h		diff \| blob \| history
src/gmxlib/selection/selcollection.h		diff \| blob \| history
src/gmxlib/selection/selection.c		diff \| blob \| history
src/gmxlib/selection/selelem.c		diff \| blob \| history
src/gmxlib/selection/selelem.h		diff \| blob \| history
src/gmxlib/selection/selhelp.c		diff \| blob \| history
src/gmxlib/selection/selmethod.c		diff \| blob \| history
src/gmxlib/selection/sm_compare.c		diff \| blob \| history
src/gmxlib/selection/sm_distance.c		diff \| blob \| history
src/gmxlib/selection/sm_insolidangle.c		diff \| blob \| history
src/gmxlib/selection/sm_keywords.c		diff \| blob \| history
src/gmxlib/selection/sm_merge.c		diff \| blob \| history
src/gmxlib/selection/sm_permute.c		diff \| blob \| history
src/gmxlib/selection/sm_position.c		diff \| blob \| history
src/gmxlib/selection/sm_same.c		diff \| blob \| history
src/gmxlib/selection/sm_simple.c		diff \| blob \| history
src/gmxlib/selection/symrec.c		diff \| blob \| history
src/gmxlib/selection/test_selection.c		diff \| blob \| history
src/gmxlib/sfactor.c		diff \| blob \| history
src/gmxlib/shift_util.c		diff \| blob \| history
src/gmxlib/sighandler.c		diff \| blob \| history
src/gmxlib/smalloc.c		diff \| blob \| history
src/gmxlib/sortwater.c		diff \| blob \| history
src/gmxlib/sparsematrix.c		diff \| blob \| history
src/gmxlib/splitter.c		diff \| blob \| history
src/gmxlib/statistics/gmx_statistics.c		diff \| blob \| history
src/gmxlib/statistics/gmx_statistics_test.c		diff \| blob \| history
src/gmxlib/statistics/histogram.c		diff \| blob \| history
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src/tools/gmx_anaeig.c		diff \| blob \| history
src/tools/gmx_analyze.c		diff \| blob \| history
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src/tools/gmx_confrms.c		diff \| blob \| history
src/tools/gmx_covar.c		diff \| blob \| history
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src/tools/gmx_dielectric.c		diff \| blob \| history
src/tools/gmx_dipoles.c		diff \| blob \| history
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src/tools/gmx_do_dssp.c		diff \| blob \| history
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src/tools/gmx_dyecoupl.c		diff \| blob \| history
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