Redefine the default boolean type to gmx_bool.

[alexxy/gromacs.git] / src / tools / gmx_mindist.c

diff --git a/src/tools/gmx_mindist.c b/src/tools/gmx_mindist.c
index 1d707f7b05e57dcc33039809b26aa34fe89c0e80..477d216083f51259c1a70272b07011dcf13270be 100644 (file)
--- a/src/tools/gmx_mindist.c
+++ b/src/tools/gmx_mindist.c
@@ -103,7 +103,7 @@ static void periodic_dist(matrix box,rvec x[],int n,atom_id index[],
 
 static void periodic_mindist_plot(const char *trxfn,const char *outfn,
                                  t_topology *top,int ePBC,
-                                 int n,atom_id index[],bool bSplit,
+                                 int n,atom_id index[],gmx_bool bSplit,
                                   const output_env_t oenv)
 {
   FILE   *out;
@@ -114,7 +114,7 @@ static void periodic_mindist_plot(const char *trxfn,const char *outfn,
   matrix box;
   int    natoms,ind_min[2]={0,0},ind_mini=0,ind_minj=0;
   real   r,rmin,rmax,rmint,tmint;
-  bool   bFirst;
+  gmx_bool   bFirst;
   gmx_rmpbc_t  gpbc=NULL;
 
   natoms=read_first_x(oenv,&status,trxfn,&t,&x,box);
@@ -164,9 +164,9 @@ static void periodic_mindist_plot(const char *trxfn,const char *outfn,
          index[ind_mini]+1,index[ind_minj]+1);
 }
 
-static void calc_dist(real rcut, bool bPBC, int ePBC, matrix box, rvec x[], 
+static void calc_dist(real rcut, gmx_bool bPBC, int ePBC, matrix box, rvec x[], 
                      int nx1,int nx2, atom_id index1[], atom_id index2[],
-                     bool bGroup,
+                     gmx_bool bGroup,
                      real *rmin, real *rmax, int *nmin, int *nmax,
                      int *ixmin, int *jxmin, int *ixmax, int *jxmax)
 {
@@ -252,10 +252,10 @@ static void calc_dist(real rcut, bool bPBC, int ePBC, matrix box, rvec x[],
 
 void dist_plot(const char *fn,const char *afile,const char *dfile,
               const char *nfile,const char *rfile,const char *xfile,
-              real rcut,bool bMat,t_atoms *atoms,
-              int ng,atom_id *index[],int gnx[],char *grpn[],bool bSplit,
-              bool bMin, int nres, atom_id *residue,bool bPBC,int ePBC,
-              bool bGroup,bool bEachResEachTime, bool bPrintResName,
+              real rcut,gmx_bool bMat,t_atoms *atoms,
+              int ng,atom_id *index[],int gnx[],char *grpn[],gmx_bool bSplit,
+              gmx_bool bMin, int nres, atom_id *residue,gmx_bool bPBC,int ePBC,
+              gmx_bool bGroup,gmx_bool bEachResEachTime, gmx_bool bPrintResName,
                const output_env_t oenv)
 {
   FILE         *atm,*dist,*num;
@@ -271,7 +271,7 @@ void dist_plot(const char *fn,const char *afile,const char *dfile,
   rvec         *x0;
   matrix       box;
   t_trxframe   frout;
-  bool         bFirst;
+  gmx_bool         bFirst;
   FILE *respertime=NULL;
   
   if ((natoms=read_first_x(oenv,&status,fn,&t,&x0,box))==0)
@@ -503,11 +503,11 @@ int gmx_mindist(int argc,char *argv[])
     "The [TT]-pi[tt] option is very slow."
   };
   
-  static bool bMat=FALSE,bPI=FALSE,bSplit=FALSE,bMax=FALSE,bPBC=TRUE;
-  static bool bGroup=FALSE;
+  static gmx_bool bMat=FALSE,bPI=FALSE,bSplit=FALSE,bMax=FALSE,bPBC=TRUE;
+  static gmx_bool bGroup=FALSE;
   static real rcutoff=0.6;
   static int  ng=1;
-  static bool bEachResEachTime=FALSE,bPrintResName=FALSE;
+  static gmx_bool bEachResEachTime=FALSE,bPrintResName=FALSE;
   t_pargs pa[] = {
     { "-matrix", FALSE, etBOOL, {&bMat},
       "Calculate half a matrix of group-group distances" },
@@ -537,7 +537,7 @@ int gmx_mindist(int argc,char *argv[])
   real       t;
   rvec       *x;
   matrix     box;
-  bool       bTop=FALSE;
+  gmx_bool       bTop=FALSE;
   
   FILE      *atm;
   int       i,j,nres=0;