More headers out of legacyheaders
authorTeemu Murtola <teemu.murtola@gmail.com>
Sun, 27 Sep 2015 05:49:05 +0000 (08:49 +0300)
committerGerrit Code Review <gerrit@gerrit.gromacs.org>
Sun, 27 Sep 2015 13:21:53 +0000 (15:21 +0200)
commite6559741e42c37cda189f2293375fa62db058899
treec8057946370604fb78804a92e0c9df1dc12b10ab
parentd2b2095b23fad9f3595716fa7b61a3843f357525
More headers out of legacyheaders

Change-Id: I38ce8fd62a1c969814c85d112c30eeaa80f7980a
51 files changed:
docs/doxygen/cycle-suppressions.txt
src/gromacs/ewald/pme-load-balancing.cpp
src/gromacs/fileio/trxio.cpp
src/gromacs/fileio/trxio.h
src/gromacs/gmxana/gmx_analyze.cpp
src/gromacs/gmxana/gmx_make_edi.cpp
src/gromacs/gmxana/gmx_pme_error.cpp
src/gromacs/gmxana/gmx_sham.cpp
src/gromacs/gmxana/gmx_tune_pme.cpp
src/gromacs/gmxana/gmx_xpm2ps.cpp
src/gromacs/gmxlib/gmx_detect_hardware.cpp
src/gromacs/gmxlib/gmx_omp_nthreads.cpp
src/gromacs/gmxlib/gmx_thread_affinity.cpp
src/gromacs/gmxlib/md_logging.cpp
src/gromacs/gmxlib/md_logging.h [moved from src/gromacs/legacyheaders/md_logging.h with 87% similarity]
src/gromacs/gmxlib/readinp.cpp
src/gromacs/gmxlib/readinp.h [moved from src/gromacs/legacyheaders/readinp.h with 94% similarity]
src/gromacs/gmxlib/warninp.cpp
src/gromacs/gmxlib/warninp.h [moved from src/gromacs/legacyheaders/warninp.h with 95% similarity]
src/gromacs/gmxpreprocess/genconf.cpp
src/gromacs/gmxpreprocess/grompp.cpp
src/gromacs/gmxpreprocess/nm2type.cpp
src/gromacs/gmxpreprocess/pdb2gmx.cpp
src/gromacs/gmxpreprocess/readir.cpp
src/gromacs/gmxpreprocess/readir.h
src/gromacs/gmxpreprocess/readpull.cpp
src/gromacs/gmxpreprocess/topio.cpp
src/gromacs/gmxpreprocess/toppush.cpp
src/gromacs/gmxpreprocess/toppush.h
src/gromacs/gmxpreprocess/x2top.cpp
src/gromacs/mdlib/force.cpp
src/gromacs/mdlib/forcerec.cpp
src/gromacs/mdlib/md_support.cpp
src/gromacs/mdlib/md_support.h [moved from src/gromacs/legacyheaders/md_support.h with 94% similarity]
src/gromacs/mdlib/mdatoms.cpp
src/gromacs/mdlib/mdrun_signalling.cpp
src/gromacs/mdlib/minimize.cpp
src/gromacs/mdlib/qm_gamess.cpp
src/gromacs/mdlib/qm_gaussian.cpp
src/gromacs/mdlib/qm_mopac.cpp
src/gromacs/mdlib/qm_orca.cpp
src/gromacs/mdlib/qmmm.cpp
src/gromacs/mdlib/qmmm.h [moved from src/gromacs/legacyheaders/qmmm.h with 97% similarity]
src/gromacs/mdlib/sim_util.cpp
src/gromacs/mdlib/stat.cpp
src/gromacs/timing/wallcycle.cpp
src/programs/mdrun/md.cpp
src/programs/mdrun/mdrun.cpp
src/programs/mdrun/membed.cpp
src/programs/mdrun/resource-division.cpp
src/programs/mdrun/runner.cpp