Redefine the default boolean type to gmx_bool.

[alexxy/gromacs.git] / src / tools / gmx_analyze.c

diff --git a/src/tools/gmx_analyze.c b/src/tools/gmx_analyze.c
index 70406219373a55d6f82208d9e39a83ef7d24ada9..4ebe8bfe130e4c13d5c9366483d2a6af62839626 100644 (file)
--- a/src/tools/gmx_analyze.c
+++ b/src/tools/gmx_analyze.c
@@ -135,7 +135,7 @@ static void plot_coscont(const char *ccfile,int n,int nset,real **val,
   ffclose(fp);
 }
 
-static void regression_analysis(int n,bool bXYdy,
+static void regression_analysis(int n,gmx_bool bXYdy,
                                 real *x,int nset,real **val)
 {
   real S,chi2,a,b,da,db,r=0;
@@ -330,7 +330,7 @@ static real anal_ee(real *parm,real T,real t)
 
 static void estimate_error(const char *eefile,int nb_min,int resol,int n,
                            int nset, double *av,double *sig,real **val,real dt,
-                           bool bFitAc,bool bSingleExpFit,bool bAllowNegLTCorr,
+                           gmx_bool bFitAc,gmx_bool bSingleExpFit,gmx_bool bAllowNegLTCorr,
                            const output_env_t oenv)
 {
     FILE   *fp;
@@ -614,7 +614,7 @@ static void estimate_error(const char *eefile,int nb_min,int resol,int n,
 }
 
 static void luzar_correl(int nn,real *time,int nset,real **val,real temp,
-                        bool bError,real fit_start,real smooth_tail_start,
+                        gmx_bool bError,real fit_start,real smooth_tail_start,
                          const output_env_t oenv)
 {
   const real tol = 1e-8;
@@ -687,7 +687,7 @@ static void filter(real flen,int n,int nset,real **val,real dt,
   sfree(filt);
 }
 
-static void do_fit(FILE *out,int n,bool bYdy,int ny,real *x0,real **val,
+static void do_fit(FILE *out,int n,gmx_bool bYdy,int ny,real *x0,real **val,
                   int npargs,t_pargs *ppa,const output_env_t oenv)
 {
   real *c1=NULL,*sig=NULL,*fitparm;
@@ -773,7 +773,7 @@ static void do_fit(FILE *out,int n,bool bYdy,int ny,real *x0,real **val,
 static void do_ballistic(const char *balFile, int nData,
                          real *t, real **val, int nSet,
                          real balTime, int nBalExp,
-                         bool bDerivative,
+                         gmx_bool bDerivative,
                          const output_env_t oenv)
 {
   double **ctd=NULL, *td=NULL;
@@ -967,9 +967,9 @@ int gmx_analyze(int argc,char *argv[])
     "from [TT]g_hbond -ac[tt], and then the same result should be produced."
   };
   static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1,aver_start=0;
-  static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE;
-  static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE;
-  static bool bIntegrate=FALSE,bRegression=FALSE,bLuzar=FALSE,bLuzarError=FALSE; 
+  static gmx_bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE;
+  static gmx_bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE;
+  static gmx_bool bIntegrate=FALSE,bRegression=FALSE,bLuzar=FALSE,bLuzarError=FALSE; 
   static int  nsets_in=1,d=1,nb_min=4,resol=10, nBalExp=4, nFitPoints=100;
   static real temp=298.15,fit_start=1, fit_end=60, smooth_tail_start=-1, balTime=0.2, diffusion=5e-5,rcut=0.35;