More minor formatting/editorial fixes for the manual.

[alexxy/gromacs.git] / src / tools / gmx_sham.c

diff --git a/src/tools/gmx_sham.c b/src/tools/gmx_sham.c
index 15f6f21a88140bee94dcfb48f5a0fcf86c9fb188..066c2ce07cfc084219467f94868abfbc9f3a1da0 100644 (file)
--- a/src/tools/gmx_sham.c
+++ b/src/tools/gmx_sham.c
@@ -679,9 +679,9 @@ int gmx_sham(int argc,char *argv[])
   const char *desc[] = {
     "g_sham makes multi-dimensional free-energy, enthalpy and entropy plots.",
     "g_sham reads one or more xvg files and analyzes data sets.",
-    "g_sham basic purpose is plotting Gibbs free energy landscapes",
+    "The basic purpose of g_sham is to plot Gibbs free energy landscapes",
     "(option [TT]-ls[tt])",
-    "by Bolzmann inverting multi-dimensional histograms (option [TT]-lp[tt])",
+    "by Bolzmann inverting multi-dimensional histograms (option [TT]-lp[tt]),",
     "but it can also",
     "make enthalpy (option [TT]-lsh[tt]) and entropy (option [TT]-lss[tt])",
     "plots. The histograms can be made for any quantities the user supplies.",
@@ -699,12 +699,12 @@ int gmx_sham(int argc,char *argv[])
     "[PAR]",
     "Option [TT]-ene[tt] can be used to supply a file with energies.",
     "These energies are used as a weighting function in the single",
-    "histogram analysis method due to Kumar et. al. When also temperatures",
-    "are supplied (as a second column in the file) an experimental",
+    "histogram analysis method by Kumar et. al. When temperatures",
+    "are supplied (as a second column in the file), an experimental",
     "weighting scheme is applied. In addition the vales",
     "are used for making enthalpy and entropy plots.",
     "[PAR]",
-    "With option [TT]-dim[tt] dimensions can be gives for distances.",
+    "With option [TT]-dim[tt], dimensions can be gives for distances.",
     "When a distance is 2- or 3-dimensional, the circumference or surface",
     "sampled by two particles increases with increasing distance.",
     "Depending on what one would like to show, one can choose to correct",
@@ -713,7 +713,7 @@ int gmx_sham(int argc,char *argv[])
     "respectively.",
     "A value of -1 is used to indicate an angle in degrees between two",
     "vectors: a sin(angle) normalization will be applied.",
-    "Note that for angles between vectors the inner-product or cosine",
+    "[BB]Note[bb] that for angles between vectors the inner-product or cosine",
     "is the natural quantity to use, as it will produce bins of the same",
     "volume."
   };