Redefine the default boolean type to gmx_bool.

[alexxy/gromacs.git] / src / tools / gmx_anaeig.c

diff --git a/src/tools/gmx_anaeig.c b/src/tools/gmx_anaeig.c
index f83b36b8ed814e5b92b966c2e5d3f1a1021e7fb4..5d2dc5cc07fb59f47ff5ceb03595825827197c7e 100644 (file)
--- a/src/tools/gmx_anaeig.c
+++ b/src/tools/gmx_anaeig.c
@@ -135,7 +135,7 @@ static void write_xvgr_graphs(const char *file, int ngraphs, int nsetspergraph,
                              const char *title, const char *subtitle,
                              const char *xlabel, const char **ylabel,
                              int n, real *x, real **y, real ***sy,
-                             real scale_x, bool bZero, bool bSplit,
+                             real scale_x, gmx_bool bZero, gmx_bool bSplit,
                               const output_env_t oenv)
 {
   FILE *out;
@@ -295,7 +295,7 @@ compare(int natoms,int n1,rvec **eigvec1,int n2,rvec **eigvec2,
 static void inprod_matrix(const char *matfile,int natoms,
                          int nvec1,int *eignr1,rvec **eigvec1,
                          int nvec2,int *eignr2,rvec **eigvec2,
-                         bool bSelect,int noutvec,int *outvec)
+                         gmx_bool bSelect,int noutvec,int *outvec)
 {
   FILE  *out;
   real  **mat;
@@ -396,12 +396,12 @@ static void overlap(const char *outfile,int natoms,
 static void project(const char *trajfile,t_topology *top,int ePBC,matrix topbox,
                     const char *projfile,const char *twodplotfile,
                     const char *threedplotfile, const char *filterfile,int skip,
-                    const char *extremefile,bool bExtrAll,real extreme,
+                    const char *extremefile,gmx_bool bExtrAll,real extreme,
                     int nextr, t_atoms *atoms,int natoms,atom_id *index,
-                    bool bFit,rvec *xref,int nfit,atom_id *ifit,real *w_rls,
+                    gmx_bool bFit,rvec *xref,int nfit,atom_id *ifit,real *w_rls,
                     real *sqrtm,rvec *xav,
                     int *eignr,rvec **eigvec,
-                    int noutvec,int *outvec, bool bSplit,
+                    int noutvec,int *outvec, gmx_bool bSplit,
                     const output_env_t oenv)
 {
   FILE    *xvgrout=NULL;
@@ -541,7 +541,7 @@ static void project(const char *trajfile,t_topology *top,int ePBC,matrix topbox,
     real    *b=NULL;
     matrix  box;
     char    *resnm,*atnm, pdbform[STRLEN];
-    bool    bPDB, b4D;
+    gmx_bool    bPDB, b4D;
     FILE    *out;
     
     if (noutvec < 3)
@@ -822,7 +822,7 @@ int gmx_anaeig(int argc,char *argv[])
   };
   static int  first=1,last=8,skip=1,nextr=2,nskip=6;
   static real max=0.0,temp=298.15;
-  static bool bSplit=FALSE,bEntropy=FALSE;
+  static gmx_bool bSplit=FALSE,bEntropy=FALSE;
   t_pargs pa[] = {
     { "-first", FALSE, etINT, {&first},     
       "First eigenvector for analysis (-1 is select)" },
@@ -852,7 +852,7 @@ int gmx_anaeig(int argc,char *argv[])
   int        ePBC=-1;
   t_atoms    *atoms=NULL;
   rvec       *xtop,*xref1,*xref2,*xrefp=NULL;
-  bool       bDMR1,bDMA1,bDMR2,bDMA2;
+  gmx_bool       bDMR1,bDMA1,bDMR2,bDMA2;
   int        nvec1,nvec2,*eignr1=NULL,*eignr2=NULL;
   rvec       *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL;
   matrix     topbox;
@@ -870,8 +870,8 @@ int gmx_anaeig(int argc,char *argv[])
   const char *TwoDPlotFile,*ThreeDPlotFile;
   const char *FilterFile,*ExtremeFile;
   const char *OverlapFile,*InpMatFile;
-  bool       bFit1,bFit2,bM,bIndex,bTPS,bTop,bVec2,bProj;
-  bool       bFirstToLast,bFirstLastSet,bTraj,bCompare,bPDB3D;
+  gmx_bool       bFit1,bFit2,bM,bIndex,bTPS,bTop,bVec2,bProj;
+  gmx_bool       bFirstToLast,bFirstLastSet,bTraj,bCompare,bPDB3D;
   real       *eigval1=NULL,*eigval2=NULL;
   int        neig1,neig2;
   double     **xvgdata;