"directions require a second index group of the same size, containing",
"the heavy atom in each residue that should represent the sidechain.[PAR]",
"Note that this program does not do any fitting of structures.[PAR]",
- "We need four Calpha coordinates to define the local direction of the helix",
+ "We need four C-alpha coordinates to define the local direction of the helix",
"axis.[PAR]",
"The tilt/rotation is calculated from Euler rotations, where we define",
"the helix axis as the local X axis, the residues/CA-vector as Y, and the",