Merge branch release-5-1 into master
authorTeemu Murtola <teemu.murtola@gmail.com>
Sat, 3 Oct 2015 17:20:51 +0000 (20:20 +0300)
committerTeemu Murtola <teemu.murtola@gmail.com>
Sat, 3 Oct 2015 17:20:51 +0000 (20:20 +0300)
commit92f299d6bdbe68c4e8bd0a3f8b943c625f452e87
treefe6bc88ec235006f898f7b92eacf50a8372e419b
parentf62c03d80a8726f2271f6bf86e6bce7483f8c3de
parente081d6331ebc02f81f344a0353659303e5db7a9e
Merge branch release-5-1 into master

Conflicts:
  src/gromacs/legacyheaders/force.h
  src/programs/mdrun/resource-division.h
   - Took versions from release-5-1, and added struct keywords.
  src/gromacs/selection/selectioncollection.cpp
  src/gromacs/selection/selectioncollection.h
  src/gromacs/selection/selectionoptionmanager.h
   - Replaced Options with IOptionsContainer (also in
     selectionoptionmanager.cpp).
  src/gromacs/trajectoryanalysis/cmdlinerunner.cpp
   - Changed applied to selectionoptionbehavior.cpp instead.

Change-Id: I6c23ef9cf9454b10f6dbabc9952df6e0497e0f52
12 files changed:
src/gromacs/gmxpreprocess/readir.cpp
src/gromacs/legacyheaders/force.h
src/gromacs/mdlib/forcerec.cpp
src/gromacs/selection/selectioncollection.cpp
src/gromacs/selection/selectioncollection.h
src/gromacs/selection/selectionoptionbehavior.cpp
src/gromacs/selection/selectionoptionmanager.cpp
src/gromacs/selection/selectionoptionmanager.h
src/programs/mdrun/md.cpp
src/programs/mdrun/resource-division.cpp
src/programs/mdrun/resource-division.h
src/programs/mdrun/runner.cpp