Tons of tiny changes to documentation. Manual looks prettier now.

[alexxy/gromacs.git] / src / tools / gmx_mdmat.c

diff --git a/src/tools/gmx_mdmat.c b/src/tools/gmx_mdmat.c
index c97af48078a0d3c8e8d0d61f39bbe6e11bb88929..bf8522e150241b32e8ee261c1dce49f0df8dc9d3 100644 (file)
--- a/src/tools/gmx_mdmat.c
+++ b/src/tools/gmx_mdmat.c
@@ -152,11 +152,10 @@ int gmx_mdmat(int argc,char *argv[])
 {
   const char *desc[] = {
     "g_mdmat makes distance matrices consisting of the smallest distance",
-    "between residue pairs. With -frames these distance matrices can be",
-    "stored as a function",
-    "of time, to be able to see differences in tertiary structure as a",
-    "funcion of time. If you choose your options unwise, this may generate",
-    "a large output file. Default only an averaged matrix over the whole",
+    "between residue pairs. With [TT]-frames[tt], these distance matrices can be",
+    "stored in order to see differences in tertiary structure as a",
+    "function of time. If you choose your options unwisely, this may generate",
+    "a large output file. By default, only an averaged matrix over the whole",
     "trajectory is output.",
     "Also a count of the number of different atomic contacts between",
     "residues over the whole trajectory can be made.",