X-Git-Url: http://biod.pnpi.spb.ru/gitweb/?a=blobdiff_plain;f=src%2Fgromacs%2Ftools%2Fcheck.c;h=63fd7cffb1febdc80b25167c62ccd43ce9f83400;hb=b2b75d45c43c98cf1362e0125381bfc6f0a85782;hp=ceb5ec21735ed19b3816d8c562e574892b595989;hpb=cb466e44535ac45f2ee8341dcae39207b5813abe;p=alexxy%2Fgromacs.git diff --git a/src/gromacs/tools/check.c b/src/gromacs/tools/check.c index ceb5ec2173..63fd7cffb1 100644 --- a/src/gromacs/tools/check.c +++ b/src/gromacs/tools/check.c @@ -708,8 +708,8 @@ void chk_enx(const char *fn) int gmx_check(int argc, char *argv[]) { const char *desc[] = { - "[THISMODULE] reads a trajectory ([TT].trj[tt], [TT].trr[tt] or ", - "[TT].xtc[tt]), an energy file ([TT].ene[tt] or [TT].edr[tt])", + "[THISMODULE] reads a trajectory ([TT].tng[tt], [TT].trr[tt] or ", + "[TT].xtc[tt]), an energy file ([TT].edr[tt])", "or an index file ([TT].ndx[tt])", "and prints out useful information about them.[PAR]", "Option [TT]-c[tt] checks for presence of coordinates,", @@ -725,8 +725,8 @@ int gmx_check(int argc, char *argv[]) "file are indeed correct in the trajectory. If not you may have", "non-matching files due to e.g. deshuffling or due to problems with", "virtual sites. With these flags, [TT]gmx check[tt] provides a quick check for such problems.[PAR]", - "The program can compare two run input ([TT].tpr[tt], [TT].tpb[tt] or", - "[TT].tpa[tt]) files", + "The program can compare two run input ([TT].tpr[tt])", + "files", "when both [TT]-s1[tt] and [TT]-s2[tt] are supplied.", "Similarly a pair of trajectory files can be compared (using the [TT]-f2[tt]", "option), or a pair of energy files (using the [TT]-e2[tt] option).[PAR]", @@ -738,8 +738,8 @@ int gmx_check(int argc, char *argv[]) t_filenm fnm[] = { { efTRX, "-f", NULL, ffOPTRD }, { efTRX, "-f2", NULL, ffOPTRD }, - { efTPX, "-s1", "top1", ffOPTRD }, - { efTPX, "-s2", "top2", ffOPTRD }, + { efTPR, "-s1", "top1", ffOPTRD }, + { efTPR, "-s2", "top2", ffOPTRD }, { efTPS, "-c", NULL, ffOPTRD }, { efEDR, "-e", NULL, ffOPTRD }, { efEDR, "-e2", "ener2", ffOPTRD }, @@ -796,7 +796,7 @@ int gmx_check(int argc, char *argv[]) } else if (fn2) { - fprintf(stderr, "Please give me TWO trajectory (.xtc/.trr/.trj) files!\n"); + fprintf(stderr, "Please give me TWO trajectory (.xtc/.trr/.tng) files!\n"); } fn1 = opt2fn_null("-s1", NFILE, fnm); @@ -819,7 +819,7 @@ int gmx_check(int argc, char *argv[]) } else if ((fn1 && !opt2fn_null("-f", NFILE, fnm)) || (!fn1 && fn2)) { - fprintf(stderr, "Please give me TWO run input (.tpr/.tpa/.tpb) files\n" + fprintf(stderr, "Please give me TWO run input (.tpr) files\n" "or specify the -m flag to generate a methods.tex file\n"); }